Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p069325 Quercus lobata HOM05D006396 ORTHO05D008172 1.7e-151 539.3 273 100.0
Cfa007142 Carpinus fangiana HOM05D006396 ORTHO05D008172 1.4e-116 423.3 276 83.0
Haze_14981 Corylus avellana HOM05D006396 ORTHO05D008172 3.2e-113 412.1 276 81.5
CiPaw.04G001100 Carya illinoinensis HOM05D006396 ORTHO05D008172 4.2e-113 411.8 275 80.4
Manes.11G076200 Manihot esculenta HOM05D006396 ORTHO05D008172 2.1e-112 409.5 276 79.0
GSVIVG01032980001 Vitis vinifera HOM05D006396 ORTHO05D008172 2.6e-110 402.5 274 79.2
Thecc.04G048300 Theobroma cacao HOM05D006396 ORTHO05D008172 2.2e-109 399.4 279 78.5
COL.COLO4_13379 Corchorus olitorius HOM05D006396 ORTHO05D008172 2.0e-107 392.9 277 76.5
Dinv33276 Davidia involucrata HOM05D006396 ORTHO05D008172 5.9e-107 391.3 272 77.2
Gohir.D11G068100 Gossypium hirsutum HOM05D006396 ORTHO05D008172 5.9e-107 391.3 275 75.6
Gorai.007G072900 Gossypium raimondii HOM05D006396 ORTHO05D008172 5.9e-107 391.3 275 75.6
Cpa.g.sc70.60 Carica papaya HOM05D006396 ORTHO05D008172 1.7e-106 389.8 244 82.0
Gohir.A11G063800 Gossypium hirsutum HOM05D006396 ORTHO05D008172 3.8e-106 388.7 275 75.6
Sabra16G0313400 Salix brachista HOM05D006396 ORTHO05D008172 2.5e-105 386.0 281 76.2
Sabra16G0314900 Salix brachista HOM05D006396 ORTHO05D008172 3.2e-105 385.6 281 76.5
Potri.001G463200 Populus trichocarpa HOM05D006396 ORTHO05D008172 1.1e-102 377.1 287 73.5
TWI39G0493 Tripterygium wilfordii HOM05D006396 ORTHO05D008172 2.6e-102 375.9 274 75.9
TAR622G0848 Trochodendron aralioides HOM05D006396 ORTHO05D008172 2.6e-102 375.9 275 76.4
Phvul.004G069700 Phaseolus vulgaris HOM05D006396 ORTHO05D008172 3.3e-102 375.6 269 74.0
Ciclev10016116m.g Citrus clementina HOM05D006396 ORTHO05D008172 5.7e-102 374.8 285 71.9
Atru.chr6.2699 Acer truncatum HOM05D006396 ORTHO05D008172 3.7e-101 372.1 279 75.3
Lalb_Chr14g0364101 Lupinus albus HOM05D006396 ORTHO05D008172 1.4e-100 370.2 273 75.1
VMungo0464G1242 Vigna mungo HOM05D006396 ORTHO05D008172 1.8e-100 369.8 269 72.9
Lj1g0009632 Lotus japonicus HOM05D006396 ORTHO05D008172 5.3e-100 368.2 279 74.2
vmacro18382 Vaccinium macrocarpon HOM05D006396 ORTHO05D008172 7.0e-100 367.9 284 71.5
Oeu041974.1 Olea europaea HOM05D006396 ORTHO05D008172 1.6e-99 366.7 242 79.3
Rhsim08G0038900 Rhododendron simsii HOM05D006396 ORTHO05D008172 2.6e-99 365.9 286 73.1
Ca_08202_v3 Cicer arietinum L. HOM05D006396 ORTHO05D008172 2.2e-98 362.8 273 74.0
Glyma.16G147700 Glycine max HOM05D006396 ORTHO05D008172 2.2e-98 362.8 273 72.2
PGR142G1470 Punica granatum HOM05D006396 ORTHO05D008172 6.5e-98 361.3 274 70.4
Nn4g22123 Nelumbo nucifera HOM05D006396 ORTHO05D008172 1.1e-97 360.5 275 72.7
