Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p063470 Quercus lobata HOM05D005294 ORTHO05D006720 3.6e-266 921.0 466 100.0
Haze_25869 Corylus avellana HOM05D005294 ORTHO05D006720 1.1e-222 776.5 464 84.3
CiPaw.03G219800 Carya illinoinensis HOM05D005294 ORTHO05D006720 5.2e-220 767.7 465 81.9
Cfa003134 Carpinus fangiana HOM05D005294 ORTHO05D006720 1.3e-215 753.1 464 81.9
Atru.chr7.1522 Acer truncatum HOM05D005294 ORTHO05D006720 3.8e-199 698.4 466 72.3
Ciclev10008203m.g Citrus clementina HOM05D005294 ORTHO05D006720 6.6e-199 697.6 462 74.0
MD15G1202500 Malus domestica HOM05D005294 ORTHO05D006720 1.1e-198 696.8 464 75.0
Manes.16G105100 Manihot esculenta HOM05D005294 ORTHO05D006720 1.6e-197 693.0 461 73.5
Prupe.7G214700 Prunus persica HOM05D005294 ORTHO05D006720 6.1e-197 691.0 464 75.4
Potri.013G068200 Populus trichocarpa HOM05D005294 ORTHO05D006720 1.0e-196 690.3 461 74.4
MD02G1072700 Malus domestica HOM05D005294 ORTHO05D006720 2.0e-195 686.0 464 74.8
Sabra13G0059500 Salix brachista HOM05D005294 ORTHO05D006720 7.3e-190 667.5 513 67.4
TWI34G0876 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 1.2e-189 666.8 462 71.4
RcHm_v2.0_Chr2g0092581 Rosa chinensis HOM05D005294 ORTHO05D006720 4.7e-189 664.8 465 71.6
CANSAT64G1758 Cannabis sativa HOM05D005294 ORTHO05D006720 3.4e-187 658.7 468 71.4
Dinv36732 Davidia involucrata HOM05D005294 ORTHO05D006720 2.9e-186 655.6 464 70.3
Lalb_Chr18g0053011 Lupinus albus HOM05D005294 ORTHO05D006720 1.9e-185 652.9 467 69.6
COL.COLO4_18242 Corchorus olitorius HOM05D005294 ORTHO05D006720 4.1e-185 651.7 464 69.0
LjContig00141g0021499 Lotus japonicus HOM05D005294 ORTHO05D006720 9.2e-185 650.6 465 68.2
Cpa.g.sc32.101 Carica papaya HOM05D005294 ORTHO05D006720 3.5e-184 648.7 460 68.3
Glyma.14G065800 Glycine max HOM05D005294 ORTHO05D006720 1.3e-183 646.7 464 69.4
Thecc.09G094300 Theobroma cacao HOM05D005294 ORTHO05D006720 1.1e-182 643.7 468 68.6
GSVIVG01015248001 Vitis vinifera HOM05D005294 ORTHO05D006720 1.5e-182 643.3 462 68.4
FvH4_1g06810 Fragaria vesca HOM05D005294 ORTHO05D006720 5.6e-182 641.3 465 69.9
CSS0007070 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 9.5e-182 640.6 461 68.8
Lalb_Chr15g0084501 Lupinus albus HOM05D005294 ORTHO05D006720 9.5e-182 640.6 467 69.0
CSS0004577 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 1.2e-181 640.2 461 68.5
FAN23G1873 Fragaria x ananassa HOM05D005294 ORTHO05D006720 2.8e-181 639.0 465 69.5
Gohir.A06G070500 Gossypium hirsutum HOM05D005294 ORTHO05D006720 8.0e-181 637.5 468 67.5
Gohir.D06G069100 Gossypium hirsutum HOM05D005294 ORTHO05D006720 8.0e-181 637.5 468 67.5
Gorai.010G080700 Gossypium raimondii HOM05D005294 ORTHO05D006720 8.0e-181 637.5 468 67.5
TWI63G0491 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 8.0e-181 637.5 462 68.4
Glyma.02G250900 Glycine max HOM05D005294 ORTHO05D006720 1.4e-180 636.7 464 68.5
FAN26G2354 Fragaria x ananassa HOM05D005294 ORTHO05D006720 5.2e-180 634.8 462 69.7
Duzib168G2227 Durio zibethinus HOM05D005294 ORTHO05D006720 1.2e-179 633.6 468 66.9
