Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p066467 Quercus lobata HOM05D010262 ORTHO05D010379 1.2e-58 229.6 113 100.0
QL02p066431 Quercus lobata HOM05D010262 ORTHO05D010379 3.6e-58 228.0 112 100.0
CiPaw.03G087100 Carya illinoinensis HOM05D010262 ORTHO05D010379 2.3e-17 92.4 111 50.5
Cfa021135 Carpinus fangiana HOM05D010262 ORTHO05D010379 2.2e-15 85.9 110 50.0
Potri.017G095700 Populus trichocarpa HOM05D010262 ORTHO05D010379 8.3e-15 84.0 96 50.0
Potri.017G096300 Populus trichocarpa HOM05D010262 ORTHO05D010379 8.3e-15 84.0 96 50.0
Potri.017G098100 Populus trichocarpa HOM05D010262 ORTHO05D010379 1.4e-14 83.2 96 50.0
Potri.017G096500 Populus trichocarpa HOM05D010262 ORTHO05D010379 1.1e-11 73.6 94 46.8
Gorai.001G090600 Gossypium raimondii HOM05D013261 ORTHO05D010379 1.9e-11 72.8 100 45.0
Sabra17G0084700 Salix brachista HOM05D010262 ORTHO05D010379 4.3e-11 71.6 95 41.1
Gohir.D07G084800 Gossypium hirsutum HOM05D013261 ORTHO05D010379 5.6e-11 71.2 100 44.0
SabraUnG0001200 Salix brachista HOM05D010262 ORTHO05D010379 2.8e-10 68.9 95 42.1
SabraUnG0001500 Salix brachista HOM05D010262 ORTHO05D010379 2.8e-10 68.9 95 42.1
Potri.017G098300 Populus trichocarpa HOM05D010262 ORTHO05D010379 1.4e-09 66.6 57 54.4
Ciclev10013129m.g Citrus clementina HOM05D010262 ORTHO05D010379 5.2e-09 64.7 90 43.3
Thecc.04G102500 Theobroma cacao HOM05D013261 ORTHO05D010379 4.4e-08 61.6 101 38.6
CSS0000209 Camellia sinensis var. sinensis HOM05D005927 ORTHO05D006952 9.9e-08 60.5 114 35.1
SabraUnG0001100 Salix brachista HOM05D010262 ORTHO05D010379 9.9e-08 60.5 95 35.8
Gohir.D07G084950 Gossypium hirsutum HOM05D013261 ORTHO05D022803 1.7e-07 59.7 119 32.8
CSS0010844 Camellia sinensis var. sinensis HOM05D005927 ORTHO05D006952 2.2e-07 59.3 108 36.1
CSS0015614 Camellia sinensis var. sinensis HOM05D005927 ORTHO05D006952 2.9e-07 58.9 108 36.1
Duzib211G0483 Durio zibethinus HOM05D013261 ORTHO05D010379 2.9e-07 58.9 96 35.4
Manes.01G102300 Manihot esculenta HOM05D010262 ORTHO05D010379 3.7e-07 58.5 117 34.2
Prupe.1G167100 Prunus persica HOM05D005927 ORTHO05D006952 3.7e-07 58.5 105 38.1
Gohir.D07G084900 Gossypium hirsutum HOM05D013261 ORTHO05D022803 4.9e-07 58.2 119 32.8
Oeu007073.1 Olea europaea HOM05D016393 ORTHO05D018533 6.4e-07 57.8 90 40.0
arahy.Tifrunner.gnm1.ann1.6R0Q3T Arachis hypogaea HOM05D005927 ORTHO05D006952 8.3e-07 57.4 91 41.8
Manes.05G201886 Manihot esculenta HOM05D005927 ORTHO05D006952 8.3e-07 57.4 75 45.3
Haze_11664 Corylus avellana HOM05D005927 ORTHO05D006952 1.1e-06 57.0 105 35.2
Gorai.001G090700 Gossypium raimondii HOM05D013261 ORTHO05D022803 1.4e-06 56.6 119 32.8
Gorai.001G090800 Gossypium raimondii HOM05D013261 ORTHO05D022803 1.9e-06 56.2 118 30.5
COL.COLO4_04719 Corchorus olitorius HOM05D013261 ORTHO05D010379 2.4e-06 55.8 97 37.1
MSTRG.14172 Avicennia marina HOM05D016393 ORTHO05D018533 4.1e-06 55.1 98 39.8
Cfa008638 Carpinus fangiana HOM05D005927 ORTHO05D006952 4.1e-06 55.1 78 38.5
FAN12G2699 Fragaria x ananassa HOM05D005927 ORTHO05D006952 5.4e-06 54.7 104 35.6
CiPaw.01G115600 Carya illinoinensis HOM05D005927 ORTHO05D006952 7.1e-06 54.3 95 34.7
FvH4_4g13190 Fragaria vesca HOM05D005927 ORTHO05D006952 7.1e-06 54.3 104 35.6
Nn1g08157 Nelumbo nucifera HOM05D005927 ORTHO05D006952 7.1e-06 54.3 76 40.8
VMungo0251G3792 Vigna mungo HOM05D005927 ORTHO05D006952 9.2e-06 53.9 106 37.7


User provided reference genes

Program Settings