Eucgr.I01598 Eucalyptus grandis HOM05D006396 ORTHO05D008172 9.4e-97 357.5 279 73.8
MSTRG.15316 Avicennia marina HOM05D006396 ORTHO05D008172 2.7e-96 355.9 277 70.4
FAN05G4097 Fragaria x ananassa HOM05D006396 ORTHO05D008172 4.7e-96 355.1 275 70.9
FAN14G4577 Fragaria x ananassa HOM05D006396 ORTHO05D008172 2.3e-95 352.8 275 70.5
FAN09G2227 Fragaria x ananassa HOM05D006396 ORTHO05D008172 6.7e-95 351.3 275 70.2
RcHm_v2.0_Chr2g0176531 Rosa chinensis HOM05D006396 ORTHO05D008172 6.7e-95 351.3 275 72.0
Actinidia37717 Actinidia chinensis HOM05D006396 ORTHO05D008172 1.2e-94 350.5 282 72.3
Medtr7g084160 Medicago truncatula HOM05D006396 ORTHO05D008172 1.5e-94 350.1 276 70.3
Hund12907 Selenicereus undatus HOM05D006396 ORTHO05D008172 4.4e-94 348.6 274 69.0
arahy.Tifrunner.gnm1.ann1.Q1FZEB Arachis hypogaea HOM05D006396 ORTHO05D008172 1.3e-93 347.1 269 71.7
SalBow1G8636 Salvia bowleyana HOM05D006396 ORTHO05D008172 1.3e-93 347.1 273 70.3
arahy.Tifrunner.gnm1.ann1.P0PZ58 Arachis hypogaea HOM05D006396 ORTHO05D008172 2.8e-93 345.9 270 71.9
Psat0s4148g0040 Pisum sativum HOM05D006396 ORTHO05D008172 3.7e-93 345.5 272 72.1
SGA_v2.0_scaffold174G39282 Striga asiatica HOM05D006396 ORTHO05D008172 3.7e-93 345.5 215 83.3
TPR.G15411 Trifolium pratense HOM05D006396 ORTHO05D008172 4.8e-93 345.1 273 71.4
CANSAT21G0889 Cannabis sativa HOM05D006396 ORTHO05D008172 1.4e-92 343.6 275 69.1
Ah.03g136630 Amaranthus hybridus HOM05D006396 ORTHO05D008172 5.3e-92 341.7 275 67.3
AUR62037820 Chenopodium quinoa HOM05D006396 ORTHO05D008172 1.2e-91 340.5 277 66.8
MD09G1002500 Malus domestica HOM05D006396 ORTHO05D008172 1.6e-91 340.1 291 70.1
Nitab4.5_0000139g0180 Nicotiana tabacum HOM05D006396 ORTHO05D008172 2.7e-91 339.3 279 69.5
Lj7A617G76 Lonicera japonica HOM05D006396 ORTHO05D008172 3.5e-91 339.0 187 90.9
CSS0007606 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.3e-90 337.0 246 75.6
Prupe.3G313700 Prunus persica HOM05D006396 ORTHO05D008172 3.8e-90 335.5 298 66.8
AUR62017434 Chenopodium quinoa HOM05D006396 ORTHO05D008172 5.0e-90 335.1 274 66.8
Nitab4.5_0005452g0030 Nicotiana tabacum HOM05D006396 ORTHO05D008172 6.5e-90 334.7 279 68.8
MD17G1006700 Malus domestica HOM05D006396 ORTHO05D008172 2.5e-89 332.8 185 91.9
Sed0011277 Sechium edule HOM05D006396 ORTHO05D008172 2.5e-89 332.8 279 68.5
Solyc02g005210.3 Solanum lycopersicum HOM05D006396 ORTHO05D008172 3.2e-89 332.4 237 75.5
DCAR_014466 Daucus carota HOM05D006396 ORTHO05D008172 4.2e-89 332.0 265 69.8
THA.LOC104825656 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 4.2e-89 332.0 213 77.9
BolC7t44094H Brassica oleracea HOM05D006396 ORTHO05D008172 1.2e-88 330.5 219 79.9