arahy.Tifrunner.gnm1.ann1.T94LMP Arachis hypogaea HOM05D005294 ORTHO05D006720 1.5e-179 633.3 465 66.2
Phvul.008G230500 Phaseolus vulgaris HOM05D005294 ORTHO05D006720 2.6e-179 632.5 465 66.7
Lj7C671G8 Lonicera japonica HOM05D005294 ORTHO05D006720 5.8e-179 631.3 465 68.2
Eucgr.C03688 Eucalyptus grandis HOM05D005294 ORTHO05D006720 6.4e-178 627.9 464 65.7
arahy.Tifrunner.gnm1.ann1.CWN4E9 Arachis hypogaea HOM05D005294 ORTHO05D006720 1.1e-177 627.1 465 65.4
Rhsim05G0031400 Rhododendron simsii HOM05D005294 ORTHO05D006720 1.5e-174 616.7 464 66.8
Medtr5g080780 Medicago truncatula HOM05D005294 ORTHO05D006720 5.6e-174 614.8 464 66.2
Actinidia39748 Actinidia chinensis HOM05D005294 ORTHO05D006720 2.1e-173 612.8 463 66.5
PGR102G3363 Punica granatum HOM05D005294 ORTHO05D006720 6.2e-173 611.3 462 62.3
TPR.G25848 Trifolium pratense HOM05D005294 ORTHO05D006720 1.2e-171 607.1 466 65.2
CsaV3_2G001600 Cucumis sativus L. HOM05D005294 ORTHO05D006720 4.9e-170 601.7 464 64.4
ClCG11G001870 Citrullus lanatus HOM05D005294 ORTHO05D006720 3.2e-169 599.0 464 64.0
TAR624G1381 Trochodendron aralioides HOM05D005294 ORTHO05D006720 1.7e-167 593.2 465 63.0
vmacro10822 Vaccinium macrocarpon HOM05D005294 ORTHO05D006720 3.9e-167 592.0 498 61.4
FAN19G0312 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.5e-166 590.1 432 69.4
Psat2g038680 Pisum sativum HOM05D005294 ORTHO05D006720 1.9e-166 589.7 465 63.7
Sc08g0008210 Simmondsia chinensis HOM05D005294 ORTHO05D006720 2.5e-166 589.3 465 61.7
FAN26G0700 Fragaria x ananassa HOM05D005294 ORTHO05D006720 4.3e-166 588.6 432 69.2
VMungo0647G0234 Vigna mungo HOM05D005294 ORTHO05D006720 1.2e-165 587.0 463 65.2
Nitab4.5_0004011g0060 Nicotiana tabacum HOM05D005294 ORTHO05D006720 4.7e-165 585.1 465 62.4
Nitab4.5_0001492g0020 Nicotiana tabacum HOM05D005294 ORTHO05D006720 1.3e-162 577.0 462 61.5
Sed0020374 Sechium edule HOM05D005294 ORTHO05D006720 4.9e-162 575.1 464 61.6
DCAR_012006 Daucus carota HOM05D005294 ORTHO05D006720 8.4e-162 574.3 462 60.2
THA.LOC104811733 Tarenaya hassleriana HOM05D005294 ORTHO05D006720 8.4e-162 574.3 465 60.0
CAN.G142.7 Capsicum annuum HOM05D005294 ORTHO05D006720 7.8e-160 567.8 465 59.1
PGSC0003DMG400033362 Solanum tuberosum HOM05D005294 ORTHO05D006720 1.0e-159 567.4 466 59.2
BcaC01g06444 Brassica carinata HOM05D005294 ORTHO05D006720 1.5e-158 563.5 465 58.9
AL8G32570 Arabidopsis lyrata HOM05D005294 ORTHO05D006720 4.3e-158 562.0 464 58.8
Hund05510 Selenicereus undatus HOM05D005294 ORTHO05D006720 5.6e-158 561.6 466 59.9
C03p15490 Brassica napus HOM05D005294 ORTHO05D006720 8.1e-157 557.8 466 59.2
A03p13220 Brassica napus HOM05D005294 ORTHO05D006720 1.4e-156 557.0 466 58.8
BolC3t13987H Brassica oleracea HOM05D005294 ORTHO05D006720 1.8e-156 556.6 466 59.0
Carub.0008s1722 Capsella rubella HOM05D005294 ORTHO05D006720 3.1e-156 555.8 464 58.8
BcaB01g04417 Brassica carinata HOM05D005294 ORTHO05D006720 6.9e-156 554.7 467 58.7
BraA03t10634Z Brassica rapa HOM05D005294 ORTHO05D006720 9.9e-155 550.8 466 57.9
AT5G56740 Arabidopsis thaliana HOM05D005294 ORTHO05D006720 1.3e-154 550.4 464 58.2
