Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 0.0e+00 1154.4 566 100.0
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 5.1e-262 907.5 563 80.1
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 8.7e-254 880.2 546 79.9
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 7.6e-242 840.5 530 79.8
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 2.8e-236 822.0 565 71.7
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 2.9e-233 812.0 570 69.8
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 6.5e-233 810.8 568 71.3
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 4.2e-232 808.1 568 71.7
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 6.7e-230 800.8 568 70.8
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 9.0e-227 790.4 576 67.9
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 9.0e-227 790.4 574 68.6
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 2.0e-226 789.3 570 69.5
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 8.4e-225 783.9 571 68.7
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 7.2e-224 780.8 587 67.8
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 2.7e-223 778.9 587 65.8
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 2.7e-223 778.9 561 69.7
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 1.1e-221 773.5 570 68.4
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 5.7e-221 771.2 566 67.0
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 7.4e-221 770.8 565 67.6
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 2.2e-220 769.2 575 66.6
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 3.1e-219 765.4 565 68.1
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 2.6e-218 762.3 579 66.7
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 1.7e-217 759.6 566 67.0
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 6.5e-217 757.7 572 67.0
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 2.1e-215 752.7 575 65.0
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 7.9e-215 750.7 570 66.8
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 2.3e-214 749.2 571 65.1
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 3.0e-214 748.8 569 65.7
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 5.1e-214 748.0 594 64.1
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 1.1e-213 746.9 572 65.9
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 7.4e-213 744.2 488 73.6
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 2.2e-212 742.7 566 65.0
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 6.3e-212 741.1 569 65.0
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 6.9e-211 737.6 583 64.0
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 6.9e-211 737.6 566 65.0
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 1.2e-210 736.9 573 65.6
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 2.0e-210 736.1 567 65.8
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 2.0e-210 736.1 564 65.8
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 2.6e-210 735.7 574 64.6
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 4.5e-210 734.9 564 66.3
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 5.0e-209 731.5 518 68.5
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 8.5e-209 730.7 570 65.1
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.4e-208 729.9 567 64.0
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 3.2e-208 728.8 567 63.8
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 7.2e-208 727.6 567 64.2
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 7.9e-207 724.2 567 62.1
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 1.5e-205 719.9 568 62.9
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 4.4e-205 718.4 576 63.5
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 5.7e-205 718.0 565 63.5
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 7.4e-205 717.6 572 61.9
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 9.7e-205 717.2 585 63.8
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 1.3e-204 716.8 565 63.0
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 2.2e-204 716.1 570 62.3
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 2.2e-204 716.1 570 64.4
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 1.1e-203 713.8 569 64.0
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 4.1e-203 711.8 565 62.7
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 4.5e-202 708.4 565 62.5
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 1.0e-201 707.2 563 64.3
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 2.2e-201 706.1 569 62.0
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 3.8e-201 705.3 565 62.8
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 3.8e-201 705.3 579 61.7
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 3.8e-201 705.3 552 64.7
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 3.8e-201 705.3 553 64.9
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 4.2e-200 701.8 565 61.8
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 2.3e-198 696.0 569 61.9
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 8.8e-198 694.1 563 60.7
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 2.0e-197 693.0 613 58.6
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 1.3e-196 690.3 565 61.8
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 3.7e-196 688.7 589 60.3
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 6.3e-196 688.0 552 63.2
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 1.8e-195 686.4 565 60.2
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 2.0e-194 682.9 491 67.2
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 4.5e-194 681.8 565 60.0
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 1.7e-193 679.9 531 64.0
