Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 2.3e-205 718.8 383 100.0
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 2.3e-205 718.8 383 100.0
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 6.2e-171 604.4 366 87.2
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 2.6e-169 599.0 366 86.9
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 6.4e-168 594.3 383 83.0
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 6.4e-168 594.3 378 82.8
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 5.4e-167 591.3 384 82.3
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 9.3e-167 590.5 374 85.0
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 6.0e-166 587.8 373 83.6
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 7.9e-166 587.4 384 78.4
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 1.0e-165 587.0 372 82.8
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 3.0e-165 585.5 385 81.3
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 3.0e-165 585.5 384 78.6
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 6.6e-165 584.3 386 81.9
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 1.5e-164 583.2 364 83.0
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 1.5e-164 583.2 383 80.7
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.5e-164 582.4 386 80.6
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 3.3e-164 582.0 386 80.6
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 7.3e-164 580.9 380 81.3
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 7.3e-164 580.9 378 81.7
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.6e-163 579.7 352 86.1
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 2.8e-163 578.9 366 84.2
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 8.1e-163 577.4 386 79.8
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.1e-162 577.0 352 85.8
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 1.8e-162 576.2 379 79.9
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 1.8e-162 576.2 388 76.3
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.8e-162 576.2 352 86.1
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 2.4e-162 575.9 371 80.9
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 4.0e-162 575.1 370 82.7
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 4.0e-162 575.1 381 81.9
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 1.5e-161 573.2 347 85.6
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.5e-161 573.2 347 85.6
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.6e-161 572.4 383 76.5
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 2.6e-161 572.4 364 81.6
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.5e-161 571.6 347 86.2
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 5.8e-161 571.2 382 80.4
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.3e-160 570.1 384 80.2
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 1.3e-160 570.1 385 80.0
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 2.2e-160 569.3 364 83.0
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 2.2e-160 569.3 367 82.6
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 3.8e-160 568.5 384 79.7
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 6.4e-160 567.8 368 76.6
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 1.1e-159 567.0 353 84.4
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.9e-159 566.2 375 81.9
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.9e-159 566.2 368 82.1
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 2.4e-159 565.8 364 83.2
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 2.4e-159 565.8 364 83.2
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 4.2e-159 565.1 375 80.8
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.2e-158 563.5 355 83.4
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.2e-158 563.5 367 80.4
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 1.6e-158 563.1 366 82.2
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 3.5e-158 562.0 361 82.3
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 3.5e-158 562.0 366 77.6
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 4.6e-158 561.6 364 83.2
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 1.3e-157 560.1 360 83.1
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 1.3e-157 560.1 384 78.9
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.3e-157 560.1 381 79.3
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 2.3e-157 559.3 348 82.5
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 3.0e-157 558.9 376 80.6
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 5.1e-157 558.1 375 76.8
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 3.3e-156 555.4 368 79.9
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 5.6e-156 554.7 355 78.9
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 7.4e-156 554.3 372 79.6
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 7.4e-156 554.3 365 81.6
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 7.4e-156 554.3 363 79.9
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 9.6e-156 553.9 371 74.9
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 1.3e-155 553.5 383 78.3
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 1.6e-155 553.1 362 77.9
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 1.6e-155 553.1 386 75.1
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 2.1e-155 552.7 375 77.9
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 2.1e-155 552.7 350 81.1
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 3.7e-155 552.0 379 77.3
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 4.8e-155 551.6 385 74.0
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 6.2e-155 551.2 362 77.3
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 6.2e-155 551.2 377 72.9
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 6.2e-155 551.2 375 78.7
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 6.2e-155 551.2 391 76.0
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 8.1e-155 550.8 359 78.6
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 1.8e-154 549.7 365 81.1
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 1.8e-154 549.7 365 81.1
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 2.4e-154 549.3 385 72.5
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 4.0e-154 548.5 383 77.3
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 4.0e-154 548.5 365 75.9
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 1.2e-153 547.0 373 75.1
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 2.6e-153 545.8 385 71.9
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 2.6e-153 545.8 377 78.2
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.5e-153 545.0 377 78.0
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 4.5e-153 545.0 365 75.6
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 5.8e-153 544.7 401 75.6
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 5.8e-153 544.7 369 74.0