CARHR270490 Cardamine hirsuta HOM05D005294 ORTHO05D006720 4.9e-154 548.5 465 57.6
Thhalv10013465m.g Eutrema salsugineum HOM05D005294 ORTHO05D006720 4.9e-154 548.5 464 57.8
MSTRG.19532 Avicennia marina HOM05D005294 ORTHO05D006720 1.1e-153 547.4 466 57.7
BcaB08g36064 Brassica carinata HOM05D005294 ORTHO05D006720 2.4e-153 546.2 470 57.4
Lsat_1_v5_gn_5_146040 Lactuca sativa HOM05D005294 ORTHO05D006720 4.2e-153 545.4 469 58.6
Cc06_g10960 Coffea canephora HOM05D005294 ORTHO05D006720 5.4e-153 545.0 435 63.4
Sopen02g017740 Solanum pennellii HOM05D005294 ORTHO05D006720 7.9e-152 541.2 464 58.4
Peaxi162Scf01468g00004 Petunia axillaris HOM05D005294 ORTHO05D006720 3.0e-151 539.3 461 59.7
BraA10t43499Z Brassica rapa HOM05D005294 ORTHO05D006720 1.1e-150 537.3 466 56.4
Sp6g18490 Schrenkiella parvula HOM05D005294 ORTHO05D006720 1.5e-150 537.0 464 57.3
Solyc02g068580.1 Solanum lycopersicum HOM05D005294 ORTHO05D006720 1.5e-150 537.0 464 57.8
A10p14080 Brassica napus HOM05D005294 ORTHO05D006720 3.3e-150 535.8 466 56.4
ECA234G1346 Erigeron canadensis HOM05D005294 ORTHO05D006720 7.3e-150 534.6 467 56.3
Aqoxy7G03926 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 2.8e-149 532.7 471 57.7
Haze_25870 Corylus avellana HOM05D005294 ORTHO05D006720 3.6e-149 532.3 432 67.8
Ca_05904_v3 Cicer arietinum L. HOM05D005294 ORTHO05D006720 1.8e-148 530.0 424 62.3
PSO210G3043 Papaver somniferum HOM05D005294 ORTHO05D006720 9.0e-148 527.7 469 56.9
HanXRQChr12g0355321 Helianthus annuus HOM05D005294 ORTHO05D006720 2.9e-146 522.7 464 55.6
PSO210G1233 Papaver somniferum HOM05D005294 ORTHO05D006720 8.4e-146 521.2 469 56.7
Migut.J00438 Erythranthe guttata HOM05D005294 ORTHO05D006720 2.4e-140 503.1 463 53.8
Ah.15g091540 Amaranthus hybridus HOM05D005294 ORTHO05D006720 1.2e-139 500.7 466 53.9
EL10Ac7g17721 Beta vulgaris HOM05D005294 ORTHO05D006720 1.6e-136 490.3 424 59.4
AUR62008827 Chenopodium quinoa HOM05D005294 ORTHO05D006720 1.0e-135 487.6 466 53.6
AUR62025414 Chenopodium quinoa HOM05D005294 ORTHO05D006720 7.4e-134 481.5 466 53.2
MBI04_g06995_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 6.2e-133 478.4 466 52.4
SGA_v2.0_scaffold62G21576 Striga asiatica HOM05D005294 ORTHO05D006720 1.2e-131 474.2 495 49.9
Aa31LG3G12690 Aethionema arabicum HOM05D005294 ORTHO05D006720 5.0e-130 468.8 465 51.2
Aqoxy4G01946 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 3.0e-127 459.5 441 52.8
HPP92_009085 Vanilla planifolia HOM05D005294 ORTHO05D006720 1.9e-126 456.8 458 51.1
BcaC04g20057 Brassica carinata HOM05D005294 ORTHO05D006720 2.2e-125 453.4 454 50.7
unitig_26.g9161 Utricularia gibba HOM05D005294 ORTHO05D006720 2.0e-123 446.8 492 47.6
Os09g0347800 Oryza sativa ssp. japonica HOM05D005294 ORTHO05D006720 2.5e-121 439.9 467 48.2
Zm00001eb310550 Zea mays HOM05D005294 ORTHO05D006720 3.2e-113 412.9 465 47.7
Nn6g35397 Nelumbo nucifera HOM05D005294 ORTHO05D006720 3.5e-99 366.3 306 59.5
ATR0705G179 Amborella trichopoda HOM05D005294 ORTHO05D006720 5.9e-99 365.5 424 43.4
MELO3C004615.2 Cucumis melo HOM05D005294 ORTHO05D006720 1.1e-97 361.3 281 61.6
