Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 2.7e-283 978.0 499 100.0
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 9.4e-228 793.5 500 81.2
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 2.0e-222 775.8 500 80.2
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 5.6e-196 688.0 500 73.0
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 1.6e-187 659.8 499 69.5
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 3.2e-183 645.6 501 66.9
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 4.0e-178 628.6 499 64.7
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.5e-177 626.7 499 64.9
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 3.4e-177 625.5 501 65.5
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 9.9e-177 624.0 500 64.6
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 9.2e-175 617.5 505 65.7
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 6.0e-174 614.8 502 63.1
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 2.5e-172 609.4 504 62.5
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.4e-170 603.6 487 63.9
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 4.0e-170 602.1 507 63.9
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 8.9e-170 600.9 487 63.4
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 9.9e-169 597.4 507 64.1
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 1.7e-168 596.7 508 62.0
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 5.4e-167 591.7 516 61.2
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 2.7e-166 589.3 500 62.2
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 1.9e-164 583.2 498 62.0
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 1.3e-163 580.5 509 62.3
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 2.1e-163 579.7 499 62.7
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 4.0e-162 575.5 505 61.4
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 9.0e-162 574.3 505 61.0
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 9.9e-161 570.9 499 57.9
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 1.4e-159 567.0 503 60.2
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 2.7e-158 562.8 499 59.3
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 9.0e-154 547.7 500 59.0
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.7e-152 543.5 500 59.2
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 3.0e-149 532.7 511 57.3
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 1.9e-148 530.0 418 64.4
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 3.3e-148 529.3 433 65.6
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 4.3e-148 528.9 501 56.1
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 4.8e-147 525.4 517 55.7
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 8.1e-147 524.6 488 55.5
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 1.7e-144 516.9 507 55.4
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 3.8e-144 515.8 505 55.0
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 1.4e-143 513.8 504 55.2
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 1.2e-142 510.8 504 53.8
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 4.6e-142 508.8 505 54.7
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 1.3e-141 507.3 502 54.6
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 2.3e-141 506.5 427 63.2
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 3.0e-141 506.1 502 56.0
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 3.3e-140 502.7 515 53.4
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 3.4e-137 492.7 421 63.2
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 7.6e-137 491.5 415 61.7
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 1.3e-136 490.7 498 54.0
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 2.2e-136 490.0 415 61.7
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 1.4e-135 487.3 525 51.0
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 1.6e-134 483.8 416 60.3
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 3.5e-134 482.6 509 53.8
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 3.5e-134 482.6 503 54.9
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 4.6e-134 482.3 511 53.2
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 1.8e-133 480.3 511 53.6
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 3.3e-132 476.1 514 51.0
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 9.7e-132 474.6 512 50.8
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 1.3e-131 474.2 512 50.8
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 3.7e-131 472.6 512 51.0
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 1.1e-130 471.1 521 51.1
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 6.9e-130 468.4 511 51.3
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 1.0e-128 464.5 516 49.8
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 2.2e-128 463.4 446 53.8
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 8.5e-128 461.5 509 51.9
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 4.5e-121 439.1 509 51.1
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 2.2e-120 436.8 512 49.0
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 7.9e-118 428.3 415 55.4
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.5e-111 407.5 311 66.2
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 3.0e-109 399.8 463 50.8
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 6.7e-109 398.7 411 49.9
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 3.8e-104 382.9 418 51.0
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 2.6e-100 370.2 513 44.4
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 7.5e-100 368.6 362 57.2
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 1.1e-90 338.2 242 67.8
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 4.6e-81 306.2 553 37.1
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 1.4e-74 284.6 515 38.3
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 5.4e-74 282.7 561 35.8
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 1.5e-71 274.6 504 36.9
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.0e-48 198.7 165 61.8
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 8.7e-40 169.1 472 26.9
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 6.0e-33 146.4 444 28.8
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 1.3e-32 145.2 117 64.1
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 1.8e-16 91.7 248 31.0
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 1.9e-15 88.2 440 26.1
CBR_g17901 Chara braunii HOM05D007800 ORTHO05D009881 1.5e-07 62.0 274 24.8


User provided reference genes

Program Settings