Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 2.5e-111 405.6 228 100.0
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 1.9e-58 229.9 228 67.1
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 9.1e-53 211.1 225 56.0
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 4.5e-52 208.8 220 58.6
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 1.0e-51 207.6 229 62.9
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 6.8e-48 194.9 232 56.5
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 5.7e-47 191.8 229 58.1
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.7e-43 180.3 217 56.7
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 1.1e-42 177.6 231 56.3
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 1.9e-42 176.8 224 55.8
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 3.2e-42 176.0 214 59.8
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 7.2e-42 174.9 231 53.7
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 9.4e-42 174.5 208 52.9
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 2.1e-41 173.3 211 49.8
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 2.1e-41 173.3 211 49.8
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 8.0e-41 171.4 243 54.7
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 1.0e-40 171.0 224 54.9
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 1.8e-40 170.2 232 53.4
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.8e-40 170.2 213 53.5
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 3.0e-40 169.5 240 52.5
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 4.0e-40 169.1 190 56.8
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 4.0e-40 169.1 234 52.1
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 4.0e-40 169.1 231 52.4
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 6.8e-40 168.3 225 55.1
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 8.8e-40 167.9 224 56.7
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 2.0e-39 166.8 223 56.5
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 2.6e-39 166.4 227 52.9
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 3.4e-39 166.0 227 55.1
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 4.4e-39 165.6 230 55.2
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 5.7e-39 165.2 232 53.0
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 5.7e-39 165.2 213 48.4
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.7e-38 163.7 201 58.2
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 3.7e-38 162.5 208 57.7
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 3.7e-38 162.5 220 48.6
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 1.1e-37 161.0 238 44.1
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 2.4e-37 159.8 153 68.6
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 4.1e-37 159.1 227 54.2
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 5.9e-36 155.2 214 53.7
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 1.3e-35 154.1 233 51.1
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 3.8e-35 152.5 251 47.4
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 5.0e-35 152.1 154 65.6
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 8.6e-35 151.4 234 52.6
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 5.5e-34 148.7 215 49.8
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 9.5e-34 147.9 215 47.0
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 2.1e-33 146.7 230 51.3
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 2.1e-33 146.7 233 52.8
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 8.0e-33 144.8 220 49.5
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 1.8e-32 143.7 226 46.5
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 2.3e-32 143.3 192 47.9
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 3.0e-32 142.9 252 41.3
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 3.0e-32 142.9 225 50.2
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 6.8e-32 141.7 226 46.9
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 8.9e-32 141.4 173 54.3
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 1.5e-31 140.6 162 56.8
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 2.6e-31 139.8 174 49.4
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 2.6e-31 139.8 223 46.2
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 3.4e-31 139.4 229 46.3
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 3.4e-31 139.4 227 46.3
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 5.7e-31 138.7 240 49.6
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 5.7e-31 138.7 201 43.8
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 9.8e-31 137.9 223 45.3
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 9.8e-31 137.9 223 44.8
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 1.3e-30 137.5 224 46.4
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 1.3e-30 137.5 214 44.4
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 1.3e-30 137.5 240 49.6
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 1.3e-30 137.5 187 50.3
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 2.9e-30 136.3 223 42.6
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 6.3e-30 135.2 198 49.0
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 8.3e-30 134.8 165 49.1
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 1.1e-29 134.4 212 48.1
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 2.4e-29 133.3 193 47.7
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 4.1e-29 132.5 231 45.9
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 4.1e-29 132.5 190 50.0
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 5.4e-29 132.1 173 45.7
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 7.0e-29 131.7 229 44.1
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 7.0e-29 131.7 197 47.2
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 7.0e-29 131.7 191 44.5
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 9.2e-29 131.3 229 45.4
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 9.2e-29 131.3 158 52.5
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 9.2e-29 131.3 232 43.1
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 2.7e-28 129.8 154 48.7
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 1.3e-27 127.5 193 46.6
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 1.3e-27 127.5 219 49.8
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 5.0e-27 125.6 197 50.8
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 6.6e-27 125.2 231 46.8
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 1.1e-26 124.4 238 44.1
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 1.5e-26 124.0 190 42.1
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 2.5e-26 123.2 212 43.4
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 2.5e-26 123.2 181 43.1
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 4.3e-26 122.5 142 64.8
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 5.6e-26 122.1 116 69.8
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 2.1e-25 120.2 197 43.1
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 2.1e-25 120.2 259 43.2
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 2.8e-25 119.8 128 62.5
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 6.1e-25 118.6 223 42.2
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 4.0e-24 115.9 184 49.5
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 5.2e-24 115.5 145 48.3
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 8.9e-24 114.8 213 41.8
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 9.8e-23 111.3 199 39.2
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 3.7e-22 109.4 86 61.6
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 3.2e-21 106.3 97 78.4
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 2.0e-20 103.6 136 56.6
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 4.6e-20 102.4 157 47.1
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 6.0e-20 102.1 122 63.9
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 3.0e-19 99.8 124 50.8
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 3.9e-19 99.4 126 50.8
Haze_16651 Corylus avellana HOM05D005915 ORTHO05D007239 6.6e-19 98.6 81 72.8
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 1.1e-18 97.8 228 37.3
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 1.1e-18 97.8 278 32.4
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 3.6e-17 92.8 150 50.7
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 2.0e-15 87.0 82 53.7
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 8.3e-14 81.6 89 49.4
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 3.2e-13 79.7 177 35.6
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 8.6e-11 71.6 104 38.5
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 4.3e-10 69.3 98 43.9
Actinidia18238 Actinidia chinensis HOM05D005915 ORTHO05D007239 1.2e-09 67.8 59 66.1
ClCG00G004860 Citrullus lanatus HOM05D005915 ORTHO05D007239 1.2e-09 67.8 84 46.4
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 2.8e-09 66.6 33 93.9
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 1.4e-08 64.3 103 42.7
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 1.2e-07 61.2 90 41.1
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 2.0e-07 60.5 52 59.6
TAR625G0573 Trochodendron aralioides HOM05D005915 ORTHO05D007239 2.6e-07 60.1 73 50.7
CBR_g23038 Chara braunii HOM05D005915 ORTHO05D007239 4.4e-07 59.3 67 41.8
QL05p035114 Quercus lobata HOM05D005915 ORTHO05D007239 7.6e-07 58.5 37 86.5


User provided reference genes

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