Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 1.9e-59 232.3 112 100.0
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 2.0e-45 185.7 106 81.1
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 1.4e-43 179.5 111 78.4
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 2.5e-43 178.7 110 79.1
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 4.2e-43 177.9 113 77.0
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 1.2e-42 176.4 113 75.2
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.3e-41 172.9 110 77.3
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 3.9e-41 171.4 113 77.0
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 5.1e-41 171.0 113 71.7
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 1.9e-40 169.1 108 76.9
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.5e-40 168.7 110 75.5
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.5e-40 168.7 110 75.5
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 5.7e-40 167.5 112 73.2
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 1.3e-39 166.4 112 73.2
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 1.3e-39 166.4 112 73.2
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 2.2e-39 165.6 108 72.2
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 4.8e-39 164.5 107 76.6
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 6.3e-39 164.1 113 69.9
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 1.4e-38 162.9 108 72.2
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.4e-38 162.9 108 72.2
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 1.8e-38 162.5 108 70.4
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 3.1e-38 161.8 113 69.0
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 2.6e-37 158.7 108 69.4
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 5.9e-37 157.5 108 69.4
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 7.7e-37 157.1 112 70.5
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 1.0e-36 156.8 108 69.4
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 2.9e-36 155.2 109 69.7
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 5.0e-36 154.5 113 62.8
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 3.2e-35 151.8 99 76.8
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 5.5e-35 151.0 106 68.9
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 5.5e-35 151.0 108 67.6
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 9.4e-35 150.2 110 68.2
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 1.2e-34 149.8 110 68.2
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 1.2e-34 149.8 107 68.2
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 2.1e-34 149.1 109 63.3
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 3.6e-34 148.3 108 66.7
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 4.7e-34 147.9 112 66.1
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 6.1e-34 147.5 108 65.7
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 7.9e-34 147.1 107 62.6
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 1.0e-33 146.7 108 64.8
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 3.0e-33 145.2 112 65.2
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 3.9e-33 144.8 108 67.6
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 5.1e-33 144.4 112 65.2
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 5.1e-33 144.4 107 70.1
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 5.1e-33 144.4 107 63.6
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 1.1e-32 143.3 108 64.8
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 4.4e-32 141.4 108 67.6
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 4.4e-32 141.4 108 67.6
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 4.4e-32 141.4 109 65.1
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 4.4e-32 141.4 112 62.5
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 7.4e-32 140.6 111 64.9
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 4.8e-31 137.9 108 62.0
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 1.8e-30 136.0 107 64.5
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 2.4e-30 135.6 108 60.2
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 4.1e-30 134.8 107 57.9
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 5.3e-30 134.4 110 60.9
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 5.3e-30 134.4 98 71.4
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 9.1e-30 133.7 108 60.2
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 9.1e-30 133.7 109 63.3
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 1.2e-29 133.3 108 60.2
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 1.5e-29 132.9 87 73.6
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 2.0e-29 132.5 108 61.1
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 2.6e-29 132.1 108 54.6
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 4.5e-29 131.3 109 62.4
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 7.7e-29 130.6 113 57.5
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 7.7e-29 130.6 112 55.4
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 1.7e-28 129.4 108 60.2
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 2.2e-28 129.0 113 60.2
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 2.2e-28 129.0 108 58.3
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 1.1e-27 126.7 109 59.6
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 1.1e-27 126.7 113 54.9
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 4.2e-27 124.8 107 58.9
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 1.2e-26 123.2 102 60.8
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 2.1e-26 122.5 109 56.0
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 2.1e-26 122.5 123 52.8
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 3.6e-26 121.7 112 57.1
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 3.6e-26 121.7 109 58.7
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 1.4e-25 119.8 108 54.6
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 3.9e-25 118.2 66 84.8
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 2.6e-24 115.5 108 51.9
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 2.6e-24 115.5 107 51.4
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 3.3e-24 115.2 109 55.0
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 7.4e-24 114.0 108 51.9
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 7.4e-24 114.0 108 51.9
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 1.3e-23 113.2 96 58.3
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 2.8e-23 112.1 69 73.9
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 1.8e-22 109.4 108 50.0
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 5.3e-22 107.8 108 49.1
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 5.3e-22 107.8 108 49.1
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 7.0e-22 107.5 108 49.1
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 7.0e-22 107.5 108 49.1
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 9.1e-22 107.1 105 52.4
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.2e-21 106.7 107 51.4
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 2.0e-21 105.9 110 53.6
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 4.5e-21 104.8 109 47.7
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 5.0e-20 101.3 108 47.2
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 1.2e-18 96.7 108 48.1
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.6e-18 96.3 60 75.0
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 2.1e-18 95.9 68 66.2
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 1.0e-17 93.6 106 45.3
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 5.7e-16 87.8 110 42.7
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 2.2e-15 85.9 106 42.5
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 3.1e-14 82.0 105 43.8
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 3.6e-10 68.6 37 89.2
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 1.4e-06 56.6 55 45.5
Rhsim10G0056400 Rhododendron simsii HOM05D007430 ORTHO05D009322 2.4e-06 55.8 39 69.2


User provided reference genes

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