CAN.G1108.4 Capsicum annuum HOM05D006396 ORTHO05D008172 1.2e-88 330.5 276 68.1
ClCG01G007850 Citrullus lanatus HOM05D006396 ORTHO05D008172 1.6e-88 330.1 277 66.1
Sopen02g001100 Solanum pennellii HOM05D006396 ORTHO05D008172 2.1e-88 329.7 277 68.6
BcaNung07107 Brassica carinata HOM05D006396 ORTHO05D008172 4.7e-88 328.6 219 79.5
C07p35740 Brassica napus HOM05D006396 ORTHO05D008172 4.7e-88 328.6 219 79.5
Hma1.2p1_1389F.1_g279970 Hydrangea macrophylla HOM05D006396 ORTHO05D008172 4.7e-88 328.6 185 90.3
Glyma.02G066600 Glycine max HOM05D006396 ORTHO05D008172 8.0e-88 327.8 227 76.7
A06p41790 Brassica napus HOM05D006396 ORTHO05D008172 1.4e-87 327.0 219 79.0
Sp2g15830 Schrenkiella parvula HOM05D006396 ORTHO05D008172 1.4e-87 327.0 216 80.1
PGSC0003DMG400014532 Solanum tuberosum HOM05D006396 ORTHO05D008172 1.4e-87 327.0 278 69.1
Aqoxy5G03069 Aquilegia oxysepala HOM05D006396 ORTHO05D008172 3.0e-87 325.9 280 66.4
Thhalv10004768m.g Eutrema salsugineum HOM05D006396 ORTHO05D008172 3.0e-87 325.9 219 79.0
Aa31LG2G5850 Aethionema arabicum HOM05D006396 ORTHO05D008172 4.0e-87 325.5 276 66.7
C02p53250 Brassica napus HOM05D006396 ORTHO05D008172 6.8e-87 324.7 217 78.8
CARHR147730 Cardamine hirsuta HOM05D006396 ORTHO05D008172 6.8e-87 324.7 240 72.5
BcaC06g31047 Brassica carinata HOM05D006396 ORTHO05D008172 1.2e-86 323.9 222 77.5
CsaV3_5G024930 Cucumis sativus L. HOM05D006396 ORTHO05D008172 1.2e-86 323.9 275 66.2
THA.LOC104805299 Tarenaya hassleriana HOM05D006396 ORTHO05D008172 1.2e-86 323.9 275 64.7
unitig_32.g11883 Utricularia gibba HOM05D006396 ORTHO05D008172 1.2e-86 323.9 234 73.1
ATR0582G370 Amborella trichopoda HOM05D006396 ORTHO05D008172 2.0e-86 323.2 194 84.0
Cc07_g01330 Coffea canephora HOM05D006396 ORTHO05D008172 3.4e-86 322.4 269 67.7
HanXRQChr17g0550901 Helianthus annuus HOM05D006396 ORTHO05D008172 3.4e-86 322.4 199 84.9
BolC2t11397H Brassica oleracea HOM05D006396 ORTHO05D008172 5.7e-86 321.6 217 77.9
Sc03g0005260 Simmondsia chinensis HOM05D006396 ORTHO05D008172 1.3e-85 320.5 277 64.3
AL5G15550 Arabidopsis lyrata HOM05D006396 ORTHO05D008172 2.8e-85 319.3 243 70.8
Carub.0005s0471 Capsella rubella HOM05D006396 ORTHO05D008172 4.8e-85 318.5 243 69.5
ECA246G0184 Erigeron canadensis HOM05D006396 ORTHO05D008172 1.1e-84 317.4 188 88.3
PSO478G0237 Papaver somniferum HOM05D006396 ORTHO05D008172 1.1e-84 317.4 280 63.6
Lsat_1_v5_gn_3_104821 Lactuca sativa HOM05D006396 ORTHO05D008172 4.1e-84 315.5 266 68.8
AT3G26710 Arabidopsis thaliana HOM05D006396 ORTHO05D008172 5.4e-84 315.1 243 69.5
PSO017G3463 Papaver somniferum HOM05D006396 ORTHO05D008172 2.0e-83 313.2 280 63.9
BraA02t08477Z Brassica rapa HOM05D006396 ORTHO05D008172 4.2e-81 305.4 240 70.0