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 5.8e-153 544.7 385 71.7
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 7.6e-153 544.3 369 73.7
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.7e-152 543.1 380 73.4
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 2.2e-152 542.7 365 75.3
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.9e-152 542.3 377 78.0
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.8e-152 542.0 384 71.4
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 1.4e-151 540.0 355 76.3
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.4e-151 540.0 329 80.9
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 3.2e-151 538.9 368 77.4
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 5.5e-151 538.1 475 65.5
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 1.2e-150 537.0 344 81.1
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 4.6e-150 535.0 400 69.2
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 3.0e-149 532.3 377 72.9
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 3.0e-149 532.3 365 77.3
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 1.5e-148 530.0 374 77.0
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 1.9e-148 529.6 356 77.8
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 5.7e-148 528.1 366 73.5
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 1.3e-147 526.9 364 73.4
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 2.8e-147 525.8 317 79.8
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 3.7e-147 525.4 363 72.7
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 4.8e-147 525.0 366 74.6
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 1.1e-146 523.9 307 84.4
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 3.1e-146 522.3 383 72.8
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 9.0e-146 520.8 364 72.5
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 9.0e-146 520.8 355 73.8
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 7.6e-145 517.7 307 81.1
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 8.4e-144 514.2 364 71.7
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 7.2e-143 511.1 384 74.0
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.2e-142 510.4 362 70.7
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 6.1e-142 508.1 339 75.2
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 3.0e-141 505.8 359 70.8
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 2.5e-140 502.7 397 69.0
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 2.2e-139 499.6 364 70.1
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 2.8e-139 499.2 366 69.7
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 1.4e-138 496.9 300 80.3
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.7e-136 490.0 294 87.4
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 2.2e-136 489.6 358 76.3
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.9e-136 489.2 366 74.3
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 5.0e-136 488.4 384 71.6
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 1.9e-135 486.5 380 71.1
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 7.2e-135 484.6 370 71.4
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 8.8e-133 477.6 355 71.8
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 1.4e-130 470.3 392 64.5
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 1.1e-127 460.7 281 78.6
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 3.2e-127 459.1 322 74.2
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 4.7e-126 455.3 298 71.8
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 8.8e-125 451.1 325 65.5
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 7.7e-121 438.0 356 67.4
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 3.8e-120 435.6 300 67.7
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 5.0e-120 435.3 345 61.2
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 2.5e-119 433.0 266 80.5
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 8.0e-118 427.9 363 58.4
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.0e-117 427.6 373 61.1
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 4.4e-116 422.2 299 66.9
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.6e-113 413.7 378 65.6
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.9e-112 409.5 346 59.0
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 1.6e-110 403.7 221 88.2
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 5.7e-108 395.2 426 53.3
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 4.7e-102 375.6 237 77.2
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 2.0e-92 343.6 299 57.2
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.5e-87 327.4 211 71.1
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 1.4e-85 320.9 205 81.0
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 3.3e-71 273.1 150 86.0
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 8.9e-61 238.4 370 46.5
Cc02_g26660 Coffea canephora HOM05D003970 ORTHO05D004615 2.3e-56 223.8 170 71.8
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 1.5e-55 221.1 193 58.0
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 1.1e-42 178.3 164 56.7
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 9.3e-34 148.7 97 77.3
Cre03.g207351 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 2.4e-29 134.0 307 30.9
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 2.2e-27 127.5 106 64.2
MCO07G676 Micromonas commoda HOM05D003970 ORTHO05D004615 5.7e-23 112.8 364 27.7
TPR.G277 Trifolium pratense HOM05D003970 ORTHO05D004615 8.2e-22 109.0 65 76.9
PRCOL_00002316 Prasinoderma coloniale HOM05D003970 ORTHO05D004615 1.4e-21 108.2 297 27.3
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 6.9e-21 105.9 249 34.5
Cpa.g.sc28.102 Carica papaya HOM05D003970 ORTHO05D004615 1.1e-18 98.6 89 78.7
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 2.5e-18 97.4 69 72.5
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 2.5e-18 97.4 69 72.5
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 9.4e-18 95.5 69 72.5
COL.COLO4_18144 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.2e-17 95.1 90 78.9
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 3.6e-17 93.6 377 25.7
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 1.0e-16 92.0 78 69.2
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 5.1e-16 89.7 59 71.2
Cfa024865 Carpinus fangiana HOM05D003970 ORTHO05D124560 3.2e-10 70.5 108 35.2
Cpa.g.c48203 Carica papaya HOM05D003970 ORTHO05D004615 3.6e-09 67.0 71 77.5
RcHm_v2.0_Chr1g0340041 Rosa chinensis HOM05D003970 ORTHO05D004615 3.6e-09 67.0 33 90.9
QL02p061328 Quercus lobata HOM05D000001 ORTHO05D000003 1.1e-07 62.0 49 63.3
Zm00001eb043210 Zea mays HOM05D008270 ORTHO05D010684 3.3e-07 60.5 38 73.7
Zm00001eb372010 Zea mays HOM05D008270 ORTHO05D010684 3.3e-07 60.5 38 73.7
Zm00001eb198340 Zea mays HOM05D003970 ORTHO05D004615 5.7e-07 59.7 38 71.1


User provided reference genes

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