Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p068098 Quercus lobata HOM05D000003 ORTHO05D000167 2.1e-102 375.6 173 100.0
QL10p036891 Quercus lobata HOM05D000003 ORTHO05D000004 1.4e-24 117.1 288 29.2
QL12p036057 Quercus lobata HOM05D001694 ORTHO05D000248 2.3e-24 116.3 280 30.4
QL07p012155 Quercus lobata HOM05D000003 ORTHO05D000167 2.6e-20 102.8 90 54.4
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 5.7e-15 85.1 323 23.2
QL04p013142 Quercus lobata HOM05D000003 ORTHO05D000167 7.5e-15 84.7 159 34.0
QL12p023981 Quercus lobata HOM05D000003 ORTHO05D000004 7.5e-15 84.7 176 26.7
QL02p055170 Quercus lobata HOM05D000003 ORTHO05D000004 6.3e-14 81.6 59 50.8
QL02p054803 Quercus lobata HOM05D000003 ORTHO05D000004 8.3e-14 81.3 222 25.7
QL04p092150 Quercus lobata HOM05D004270 ORTHO05D005037 1.4e-13 80.5 174 25.3
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 3.1e-13 79.3 183 31.1
FvH4_4g12942 Fragaria vesca HOM05D001338 ORTHO05D001239 4.1e-13 79.0 198 27.8
QL12p032525 Quercus lobata HOM05D000003 ORTHO05D000167 5.4e-13 78.6 209 27.8
QL06p025841 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-12 77.4 104 37.5
QL12p015842 Quercus lobata HOM05D000003 ORTHO05D000004 7.7e-12 74.7 233 24.0
QL04p012310 Quercus lobata HOM05D000009 ORTHO05D000008 8.5e-11 71.2 58 53.4
QL04p082656 Quercus lobata HOM05D000003 ORTHO05D000167 2.5e-10 69.7 218 23.9
QL03p052584 Quercus lobata HOM05D000003 ORTHO05D000004 4.2e-10 68.9 195 24.6
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 7.2e-10 68.2 92 40.2
Atru.chr13.1607 Acer truncatum HOM05D000003 ORTHO05D000167 1.2e-09 67.4 93 41.9
QL11p013009 Quercus lobata HOM05D000003 ORTHO05D000167 1.6e-09 67.0 89 38.2
QL04p058624 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-09 66.6 91 36.3
QL01p044414 Quercus lobata HOM05D000414 ORTHO05D000276 2.7e-09 66.2 182 27.5
QL02p051981 Quercus lobata HOM05D000003 ORTHO05D000167 2.7e-09 66.2 90 37.8
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 6.1e-09 65.1 92 37.0
Atru.chr11.1055 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-08 63.9 212 29.7
PSO063G4669 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-08 63.9 183 25.7
QL01p037957 Quercus lobata HOM05D000003 ORTHO05D029996 1.4e-08 63.9 92 35.9
Atru.chr4.2367 Acer truncatum HOM05D000003 ORTHO05D000167 1.8e-08 63.5 239 26.4
QL05p054879 Quercus lobata HOM05D000003 ORTHO05D000126 1.8e-08 63.5 186 28.0
AUR62040533 Chenopodium quinoa HOM05D000102 ORTHO05D000006 2.3e-08 63.2 192 29.2
QL06p046108 Quercus lobata HOM05D028670 ORTHO05D000167 4.0e-08 62.4 92 35.9
CiPaw.13G119100 Carya illinoinensis HOM05D000003 ORTHO05D000004 5.2e-08 62.0 70 42.9
QL07p039728 Quercus lobata HOM05D000003 ORTHO05D000004 5.2e-08 62.0 91 33.0
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 6.8e-08 61.6 318 21.1
QL02p039492 Quercus lobata HOM05D000003 ORTHO05D000167 8.8e-08 61.2 91 33.0
QL05p018687 Quercus lobata HOM05D000106 ORTHO05D000160 8.8e-08 61.2 92 33.7
Atru.chr12.2026 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-07 60.5 220 25.5
CiPaw.15G166300 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.5e-07 60.5 227 23.8
QL05p042000 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-07 60.5 83 33.7
QL12p015597 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-07 60.5 91 34.1
QL02p009216 Quercus lobata HOM05D000003 ORTHO05D000167 2.0e-07 60.1 92 33.7
QL09p039085 Quercus lobata HOM05D000003 ORTHO05D000004 3.4e-07 59.3 56 41.1
QL05p041732 Quercus lobata HOM05D000003 ORTHO05D000004 4.4e-07 58.9 160 25.6
QL07p025038 Quercus lobata HOM05D000003 ORTHO05D000167 4.4e-07 58.9 91 31.9
Atru.chr2.2758 Acer truncatum HOM05D000003 ORTHO05D000167 7.5e-07 58.2 193 25.9
