Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p059972 Quercus lobata HOM05D004935 ORTHO05D005676 4.6e-122 441.4 254 100.0
CiPaw.04G048500 Carya illinoinensis HOM05D004935 ORTHO05D005676 1.8e-70 270.0 249 64.3
CiPaw.03G075500 Carya illinoinensis HOM05D004935 ORTHO05D005676 9.1e-70 267.7 199 74.9
MD09G1265200 Malus domestica HOM05D004935 ORTHO05D005676 2.2e-63 246.5 202 70.3
Prupe.3G163400 Prunus persica HOM05D004935 ORTHO05D005676 1.4e-62 243.8 192 72.4
FAN28G0886 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.4e-62 243.0 197 69.0
Manes.01G121800 Manihot esculenta HOM05D004935 ORTHO05D005676 5.9e-61 238.4 197 68.5
FvH4_1g28640 Fragaria vesca HOM05D004935 ORTHO05D005676 1.0e-60 237.7 189 70.9
RcHm_v2.0_Chr3g0492651 Rosa chinensis HOM05D004935 ORTHO05D005676 1.7e-60 236.9 197 70.1
Thecc.04G001700 Theobroma cacao HOM05D004935 ORTHO05D005676 1.7e-60 236.9 201 66.7
Hma1.2p1_0034F.1_g021280 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 5.0e-60 235.3 196 68.9
CANSAT78G0803 Cannabis sativa HOM05D004935 ORTHO05D005676 8.6e-60 234.6 194 69.6
Manes.02G079800 Manihot esculenta HOM05D004935 ORTHO05D005676 8.6e-60 234.6 200 67.0
Gohir.A07G073800 Gossypium hirsutum HOM05D004935 ORTHO05D005676 3.3e-59 232.6 201 64.7
Cfa007772 Carpinus fangiana HOM05D004935 ORTHO05D005676 5.6e-59 231.9 306 52.9
FAN26G0615 Fragaria x ananassa HOM05D004935 ORTHO05D005676 5.6e-59 231.9 215 63.3
MD17G1261400 Malus domestica HOM05D004935 ORTHO05D005676 5.6e-59 231.9 199 67.8
Duzib138G1863 Durio zibethinus HOM05D004935 ORTHO05D005676 2.8e-58 229.6 194 68.0
Rhsim10G0182800 Rhododendron simsii HOM05D004935 ORTHO05D005676 4.7e-58 228.8 195 68.2
CSS0027542 Camellia sinensis var. sinensis HOM05D004935 ORTHO05D005676 8.0e-58 228.0 200 67.0
vmacro20490 Vaccinium macrocarpon HOM05D004935 ORTHO05D005676 1.8e-57 226.9 191 68.6
Aqoxy3G04045 Aquilegia oxysepala HOM05D004935 ORTHO05D005676 4.0e-57 225.7 193 66.3
Dinv28224 Davidia involucrata HOM05D004935 ORTHO05D005676 4.0e-57 225.7 202 64.4
Duzib133G0236 Durio zibethinus HOM05D004935 ORTHO05D005676 4.0e-57 225.7 201 65.2
Nitab4.5_0002465g0010 Nicotiana tabacum HOM05D004935 ORTHO05D005676 1.2e-56 224.2 192 64.1
Actinidia17180 Actinidia chinensis HOM05D004935 ORTHO05D005676 2.6e-56 223.0 202 63.9
Eucgr.J01625 Eucalyptus grandis HOM05D004935 ORTHO05D005676 3.4e-56 222.6 199 61.3
Ciclev10029179m.g Citrus clementina HOM05D004935 ORTHO05D005676 5.7e-56 221.9 199 64.8
Nitab4.5_0001088g0190 Nicotiana tabacum HOM05D004935 ORTHO05D005676 7.5e-56 221.5 191 64.9
PGSC0003DMG400013258 Solanum tuberosum HOM05D004935 ORTHO05D005676 9.8e-56 221.1 192 65.1
Peaxi162Scf00078g00178 Petunia axillaris HOM05D004935 ORTHO05D005676 2.9e-55 219.5 192 63.5
TPR.G12527 Trifolium pratense HOM05D004935 ORTHO05D005676 3.7e-55 219.2 239 57.7
TWI53G1040 Tripterygium wilfordii HOM05D004935 ORTHO05D005676 6.4e-55 218.4 197 67.0
Lj4A255T23 Lonicera japonica HOM05D004935 ORTHO05D005676 1.4e-54 217.2 189 66.1
