Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p061167 Quercus lobata HOM05D000545 ORTHO05D000539 1.3e-134 483.0 240 100.0
QL02p061158 Quercus lobata HOM05D000545 ORTHO05D000539 4.0e-67 258.8 129 98.4
QL02p061202 Quercus lobata HOM05D000545 ORTHO05D000539 4.0e-67 258.8 129 98.4
QL02p061207 Quercus lobata HOM05D000545 ORTHO05D000539 4.0e-67 258.8 129 98.4
QL02p061234 Quercus lobata HOM05D000545 ORTHO05D000539 1.6e-55 220.3 144 79.9
CiPaw.03G210300 Carya illinoinensis HOM05D000545 ORTHO05D000539 2.0e-42 176.8 133 66.2
Atru.chr7.1659 Acer truncatum HOM05D000545 ORTHO05D000539 2.9e-33 146.4 131 58.0
Dinv25584 Davidia involucrata HOM05D000545 ORTHO05D000539 1.1e-32 144.4 118 63.6
TAR636G3070 Trochodendron aralioides HOM05D000545 ORTHO05D000539 1.3e-30 137.5 130 56.9
Dinv42365 Davidia involucrata HOM05D000545 ORTHO05D000539 5.1e-30 135.6 130 56.2
Thecc.09G081400 Theobroma cacao HOM05D000545 ORTHO05D000539 1.1e-29 134.4 130 55.4
GSVIVG01015120001 Vitis vinifera HOM05D000545 ORTHO05D000539 1.9e-29 133.7 132 53.0
Eucgr.C00842 Eucalyptus grandis HOM05D000545 ORTHO05D000539 2.5e-29 133.3 132 53.0
Potri.006G145100 Populus trichocarpa HOM05D000545 ORTHO05D000539 4.8e-28 129.0 125 56.8
Manes.16G097900 Manihot esculenta HOM05D000545 ORTHO05D000539 6.3e-28 128.6 129 55.8
TAR624G0895 Trochodendron aralioides HOM05D000545 ORTHO05D000539 1.1e-27 127.9 129 55.8
Cfa003034 Carpinus fangiana HOM05D000545 ORTHO05D000539 6.9e-27 125.2 81 74.1
Duzib150G0566 Durio zibethinus HOM05D000545 ORTHO05D000539 9.0e-27 124.8 132 50.0
Sabra06G0114700 Salix brachista HOM05D000545 ORTHO05D000539 2.6e-26 123.2 125 56.8
vmacro06313 Vaccinium macrocarpon HOM05D000545 ORTHO05D000539 7.6e-26 121.7 139 48.2
CSS0004932 Camellia sinensis var. sinensis HOM05D000545 ORTHO05D000539 8.5e-25 118.2 128 52.3
Gorai.013G226200 Gossypium raimondii HOM05D000545 ORTHO05D000539 1.1e-24 117.9 121 50.4
Prupe.7G203500 Prunus persica HOM05D000545 ORTHO05D000539 1.1e-24 117.9 131 55.0
Duzib187G0423 Durio zibethinus HOM05D000545 ORTHO05D000539 1.4e-24 117.5 133 51.1
Gohir.D13G197500 Gossypium hirsutum HOM05D000545 ORTHO05D000539 1.4e-24 117.5 119 51.3
TAR383G0575 Trochodendron aralioides HOM05D000545 ORTHO05D000539 9.3e-24 114.8 129 51.9
ClCG11G001580 Citrullus lanatus HOM05D000545 ORTHO05D000539 1.2e-23 114.4 137 47.4
Actinidia25222 Actinidia chinensis HOM05D005173 ORTHO05D006214 2.7e-23 113.2 129 49.6
TWI34G0738 Tripterygium wilfordii HOM05D000545 ORTHO05D000539 6.1e-23 112.1 129 53.5
Potri.018G064700 Populus trichocarpa HOM05D000545 ORTHO05D000539 7.9e-23 111.7 125 53.6
Sed0014370 Sechium edule HOM05D000545 ORTHO05D000539 1.0e-22 111.3 136 49.3
TWI32G0309 Tripterygium wilfordii HOM05D000545 ORTHO05D000539 1.3e-22 110.9 122 50.8
PSO210G1397 Papaver somniferum HOM05D000545 ORTHO05D000539 6.7e-22 108.6 129 45.7
TWI63G1580 Tripterygium wilfordii HOM05D000545 ORTHO05D000539 6.7e-22 108.6 122 50.8