C09p48310 Brassica napus HOM05D005294 ORTHO05D006720 6.8e-95 352.1 369 49.1
BolC9t57681H Brassica oleracea HOM05D005294 ORTHO05D006720 6.8e-95 352.1 369 49.1
SHI02790 Sapria himalayana HOM05D005294 ORTHO05D006720 5.0e-90 335.9 471 42.3
SGA_v2.0_scaffold10G05199 Striga asiatica HOM05D005294 ORTHO05D006720 1.2e-88 331.3 527 38.0
CDE09G1011 Ceratophyllum demersum HOM05D005294 ORTHO05D006720 1.1e-84 318.2 468 37.6
SEGI_34717 Sequoiadendron giganteum HOM05D005294 ORTHO05D006720 5.4e-84 315.8 494 36.2
Oeu052126.1 Olea europaea HOM05D005294 ORTHO05D006720 4.6e-67 259.6 329 46.8
Mapoly0079s0005 Marchantia polymorpha HOM05D005294 ORTHO05D006720 6.2e-64 249.2 516 31.4
Pp3c15_19200 Physcomitrium patens HOM05D005294 ORTHO05D006720 4.1e-60 236.5 477 31.9
MBI14_g43979_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 5.6e-49 199.5 192 52.1
CBR_g45363 Chara braunii HOM05D005294 ORTHO05D006720 2.4e-47 194.1 393 32.3
Actinidia25279 Actinidia chinensis HOM05D005294 ORTHO05D006720 2.0e-46 191.0 365 36.4
RcHm_v2.0_Chr2g0093921 Rosa chinensis HOM05D005294 ORTHO05D006720 1.0e-42 178.7 117 75.2
RcHm_v2.0_Chr2g0093931 Rosa chinensis HOM05D005294 ORTHO05D006720 5.1e-42 176.4 128 68.8
Zm00001eb301910 Zea mays HOM05D005294 ORTHO05D006720 9.6e-41 172.2 162 50.6
Zm00001eb171070 Zea mays HOM05D005294 ORTHO05D006720 1.6e-40 171.4 162 49.4
Aa31LG3G12580 Aethionema arabicum HOM05D005294 ORTHO05D006720 6.4e-37 159.5 128 55.5
Aa31LG3G12620 Aethionema arabicum HOM05D005294 ORTHO05D006720 6.4e-37 159.5 128 55.5
Aa31sc2040G10 Aethionema arabicum HOM05D005294 ORTHO05D006720 2.1e-35 154.5 125 55.2
Aa31LG3G12670 Aethionema arabicum HOM05D004235 ORTHO05D005157 1.9e-33 147.9 232 38.4
PRCOL_00004982 Prasinoderma coloniale HOM05D005294 ORTHO05D006720 7.4e-33 146.0 345 28.7
CARHR271620 Cardamine hirsuta HOM05D005294 ORTHO05D006720 6.2e-32 142.9 105 62.9
Aqoxy4G01950 Aquilegia oxysepala HOM05D002435 ORTHO05D002550 3.4e-30 137.1 217 39.6
Cre03.g186500 Chlamydomonas reinhardtii HOM05D005294 ORTHO05D006720 7.4e-25 119.4 297 26.9
MCO15G657 Micromonas commoda HOM05D005294 ORTHO05D006720 1.5e-22 111.7 459 22.4
SMO281G0026 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 1.0e-18 99.0 124 40.3
SMO244G0078 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 8.7e-18 95.9 170 35.3
Aqoxy4G01951 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 1.1e-15 89.0 72 58.3
SGA_v2.0_scaffold194G40752 Striga asiatica HOM05D005294 ORTHO05D006720 1.1e-12 79.0 73 49.3
Zm00001eb382850 Zea mays HOM05D005294 ORTHO05D006720 2.1e-11 74.7 95 40.0
GSVIVG01038419001 Vitis vinifera HOM05D005294 ORTHO05D008307 3.6e-11 73.9 38 84.2
Zm00001eb383990 Zea mays HOM05D005294 ORTHO05D006720 4.6e-11 73.6 88 42.0
GSVIVG01027373001 Vitis vinifera HOM05D005294 ORTHO05D006720 5.1e-10 70.1 39 76.9
Cc06_g10970 Coffea canephora HOM05D005294 ORTHO05D038989 5.3e-07 60.1 40 60.0
Zm00001eb301930 Zea mays HOM05D005294 ORTHO05D006720 6.9e-07 59.7 90 36.7


User provided reference genes

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