Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 4.0e-265 917.5 467 100.0
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 2.1e-35 154.5 89 82.0
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 4.3e-33 146.7 89 74.2
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 5.6e-33 146.4 90 76.7
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 9.6e-33 145.6 91 75.8
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 2.1e-32 144.4 90 76.7
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 2.1e-32 144.4 90 72.2
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 2.8e-32 144.1 93 71.0
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 2.8e-32 144.1 90 73.3
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 3.7e-32 143.7 93 69.9
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 3.7e-32 143.7 90 75.6
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 4.8e-32 143.3 90 74.4
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 6.2e-32 142.9 96 72.9
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 1.1e-31 142.1 90 76.7
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 3.1e-31 140.6 90 71.1
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 4.0e-31 140.2 90 75.6
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 6.9e-31 139.4 117 62.4
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 6.9e-31 139.4 129 55.0
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 1.2e-30 138.7 92 72.8
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 1.2e-30 138.7 90 75.6
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 1.5e-30 138.3 88 75.0
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 2.0e-30 137.9 90 72.2
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 2.6e-30 137.5 88 71.6
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 2.6e-30 137.5 90 68.9
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 2.6e-30 137.5 88 71.6
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 3.4e-30 137.1 90 70.0
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 3.4e-30 137.1 90 73.3
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 4.5e-30 136.7 130 55.4
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 5.8e-30 136.3 86 75.6
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 5.8e-30 136.3 86 75.6
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 5.8e-30 136.3 86 75.6
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 5.8e-30 136.3 90 70.0
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 1.0e-29 135.6 90 72.2
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.0e-29 135.6 134 52.2
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.0e-29 135.6 134 52.2
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 1.0e-29 135.6 90 68.9
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 1.0e-29 135.6 90 74.4
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 1.3e-29 135.2 90 73.3
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 1.3e-29 135.2 86 74.4
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 2.9e-29 134.0 87 74.7
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 2.9e-29 134.0 90 68.9
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 4.9e-29 133.3 90 70.0
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 4.9e-29 133.3 90 70.0
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 4.9e-29 133.3 90 70.0
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 4.9e-29 133.3 90 70.0
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 4.9e-29 133.3 90 70.0
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 4.9e-29 133.3 90 70.0
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 6.5e-29 132.9 90 70.0
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 8.4e-29 132.5 104 64.4
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 8.4e-29 132.5 90 72.2
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 8.4e-29 132.5 90 68.9
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 1.1e-28 132.1 90 70.0
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 1.1e-28 132.1 90 67.8
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.1e-28 132.1 87 74.7
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 1.1e-28 132.1 87 74.7
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 1.1e-28 132.1 90 68.9
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.9e-28 131.3 90 70.0
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 1.9e-28 131.3 87 71.3
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 3.2e-28 130.6 90 67.8
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 4.2e-28 130.2 90 70.0
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 4.2e-28 130.2 90 67.8
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 4.2e-28 130.2 90 71.1
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 4.2e-28 130.2 87 72.4
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 5.5e-28 129.8 92 65.2
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 5.5e-28 129.8 90 67.8
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 5.5e-28 129.8 90 67.8
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 5.5e-28 129.8 90 67.8
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 7.1e-28 129.4 90 67.8
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 7.1e-28 129.4 88 69.3
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 7.1e-28 129.4 90 67.8
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 9.3e-28 129.0 88 69.3
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 2.1e-27 127.9 90 70.0
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 2.7e-27 127.5 78 76.9
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 3.5e-27 127.1 85 70.6
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 4.6e-27 126.7 90 66.7
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 6.0e-27 126.3 90 66.7
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 7.9e-27 125.9 90 66.7
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 1.0e-26 125.6 90 68.9
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 1.3e-26 125.2 90 68.9
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 1.8e-26 124.8 102 59.8
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 2.3e-26 124.4 91 67.0
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 2.3e-26 124.4 82 70.7
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 3.0e-26 124.0 90 66.7
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 3.0e-26 124.0 90 66.7
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 5.1e-26 123.2 79 69.6
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 1.1e-25 122.1 90 64.4
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 3.3e-25 120.6 91 63.7
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 1.6e-24 118.2 87 65.5
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 4.8e-24 116.7 87 65.5
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 1.3e-21 108.6 85 57.6
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 1.7e-21 108.2 85 57.6
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 1.0e-18 99.0 71 64.8
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 5.1e-18 96.7 80 57.5
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 8.7e-18 95.9 69 65.2
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 1.1e-17 95.5 85 56.5
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 4.3e-17 93.6 81 50.6
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 5.7e-17 93.2 90 55.6
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 5.7e-17 93.2 90 55.6
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 4.8e-16 90.1 83 51.8
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 2.5e-09 67.8 49 61.2
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 1.3e-08 65.5 46 69.6


User provided reference genes

Program Settings