Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p069049 Quercus lobata HOM05D004185 ORTHO05D337452 1.0e-82 310.1 158 100.0
QL02p068903 Quercus lobata HOM05D004185 ORTHO05D005294 1.5e-17 93.6 68 77.9
QL02p069093 Quercus lobata HOM05D004185 ORTHO05D005294 9.5e-09 64.3 33 100.0
QL02p069129 Quercus lobata HOM05D004185 ORTHO05D005294 9.5e-09 64.3 33 100.0
Cfa007152 Carpinus fangiana HOM05D004185 ORTHO05D005294 1.1e-07 60.8 33 97.0
CiPaw.07G054200 Carya illinoinensis HOM05D004185 ORTHO05D005294 1.1e-07 60.8 33 97.0
Haze_14968 Corylus avellana HOM05D004185 ORTHO05D005294 1.1e-07 60.8 33 97.0
QL02p069147 Quercus lobata HOM05D004185 ORTHO05D005294 2.3e-07 59.7 33 93.9
Lj1g0009190 Lotus japonicus HOM05D004185 ORTHO05D005294 4.0e-07 58.9 33 87.9
Lj2g0021694 Lotus japonicus HOM05D004185 ORTHO05D005294 4.0e-07 58.9 33 87.9
Lalb_Chr02g0153581 Lupinus albus HOM05D004185 ORTHO05D005294 4.0e-07 58.9 33 87.9
QL08p064476 Quercus lobata HOM05D004185 ORTHO05D005294 4.0e-07 58.9 33 90.9
Phvul.001G082700 Phaseolus vulgaris HOM05D004185 ORTHO05D005294 6.8e-07 58.2 33 90.9
Psat3g092000 Pisum sativum HOM05D004185 ORTHO05D005294 8.9e-07 57.8 33 87.9
TPR.G26467 Trifolium pratense HOM05D004185 ORTHO05D005294 8.9e-07 57.8 33 87.9
arahy.Tifrunner.gnm1.ann1.DC6XCB Arachis hypogaea HOM05D004185 ORTHO05D005294 1.5e-06 57.0 33 87.9
arahy.Tifrunner.gnm1.ann1.J4TN1Z Arachis hypogaea HOM05D004185 ORTHO05D005294 1.5e-06 57.0 33 87.9
VMungo0464G1671 Vigna mungo HOM05D004185 ORTHO05D005294 1.5e-06 57.0 33 87.9
Ca_08226_v3 Cicer arietinum L. HOM05D004185 ORTHO05D005294 2.0e-06 56.6 37 78.4
Haze_15442 Corylus avellana HOM05D004185 ORTHO05D005294 2.0e-06 56.6 33 90.9
Sed0024479 Sechium edule HOM05D004185 ORTHO05D005294 2.0e-06 56.6 33 84.8
Medtr7g084480 Medicago truncatula HOM05D004185 ORTHO05D005294 2.6e-06 56.2 33 84.8
CANSAT80G1231 Cannabis sativa HOM05D004185 ORTHO05D005294 3.4e-06 55.8 33 84.8
Glyma.16G046900 Glycine max HOM05D004185 ORTHO05D005294 4.4e-06 55.5 33 87.9
Cpa.g.sc139.45 Carica papaya HOM05D004185 ORTHO05D005294 7.6e-06 54.7 33 81.8
CDE01G0632 Ceratophyllum demersum HOM05D004185 ORTHO05D005294 7.6e-06 54.7 33 81.8
Cc02_g08450 Coffea canephora HOM05D004185 ORTHO05D005294 7.6e-06 54.7 43 69.8
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 7.6e-06 54.7 33 81.8
Aa31LG2G14180 Aethionema arabicum HOM05D004185 ORTHO05D005294 9.9e-06 54.3 33 78.8
Aqoxy6G01376 Aquilegia oxysepala HOM05D004185 ORTHO05D005294 9.9e-06 54.3 32 81.2
A05p25460 Brassica napus HOM05D004185 ORTHO05D005294 9.9e-06 54.3 33 78.8
A09p34390 Brassica napus HOM05D004185 ORTHO05D005294 9.9e-06 54.3 33 75.8
BraA05t21430Z Brassica rapa HOM05D004185 ORTHO05D005294 9.9e-06 54.3 33 78.8
BraA09t38984Z Brassica rapa HOM05D004185 ORTHO05D005294 9.9e-06 54.3 33 75.8
CARHR031200 Cardamine hirsuta HOM05D004185 ORTHO05D005294 9.9e-06 54.3 33 75.8
Thhalv10008417m.g Eutrema salsugineum HOM05D004185 ORTHO05D005294 9.9e-06 54.3 33 75.8
Rhsim08G0038300 Rhododendron simsii HOM05D004185 ORTHO05D005294 9.9e-06 54.3 42 71.4
TWI63G0858 Tripterygium wilfordii HOM05D004185 ORTHO05D005294 9.9e-06 54.3 44 68.2


User provided reference genes

Program Settings