TAR626G0411 Trochodendron aralioides HOM05D000545 ORTHO05D000539 6.7e-22 108.6 116 50.0
Actinidia39688 Actinidia chinensis HOM05D000545 ORTHO05D000539 1.1e-21 107.8 130 46.2
Gohir.A13G192100 Gossypium hirsutum HOM05D000545 ORTHO05D000539 2.5e-21 106.7 120 46.7
Nn6g35581 Nelumbo nucifera HOM05D000545 ORTHO05D000539 7.4e-21 105.1 126 50.0
MD02G1086200 Malus domestica HOM05D000545 ORTHO05D000539 9.7e-21 104.8 130 48.5
Sc08g0008730 Simmondsia chinensis HOM05D000545 ORTHO05D000539 2.8e-20 103.2 131 45.8
PSO210G7033 Papaver somniferum HOM05D000545 ORTHO05D000539 4.8e-20 102.4 125 44.0
Rhsim03G0230500 Rhododendron simsii HOM05D000545 ORTHO05D000539 1.1e-19 101.3 141 42.6
Duzib168G0742 Durio zibethinus HOM05D000545 ORTHO05D000539 1.4e-19 100.9 132 46.2
Lj7C682T15 Lonicera japonica HOM05D000545 ORTHO05D000539 1.4e-19 100.9 147 43.5
PGR142G2908 Punica granatum HOM05D000545 ORTHO05D000539 1.8e-19 100.5 145 44.8
AUR62029002 Chenopodium quinoa HOM05D000545 ORTHO05D000539 3.1e-19 99.8 129 42.6
Gohir.A06G075000 Gossypium hirsutum HOM05D000545 ORTHO05D000539 9.1e-19 98.2 132 43.2
Gorai.010G086300 Gossypium raimondii HOM05D000545 ORTHO05D000539 9.1e-19 98.2 132 43.9
EL10Ac8g19140 Beta vulgaris HOM05D000545 ORTHO05D000539 1.2e-18 97.8 124 43.5
CSS0005613 Camellia sinensis var. sinensis HOM05D000545 ORTHO05D000539 2.0e-18 97.1 127 43.3
FAN26G0698 Fragaria x ananassa HOM05D000545 ORTHO05D000539 4.5e-18 95.9 130 46.2
Sabra18G0057300 Salix brachista HOM05D000545 ORTHO05D000539 2.9e-17 93.2 110 51.8
FAN26G0115 Fragaria x ananassa HOM05D000545 ORTHO05D000539 5.0e-17 92.4 130 45.4
FAN28G2443 Fragaria x ananassa HOM05D000545 ORTHO05D000539 5.0e-17 92.4 130 45.4
Cc00_g19380 Coffea canephora HOM05D000545 ORTHO05D000539 6.5e-17 92.0 131 40.5
FvH4_1g08160 Fragaria vesca HOM05D000545 ORTHO05D000539 1.1e-16 91.3 130 44.6
FAN19G1174 Fragaria x ananassa HOM05D000545 ORTHO05D000539 1.1e-16 91.3 130 44.6
RcHm_v2.0_Chr2g0094231 Rosa chinensis HOM05D000545 ORTHO05D000539 3.2e-16 89.7 130 45.4
FAN23G1897 Fragaria x ananassa HOM05D000545 ORTHO05D000539 2.1e-15 87.0 130 43.8
CiPaw.01G221100 Carya illinoinensis HOM05D000545 ORTHO05D000539 3.6e-15 86.3 123 40.7
CANSAT56G3172 Cannabis sativa HOM05D000545 ORTHO05D000539 4.7e-15 85.9 132 42.4
Oeu051317.2 Olea europaea HOM05D000545 ORTHO05D000539 4.7e-15 85.9 129 42.6
MBI13_g29629_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 6.1e-15 85.5 129 42.6
Sc18g0002380 Simmondsia chinensis HOM05D000545 ORTHO05D000539 1.0e-14 84.7 129 39.5
CSS0035499 Camellia sinensis var. sinensis HOM05D000545 ORTHO05D000539 1.8e-14 84.0 134 38.8
Dinv37878 Davidia involucrata HOM05D000545 ORTHO05D000539 1.8e-14 84.0 117 40.2
MD15G1213400 Malus domestica HOM05D000545 ORTHO05D000539 2.3e-14 83.6 129 41.1
Dinv04022 Davidia involucrata HOM05D000545 ORTHO05D000539 3.0e-14 83.2 127 40.2
