Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 6.1e-92 340.9 184 100.0
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 4.3e-61 238.4 167 79.6
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 9.6e-61 237.3 162 77.8
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.2e-58 230.3 167 76.6
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 3.4e-58 228.8 167 76.0
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 5.8e-58 228.0 167 75.4
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.3e-57 226.9 162 74.1
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.7e-57 226.5 167 74.3
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.2e-57 226.1 162 74.1
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.9e-57 225.7 162 74.1
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 6.4e-57 224.6 167 70.7
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 6.4e-57 224.6 160 74.4
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 1.4e-56 223.4 167 70.1
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.9e-56 223.0 167 69.5
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.9e-56 223.0 167 70.1
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.9e-56 223.0 157 73.2
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 2.4e-56 222.6 167 69.5
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 2.4e-56 222.6 167 72.5
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 4.2e-56 221.9 157 75.8
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.2e-56 221.9 159 74.2
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 4.2e-56 221.9 141 80.9
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 5.4e-56 221.5 170 70.6
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 7.1e-56 221.1 157 74.5
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 9.3e-56 220.7 167 69.5
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.2e-55 220.3 168 72.0
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.2e-55 220.3 161 77.0
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 1.6e-55 219.9 161 73.9
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.7e-55 219.2 169 68.6
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 2.7e-55 219.2 167 72.5
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 2.7e-55 219.2 167 68.3
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 3.5e-55 218.8 157 73.9
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 3.5e-55 218.8 167 70.7
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.5e-55 218.8 167 71.3
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 3.5e-55 218.8 167 71.3
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 3.5e-55 218.8 167 69.5
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.6e-55 218.4 167 70.1
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 4.6e-55 218.4 167 71.9
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.6e-55 218.4 157 70.7
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 6.0e-55 218.0 167 69.5
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.9e-55 217.6 167 71.3
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 7.9e-55 217.6 167 71.3
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 1.0e-54 217.2 154 74.7
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.0e-54 217.2 153 74.5
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.3e-54 216.9 167 66.5
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.3e-54 216.9 167 66.5
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 1.3e-54 216.9 162 71.6
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.7e-54 216.5 157 68.2
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.7e-54 216.5 157 68.2
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 2.3e-54 216.1 158 69.0
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.0e-54 215.7 167 70.7
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 3.9e-54 215.3 144 75.7
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 3.9e-54 215.3 167 67.1
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 3.9e-54 215.3 167 67.1
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 3.9e-54 215.3 167 67.1
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 3.9e-54 215.3 157 72.0
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 3.9e-54 215.3 176 67.0
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 5.1e-54 214.9 167 70.1
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 6.6e-54 214.5 167 71.3
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 6.6e-54 214.5 167 69.5
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 6.6e-54 214.5 162 70.4
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 8.7e-54 214.2 158 68.4
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 8.7e-54 214.2 154 74.0
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 8.7e-54 214.2 167 71.9
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 8.7e-54 214.2 153 72.5
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.1e-53 213.8 162 67.3
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.1e-53 213.8 167 68.9
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 1.1e-53 213.8 167 69.5
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.5e-53 213.4 158 70.3
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 1.5e-53 213.4 167 70.1
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 1.5e-53 213.4 167 72.5
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 2.5e-53 212.6 158 67.7
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 2.5e-53 212.6 158 67.7
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 2.5e-53 212.6 148 75.0
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 2.5e-53 212.6 167 68.3
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 3.3e-53 212.2 162 71.6
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 3.3e-53 212.2 167 68.9
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 3.3e-53 212.2 152 72.4
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 4.3e-53 211.8 169 69.8
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 9.6e-53 210.7 140 74.3
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 1.3e-52 210.3 167 67.7
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 1.3e-52 210.3 162 68.5
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.6e-52 209.9 156 69.9
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 1.6e-52 209.9 167 68.9
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 2.1e-52 209.5 158 70.3
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 3.6e-52 208.8 167 68.3
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 6.2e-52 208.0 161 67.1
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 1.4e-51 206.8 167 66.5
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.4e-51 206.8 141 72.3
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 2.4e-51 206.1 167 68.3
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 2.4e-51 206.1 167 64.7
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 5.3e-51 204.9 168 66.1
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 5.3e-51 204.9 167 67.7
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 5.3e-51 204.9 167 67.7
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 2.0e-50 203.0 160 66.9
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 2.0e-50 203.0 140 72.1
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 3.4e-50 202.2 140 72.9
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 4.5e-50 201.8 167 65.9
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 4.5e-50 201.8 139 71.2
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 5.8e-50 201.4 167 65.3
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 5.8e-50 201.4 144 69.4
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 5.8e-50 201.4 138 74.6
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 7.6e-50 201.1 140 72.9
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.3e-49 200.3 155 71.0
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 6.4e-49 198.0 167 64.1
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.4e-48 196.8 119 84.9
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 1.2e-47 193.7 152 69.1
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.7e-47 192.6 162 63.0
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 3.9e-46 188.7 169 62.1
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 8.7e-46 187.6 158 63.3
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 6.2e-44 181.4 116 78.4
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 4.0e-43 178.7 134 69.4
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 2.0e-42 176.4 107 81.3
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 7.6e-42 174.5 105 82.9
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 9.3e-40 167.5 105 78.1
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 2.1e-39 166.4 141 60.3
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 4.6e-39 165.2 156 59.0
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.0e-38 164.1 140 58.6
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 7.4e-37 157.9 116 64.7
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.3e-36 157.1 106 73.6
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 1.6e-36 156.8 139 56.8
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.8e-35 153.3 93 79.6
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 2.0e-34 149.8 93 77.4
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 5.0e-33 145.2 114 64.9
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.0e-25 120.9 76 76.3
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 7.4e-21 104.8 106 44.3
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.7e-15 85.5 106 50.0


User provided reference genes

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