Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 0.0e+00 1144.8 588 100.0
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.9e-166 590.1 551 61.2
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.2e-144 517.7 612 51.6
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 3.1e-129 466.5 623 47.8
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 5.9e-120 435.6 596 48.2
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 5.9e-120 435.6 695 43.3
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 4.2e-102 376.3 613 43.6
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 9.4e-102 375.2 620 40.8
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 3.5e-96 356.7 597 40.7
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 3.5e-96 356.7 596 41.1
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 2.9e-95 353.6 590 41.5
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 5.0e-95 352.8 600 40.2
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.9e-94 350.9 598 40.6
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.7e-93 347.1 599 40.2
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.2e-91 341.7 578 40.3
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.5e-91 339.0 587 40.0
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 4.5e-88 329.7 615 38.9
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.3e-87 328.2 600 38.8
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 5.5e-86 322.8 639 36.8
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.2e-83 315.1 680 35.9
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 4.4e-83 313.2 610 38.0
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.2e-82 310.8 610 38.0
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.0e-81 305.8 611 38.0
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.3e-79 301.6 565 38.2
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 3.8e-79 300.1 589 39.7
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 7.2e-78 295.8 589 38.0
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 9.5e-78 295.4 601 34.6
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 8.9e-76 288.9 620 34.0
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 4.9e-74 283.1 618 34.0
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 2.4e-73 280.8 575 36.5
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 4.6e-72 276.6 679 34.2
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 1.0e-71 275.4 420 44.3
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 6.6e-71 272.7 702 33.6
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 3.4e-67 260.4 659 32.6
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 4.4e-67 260.0 633 35.1
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 1.7e-66 258.1 611 34.4
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.4e-60 238.4 633 33.2
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 6.8e-60 236.1 644 33.1
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 1.2e-59 235.3 625 33.1
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 3.4e-59 233.8 607 30.0
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 2.2e-58 231.1 610 34.3
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 8.3e-58 229.2 630 32.2
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 4.6e-56 223.4 637 31.1
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 3.0e-55 220.7 618 30.9
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.4e-52 211.8 525 32.2
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 5.2e-52 209.9 545 33.0
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.2e-51 208.8 739 27.6
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 5.8e-51 206.5 593 31.2
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 1.7e-50 204.9 798 28.1
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 2.9e-50 204.1 641 31.5
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 1.1e-49 202.2 597 31.2
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 3.2e-49 200.7 481 35.3
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 1.2e-48 198.7 785 26.6
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 2.7e-48 197.6 300 43.7
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.3e-47 195.3 559 32.0
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.7e-47 194.9 332 42.2
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.9e-47 193.7 751 28.0
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 1.9e-46 191.4 595 28.2
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 3.3e-46 190.7 611 30.6
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 3.3e-46 190.7 574 30.0
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 5.6e-46 189.9 619 28.9
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 7.3e-46 189.5 467 33.0
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 1.4e-44 185.3 327 40.7
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 2.0e-43 181.4 326 41.1
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 3.2e-41 174.1 584 31.5
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 7.1e-41 172.9 779 26.7
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.6e-40 171.8 672 27.8
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 4.6e-40 170.2 644 28.4
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 7.8e-40 169.5 346 39.3
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 2.3e-39 167.9 305 39.3
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 1.9e-38 164.9 328 36.0
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.9e-38 164.9 294 40.1
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.3e-37 162.2 294 39.8
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.8e-37 161.0 294 39.5
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 5.8e-35 153.3 209 44.5
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 9.9e-35 152.5 148 55.4
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.3e-34 152.1 388 33.5
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 2.2e-34 151.4 262 40.8
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 4.9e-34 150.2 186 44.1
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.7e-31 141.7 359 31.5
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 2.3e-31 141.4 584 28.8
MD02G1078500 Malus domestica HOM05D006771 ORTHO05D008296 1.1e-30 139.0 286 37.1
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 3.3e-30 137.5 123 58.5
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.6e-29 135.2 596 26.0
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 2.4e-28 131.3 589 25.8
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 4.0e-28 130.6 589 26.0
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.0e-27 128.3 135 51.1
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 4.5e-27 127.1 595 27.6
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.7e-26 125.2 706 23.2
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 2.9e-26 124.4 582 25.9
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 2.9e-26 124.4 583 25.6
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 3.2e-25 120.9 113 47.8
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 7.1e-25 119.8 573 25.5
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 6.7e-23 113.2 317 31.9
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.5e-22 112.1 467 26.3
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 3.3e-22 110.9 347 30.8
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 1.1e-20 105.9 304 29.6
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 2.4e-20 104.8 157 40.1
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 3.1e-20 104.4 132 43.2
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 4.9e-18 97.1 224 33.0
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 6.5e-18 96.7 60 75.0
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 6.5e-18 96.7 116 43.1
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 4.6e-16 90.5 122 39.3
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.0e-15 89.4 100 44.0
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.3e-15 89.0 648 23.8
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 8.7e-15 86.3 118 39.0
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.6e-13 82.0 100 40.0
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.6e-13 82.0 100 40.0
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 2.1e-13 81.6 302 27.8
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 4.8e-13 80.5 360 27.2
Actinidia29884 Actinidia chinensis HOM05D006771 ORTHO05D008296 4.1e-12 77.4 126 38.1
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 2.2e-10 71.6 103 33.0
Sc18g0002050 Simmondsia chinensis HOM05D006771 ORTHO05D008296 1.4e-09 68.9 220 27.7
Lalb_Chr08g0232041 Lupinus albus HOM05D006771 ORTHO05D008296 1.9e-09 68.6 268 27.2
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 2.7e-08 64.7 91 39.6
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 5.1e-07 60.5 75 38.7


User provided reference genes

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