Manes.11G022300 Manihot esculenta HOM05D000545 ORTHO05D000539 3.9e-14 82.8 113 46.0
Duzib235G0161 Durio zibethinus HOM05D000545 ORTHO05D000539 6.7e-14 82.0 135 41.5
Duzib160G0266 Durio zibethinus HOM05D000545 ORTHO05D000539 8.8e-14 81.6 127 42.5
Ca_05016_v3 Cicer arietinum L. HOM05D000545 ORTHO05D000539 1.1e-13 81.3 129 41.9
Gohir.D04G009100 Gossypium hirsutum HOM05D000545 ORTHO05D000539 1.1e-13 81.3 128 40.6
Aqoxy7G01100 Aquilegia oxysepala HOM05D000545 ORTHO05D000539 5.7e-13 79.0 124 38.7
Thecc.06G117600 Theobroma cacao HOM05D000545 ORTHO05D000539 9.7e-13 78.2 128 41.4
Actinidia39090 Actinidia chinensis HOM05D000545 ORTHO05D000539 1.7e-12 77.4 119 38.7
Cpa.g.sc25.96 Carica papaya HOM05D000545 ORTHO05D000539 1.7e-12 77.4 127 43.3
Prupe.3G043900 Prunus persica HOM05D000545 ORTHO05D000539 1.7e-12 77.4 130 38.5
Ah.09g231290 Amaranthus hybridus HOM05D000545 ORTHO05D000539 2.8e-12 76.6 118 40.7
PSO063G1663 Papaver somniferum HOM05D000545 ORTHO05D000539 3.7e-12 76.3 126 35.7
Hma1.2p1_0291F.1_g115250 Hydrangea macrophylla HOM05D000545 ORTHO05D000539 4.8e-12 75.9 127 39.4
Glyma.07G036200 Glycine max HOM05D000545 ORTHO05D000539 6.3e-12 75.5 125 40.0
PSO421G0626 Papaver somniferum HOM05D000545 ORTHO05D000539 6.3e-12 75.5 125 36.8
COL.COLO4_30783 Corchorus olitorius HOM05D000545 ORTHO05D000539 8.2e-12 75.1 128 39.8
Duzib192G0141 Durio zibethinus HOM05D000545 ORTHO05D000539 1.1e-11 74.7 127 40.2
Gorai.012G010900 Gossypium raimondii HOM05D000545 ORTHO05D000539 1.1e-11 74.7 129 39.5
Phvul.010G133300 Phaseolus vulgaris HOM05D000545 ORTHO05D000539 1.1e-11 74.7 126 37.3
Actinidia32173 Actinidia chinensis HOM05D000545 ORTHO05D000539 1.4e-11 74.3 133 36.1
Lj3g0016238 Lotus japonicus HOM05D000545 ORTHO05D000539 2.4e-11 73.6 126 37.3
Gohir.A05G406500 Gossypium hirsutum HOM05D000545 ORTHO05D000539 4.1e-11 72.8 126 38.9
Gohir.D07G013500 Gossypium hirsutum HOM05D000545 ORTHO05D000539 4.1e-11 72.8 120 40.0
Gorai.001G014200 Gossypium raimondii HOM05D000545 ORTHO05D000539 1.2e-10 71.2 120 40.0
Manes.04G142600 Manihot esculenta HOM05D000545 ORTHO05D000539 1.2e-10 71.2 111 41.4
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 2.0e-10 70.5 67 56.7
RcHm_v2.0_Chr2g0144701 Rosa chinensis HOM05D000545 ORTHO05D000539 2.0e-10 70.5 114 40.4
CANSAT56G3072 Cannabis sativa HOM05D000545 ORTHO05D000539 4.5e-10 69.3 68 51.5
Gohir.A05G137400 Gossypium hirsutum HOM05D000545 ORTHO05D000539 4.5e-10 69.3 113 38.9
CDE05G3107 Ceratophyllum demersum HOM05D000545 ORTHO05D000539 5.9e-10 68.9 120 34.2
VMungo0331G1186 Vigna mungo HOM05D000545 ORTHO05D000539 5.9e-10 68.9 126 37.3
Gohir.A10G052400 Gossypium hirsutum HOM05D000545 ORTHO05D000539 7.7e-10 68.6 128 39.1
Rhsim08G0237000 Rhododendron simsii HOM05D000545 ORTHO05D000539 7.7e-10 68.6 162 32.7
CDE11G0745 Ceratophyllum demersum HOM05D000545 ORTHO05D000539 1.0e-09 68.2 123 35.0
Gohir.A07G013700 Gossypium hirsutum HOM05D000545 ORTHO05D000539 1.0e-09 68.2 120 39.2