CDE05G2379 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 1.6e-80 303.5 243 66.7
HPP92_009800 Vanilla planifolia HOM05D006396 ORTHO05D008172 8.0e-80 301.2 248 66.5
EL10Ac6g13409 Beta vulgaris HOM05D006396 ORTHO05D008172 2.3e-79 299.7 276 62.3
CSS0000498 Camellia sinensis var. sinensis HOM05D006396 ORTHO05D008172 1.2e-78 297.4 237 71.3
Migut.L00475 Erythranthe guttata HOM05D006396 ORTHO05D008172 9.8e-78 294.3 273 61.9
Os11g0526200 Oryza sativa ssp. japonica HOM05D006396 ORTHO05D008172 1.4e-76 290.4 190 75.3
Zm00001eb198120 Zea mays HOM05D006396 ORTHO05D008172 2.4e-76 289.7 184 77.7
BcaC03g17380 Brassica carinata HOM05D006396 ORTHO05D008172 7.5e-70 268.1 197 72.6
Mapoly0054s0013 Marchantia polymorpha HOM05D006396 ORTHO05D008172 9.8e-70 267.7 194 67.0
Duzib147G0670 Durio zibethinus HOM05D006396 ORTHO05D008172 2.7e-67 259.6 276 58.0
SMO146G0400 Selaginella moellendorffii HOM05D006396 ORTHO05D008172 6.6e-66 255.0 187 66.8
FvH4_6g54310 Fragaria vesca HOM05D006396 ORTHO05D008172 4.7e-64 248.8 214 66.4
CBR_g29738 Chara braunii HOM05D006396 ORTHO05D008172 1.7e-61 240.4 211 59.7
Pp3c2_10260 Physcomitrium patens HOM05D006396 ORTHO05D008172 1.1e-60 237.7 202 58.9
MELO3C005101.2 Cucumis melo HOM05D006396 ORTHO05D008172 2.8e-56 223.0 146 78.8
CDE05G2841 Ceratophyllum demersum HOM05D006396 ORTHO05D008172 3.4e-54 216.1 208 60.6
SGA_v2.0_scaffold174G39277 Striga asiatica HOM05D006396 ORTHO05D008172 9.6e-49 198.0 206 56.8
PRCOL_00002489 Prasinoderma coloniale HOM05D006396 ORTHO05D008172 4.7e-48 195.7 221 46.2
Peaxi162Scf00818g00123 Petunia axillaris HOM05D006396 ORTHO05D008172 4.0e-47 192.6 109 85.3
MCO04G060 Micromonas commoda HOM05D006396 ORTHO05D008172 6.4e-45 185.3 198 49.5
AagrBONN_evm.TU.Sc2ySwM_368.425 Anthoceros agrestis HOM05D006396 ORTHO05D008172 7.1e-44 181.8 134 69.4
SEGI_35956 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 1.9e-41 173.7 109 73.4
Cre16.g662150 Chlamydomonas reinhardtii HOM05D006396 ORTHO05D008172 3.8e-37 159.5 183 47.0
FAN02G1480 Fragaria x ananassa HOM05D006396 ORTHO05D008172 5.1e-34 149.1 141 63.1
SEGI_37491 Sequoiadendron giganteum HOM05D006396 ORTHO05D008172 2.8e-24 116.7 82 70.7
BolC2t09342H Brassica oleracea HOM05D006396 ORTHO05D000401 3.7e-16 89.7 74 64.9
MD04G1090800 Malus domestica HOM05D006396 ORTHO05D008172 1.8e-15 87.4 50 82.0
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 1.9e-12 77.4 106 50.0
Psat7g159680 Pisum sativum HOM05D006396 ORTHO05D008172 2.3e-10 70.5 44 75.0
A02p34690 Brassica napus HOM05D006396 ORTHO05D008172 1.1e-09 68.2 44 77.3
C01p21980 Brassica napus HOM05D004448 ORTHO05D015948 2.0e-06 57.4 78 48.7


User provided reference genes

Program Settings