QL05p051227 Quercus lobata HOM05D000003 ORTHO05D000004 9.8e-07 57.8 285 20.0
QL07p038909 Quercus lobata HOM05D000003 ORTHO05D000004 9.8e-07 57.8 58 41.4
Atru.chr9.1010 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-06 57.4 41 61.0
CANSAT64G1929 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-06 57.4 203 24.1
FvH4_3g32552 Fragaria vesca HOM05D000003 ORTHO05D006737 1.3e-06 57.4 59 42.4
Atru.chr10.418 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-06 57.0 186 28.5
Atru.chr4.1218 Acer truncatum HOM05D000003 ORTHO05D000167 1.7e-06 57.0 93 36.6
Atru.chr5.2963 Acer truncatum HOM05D000003 ORTHO05D000006 1.7e-06 57.0 173 25.4
FvH4_3g28461 Fragaria vesca HOM05D000003 ORTHO05D014631 1.7e-06 57.0 201 24.9
FvH4_6g36441 Fragaria vesca HOM05D000003 ORTHO05D019158 1.7e-06 57.0 75 34.7
QL03p035115 Quercus lobata HOM05D000254 ORTHO05D000165 1.7e-06 57.0 94 33.0
Atru.chr10.114 Acer truncatum HOM05D000003 ORTHO05D000167 2.2e-06 56.6 93 36.6
Atru.chr10.97 Acer truncatum HOM05D000003 ORTHO05D000167 2.2e-06 56.6 93 36.6
Atru.chr11.1423 Acer truncatum HOM05D000003 ORTHO05D000167 2.2e-06 56.6 227 25.6
Aa31LG2G12260 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-06 56.6 58 41.4
CANSAT11G2368 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-06 56.6 99 35.4
CANSAT25G2195 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-06 56.6 189 23.3
CANSAT64G0247 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-06 56.6 169 24.3
CANSAT80G0405 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-06 56.6 195 25.1
QL03p051530 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-06 56.6 103 28.2
QL08p028913 Quercus lobata HOM05D000328 ORTHO05D000191 2.2e-06 56.6 85 30.6
RcHm_v2.0_Chr1g0344421 Rosa chinensis HOM05D000003 ORTHO05D006737 2.2e-06 56.6 92 32.6
QL03p039168 Quercus lobata HOM05D000003 ORTHO05D000167 2.8e-06 56.2 93 31.2
QL04p035197 Quercus lobata HOM05D000003 ORTHO05D036413 2.8e-06 56.2 94 35.1
Atru.chr5.1665 Acer truncatum HOM05D000003 ORTHO05D000167 3.7e-06 55.8 93 39.8
AUR62024077 Chenopodium quinoa HOM05D012275 ORTHO05D000004 3.7e-06 55.8 172 27.9
QL01p014938 Quercus lobata HOM05D000003 ORTHO05D000167 3.7e-06 55.8 184 28.8
QL03p038570 Quercus lobata HOM05D000003 ORTHO05D000167 3.7e-06 55.8 91 30.8
QL04p086248 Quercus lobata HOM05D000003 ORTHO05D000004 3.7e-06 55.8 229 23.6
QL05p042365 Quercus lobata HOM05D000003 ORTHO05D000167 3.7e-06 55.8 94 35.1
CANSAT56G3299 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-06 55.5 97 29.9
Lju897C2T1 Lonicera japonica HOM05D000003 ORTHO05D000126 4.9e-06 55.5 199 25.6
QL09p043312 Quercus lobata HOM05D000003 ORTHO05D000167 4.9e-06 55.5 92 30.4
QL09p054057 Quercus lobata HOM05D000003 ORTHO05D000004 4.9e-06 55.5 91 31.9
TWI18G1127 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 4.9e-06 55.5 219 25.6
EL10Ac5g12187 Beta vulgaris HOM05D000003 ORTHO05D000006 6.3e-06 55.1 90 30.0
AUR62028018 Chenopodium quinoa HOM05D000003 ORTHO05D000004 6.3e-06 55.1 59 44.1
QL09p019305 Quercus lobata HOM05D000003 ORTHO05D000004 6.3e-06 55.1 58 43.1
QL11p033599 Quercus lobata HOM05D000003 ORTHO05D000004 6.3e-06 55.1 59 39.0
Atru.chr11.694 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-06 54.7 218 24.8
Atru.chr2.2733 Acer truncatum HOM05D000003 ORTHO05D000167 8.3e-06 54.7 123 26.8
Atru.chr5.1667 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-06 54.7 163 27.6
CANSAT21G1499 Cannabis sativa HOM05D000003 ORTHO05D000167 8.3e-06 54.7 97 29.9
CANSAT56G1927 Cannabis sativa HOM05D000003 ORTHO05D000167 8.3e-06 54.7 97 29.9
QL01p049931 Quercus lobata HOM05D000003 ORTHO05D011877 8.3e-06 54.7 44 45.5


User provided reference genes

Program Settings