Rhsim12G0208700 Rhododendron simsii HOM05D000545 ORTHO05D000539 1.0e-09 68.2 123 35.8
Atru.chr1.3899 Acer truncatum HOM05D000545 ORTHO05D000539 1.7e-09 67.4 129 38.0
CiPaw.02G137100 Carya illinoinensis HOM05D000545 ORTHO05D000539 2.9e-09 66.6 118 36.4
vmacro22214 Vaccinium macrocarpon HOM05D000545 ORTHO05D000539 3.8e-09 66.2 176 31.2
Glyma.16G005500 Glycine max HOM05D000545 ORTHO05D000539 1.1e-08 64.7 133 33.8
Gorai.009G143800 Gossypium raimondii HOM05D000545 ORTHO05D000539 1.1e-08 64.7 127 36.2
ATR0829G142 Amborella trichopoda HOM05D000545 ORTHO05D000539 1.4e-08 64.3 123 33.3
Ciclev10026020m.g Citrus clementina HOM05D000545 ORTHO05D000539 3.2e-08 63.2 123 37.4
FvH4_6g34360 Fragaria vesca HOM05D000545 ORTHO05D000539 3.2e-08 63.2 103 39.8
MD09G1186200 Malus domestica HOM05D000545 ORTHO05D000539 4.2e-08 62.8 110 40.9
vmacro17049 Vaccinium macrocarpon HOM05D000545 ORTHO05D000539 4.2e-08 62.8 122 35.2
FAN09G3653 Fragaria x ananassa HOM05D000545 ORTHO05D000539 7.2e-08 62.0 103 38.8
FAN05G5580 Fragaria x ananassa HOM05D000545 ORTHO05D000539 9.4e-08 61.6 103 38.8
Aqoxy7G04103 Aquilegia oxysepala HOM05D000545 ORTHO05D000539 1.2e-07 61.2 122 38.5
FAN14G4097 Fragaria x ananassa HOM05D000545 ORTHO05D000539 1.2e-07 61.2 109 38.5
Medtr8g019540 Medicago truncatula HOM05D000545 ORTHO05D000539 1.6e-07 60.8 127 36.2
arahy.Tifrunner.gnm1.ann1.E0X5DU Arachis hypogaea HOM05D000545 ORTHO05D000539 2.1e-07 60.5 49 57.1
arahy.Tifrunner.gnm1.ann1.K8VWCH Arachis hypogaea HOM05D000545 ORTHO05D000539 2.1e-07 60.5 49 57.1
DCAR_028285 Daucus carota HOM05D000545 ORTHO05D000539 2.1e-07 60.5 127 35.4
Ca_01231_v3 Cicer arietinum L. HOM05D000545 ORTHO05D000539 3.6e-07 59.7 124 35.5
Glyma.15G027400 Glycine max HOM05D000545 ORTHO05D000539 3.6e-07 59.7 124 33.1
CiPaw.04G146300 Carya illinoinensis HOM05D000545 ORTHO05D000539 4.7e-07 59.3 45 62.2
QL05p008693 Quercus lobata HOM05D000545 ORTHO05D000539 8.0e-07 58.5 124 30.6
Psat1g132840 Pisum sativum HOM05D000545 ORTHO05D000539 1.0e-06 58.2 48 58.3
Hund05748 Selenicereus undatus HOM05D000545 ORTHO05D000539 1.4e-06 57.8 127 30.7
TPR.G6525 Trifolium pratense HOM05D000545 ORTHO05D000539 1.4e-06 57.8 132 32.6
Lalb_Chr11g0074351 Lupinus albus HOM05D000545 ORTHO05D000539 1.8e-06 57.4 54 51.9
Migut.J00955 Erythranthe guttata HOM05D000545 ORTHO05D000539 2.3e-06 57.0 77 39.0
GSVIVG01016790001 Vitis vinifera HOM05D000545 ORTHO05D000539 2.3e-06 57.0 126 34.9
SEGI_08249 Sequoiadendron giganteum HOM05D000545 ORTHO05D000539 3.9e-06 56.2 107 38.3
Nitab4.5_0006017g0030 Nicotiana tabacum HOM05D000545 ORTHO05D000539 5.2e-06 55.8 103 35.0
Peaxi162Scf00498g00617 Petunia axillaris HOM05D000545 ORTHO05D000539 5.2e-06 55.8 98 35.7
TPR.G31544 Trifolium pratense HOM05D000545 ORTHO05D000539 8.8e-06 55.1 49 53.1


User provided reference genes

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