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 2.2e-193 679.5 565 60.2
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 4.2e-192 675.2 577 60.1
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 4.7e-191 671.8 630 56.0
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 1.5e-189 666.8 573 58.8
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 4.4e-189 665.2 569 60.3
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 4.8e-188 661.8 627 55.3
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 1.2e-186 657.1 562 58.0
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 1.6e-186 656.8 489 65.4
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 3.5e-186 655.6 514 65.0
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 5.9e-186 654.8 487 64.9
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 7.7e-186 654.4 596 56.9
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 1.7e-185 653.3 562 58.7
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 8.5e-185 651.0 562 58.4
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 5.9e-178 628.2 563 57.9
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 2.3e-177 626.3 494 62.1
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 1.0e-174 617.5 571 57.1
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 3.0e-174 615.9 562 56.2
FvH4_6g53950 Fragaria vesca HOM05D005105 ORTHO05D006244 2.9e-172 609.4 370 77.3
Dinv33309 Davidia involucrata HOM05D005105 ORTHO05D006244 1.0e-161 574.3 405 70.6
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 1.7e-161 573.5 453 65.8
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 3.0e-161 572.8 459 64.3
Hma1.2p1_0093F.1_g046930 Hydrangea macrophylla HOM05D005105 ORTHO05D006244 4.7e-159 565.5 386 69.7
CARHR148130 Cardamine hirsuta HOM05D005105 ORTHO05D006244 9.8e-157 557.8 385 67.5
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 4.9e-156 555.4 537 55.3
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 2.7e-154 549.7 585 50.6
Atru.chr6.2613 Acer truncatum HOM05D005105 ORTHO05D006244 3.5e-154 549.3 347 74.6
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 1.5e-152 543.9 564 53.9
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 5.2e-150 535.4 443 59.8
MD17G1010700 Malus domestica HOM05D005105 ORTHO05D006244 2.2e-148 530.0 348 72.4
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 1.9e-147 526.9 573 50.4
Eucgr.I01623 Eucalyptus grandis HOM05D005105 ORTHO05D006244 2.1e-146 523.5 345 72.5
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 1.2e-143 514.2 544 51.7
CSS0048130 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 2.4e-134 483.4 345 67.2
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 5.1e-129 465.7 412 57.8
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 1.5e-128 464.2 448 50.2
CSS0029044 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 2.1e-127 460.3 322 68.0
Lj5A92G44 Lonicera japonica HOM05D005105 ORTHO05D006244 1.9e-123 447.2 323 67.5
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 3.2e-123 446.4 382 61.5
PGSC0003DMG400013660 Solanum tuberosum HOM05D005105 ORTHO05D006244 5.1e-121 439.1 301 68.8
Sopen02g026870 Solanum pennellii HOM05D005105 ORTHO05D006244 2.4e-118 430.3 301 67.1
HPP92_009891 Vanilla planifolia HOM05D005105 ORTHO05D006244 8.4e-116 421.8 318 63.8
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 1.2e-114 417.9 532 43.0
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 6.0e-114 415.6 531 44.1
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 2.7e-106 390.2 332 61.4
Dinv23187 Davidia involucrata HOM05D005105 ORTHO05D006244 5.7e-96 355.9 246 72.8
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 9.7e-96 355.1 264 65.9
Actinidia18328 Actinidia chinensis HOM05D005105 ORTHO05D006244 2.2e-95 354.0 257 68.1
TWI34G0688 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 1.5e-88 331.3 215 74.0
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 9.4e-83 312.0 510 36.3
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.6e-74 284.6 218 62.4
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 1.8e-70 271.2 253 55.7
Gohir.D09G039750 Gossypium hirsutum HOM05D005105 ORTHO05D006244 6.3e-63 246.1 161 72.0
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 8.3e-63 245.7 243 55.1
CDE05G2066 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 8.6e-60 235.7 145 74.5
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 1.2e-53 215.3 170 59.4
Actinidia25549 Actinidia chinensis HOM05D005105 ORTHO05D006244 4.7e-50 203.4 132 71.2
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 2.2e-39 167.9 175 53.7
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 1.1e-38 165.6 183 56.3
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 3.5e-37 160.6 163 55.8
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.7e-36 158.3 174 51.7
Actinidia05877 Actinidia chinensis HOM05D000139 ORTHO05D000103 3.9e-36 157.1 205 45.9
CBR_g57654 Chara braunii HOM05D000004 ORTHO05D000002 1.6e-34 151.8 172 41.9
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 2.1e-34 151.4 135 54.8
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 5.8e-32 143.3 143 54.5
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 7.6e-32 142.9 93 74.2
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 1.9e-30 138.3 92 75.0
Actinidia25550 Actinidia chinensis HOM05D005105 ORTHO05D006244 7.8e-29 132.9 149 45.6
Glyma.19G097101 Glycine max HOM05D005105 ORTHO05D006244 1.1e-25 122.5 85 71.8
CSS0040735 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.1e-11 75.9 120 45.8
HPP92_009880 Vanilla planifolia HOM05D005105 ORTHO05D006244 5.6e-11 73.6 72 47.2
SEGI_15377 Sequoiadendron giganteum HOM05D005105 ORTHO05D006244 4.0e-09 67.4 72 45.8
CSS0042485 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 1.3e-07 62.4 114 38.6


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