Nn4g24526 Nelumbo nucifera HOM05D004935 ORTHO05D005676 1.4e-54 217.2 192 65.6
Migut.K01110 Erythranthe guttata HOM05D004935 ORTHO05D005676 1.8e-54 216.9 197 62.9
Gohir.D07G078500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.8e-54 216.9 201 60.7
Actinidia01601 Actinidia chinensis HOM05D004935 ORTHO05D005676 9.2e-54 214.5 197 63.5
Atru.chr1.1949 Acer truncatum HOM05D004935 ORTHO05D005676 1.6e-53 213.8 161 72.7
Dinv19063 Davidia involucrata HOM05D004935 ORTHO05D005676 2.0e-53 213.4 182 67.6
Medtr5g091900 Medicago truncatula HOM05D004935 ORTHO05D005676 2.7e-53 213.0 191 64.4
Glyma.18G042900 Glycine max HOM05D004935 ORTHO05D005676 3.5e-53 212.6 191 67.0
Potri.004G082300 Populus trichocarpa HOM05D004935 ORTHO05D005676 3.5e-53 212.6 195 64.6
Gorai.001G082900 Gossypium raimondii HOM05D004935 ORTHO05D005676 7.8e-53 211.5 203 60.1
Lj6g0018793 Lotus japonicus HOM05D004935 ORTHO05D005676 1.0e-52 211.1 190 65.3
Oeu032311.1 Olea europaea HOM05D004935 ORTHO05D005676 1.0e-52 211.1 199 62.8
Hma1.2p1_0158F.1_g069850 Hydrangea macrophylla HOM05D004935 ORTHO05D005676 1.3e-52 210.7 244 54.5
Sopen11g006600 Solanum pennellii HOM05D004935 ORTHO05D005676 1.7e-52 210.3 192 63.0
COL.COLO4_19777 Corchorus olitorius HOM05D004935 ORTHO05D005676 3.0e-52 209.5 206 59.7
Glyma.11G213800 Glycine max HOM05D004935 ORTHO05D005676 3.0e-52 209.5 191 65.4
MBI13_g35399_MAGBIO Magnolia biondii HOM05D004935 ORTHO05D005676 3.9e-52 209.1 189 64.0
Actinidia28792 Actinidia chinensis HOM05D004935 ORTHO05D005676 1.5e-51 207.2 202 60.4
Ca_06292_v3 Cicer arietinum L. HOM05D004935 ORTHO05D005676 1.5e-51 207.2 191 63.9
Solyc11g011760.3 Solanum lycopersicum HOM05D004935 ORTHO05D005676 1.9e-51 206.8 192 62.5
MSTRG.3688 Avicennia marina HOM05D004935 ORTHO05D005676 3.3e-51 206.1 201 60.7
PSO170G5471 Papaver somniferum HOM05D004935 ORTHO05D005676 3.3e-51 206.1 193 58.5
CsaV3_5G024270 Cucumis sativus L. HOM05D004935 ORTHO05D005676 4.3e-51 205.7 190 60.5
SGA_v2.0_scaffold45G17134 Striga asiatica HOM05D004935 ORTHO05D005676 4.3e-51 205.7 225 54.7
Gohir.A11G169300 Gossypium hirsutum HOM05D004935 ORTHO05D005676 5.6e-51 205.3 189 60.8
Phvul.001G228000 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 7.3e-51 204.9 189 63.0
THA.LOC104820912 Tarenaya hassleriana HOM05D004935 ORTHO05D005676 9.5e-51 204.5 193 62.2
Gorai.007G188100 Gossypium raimondii HOM05D004935 ORTHO05D005676 2.1e-50 203.4 189 61.4
PSO407G0171 Papaver somniferum HOM05D004935 ORTHO05D005676 2.1e-50 203.4 193 58.5
arahy.Tifrunner.gnm1.ann1.5XP26J Arachis hypogaea HOM05D004935 ORTHO05D005676 3.6e-50 202.6 189 62.4
ClCG01G008740 Citrullus lanatus HOM05D004935 ORTHO05D005676 4.7e-50 202.2 190 60.5
Gohir.D11G175500 Gossypium hirsutum HOM05D004935 ORTHO05D005676 1.0e-49 201.1 189 60.8
MELO3C025122.2 Cucumis melo HOM05D004935 ORTHO05D005676 1.8e-49 200.3 190 60.5
Sabra04G0054800 Salix brachista HOM05D004935 ORTHO05D005676 1.8e-49 200.3 200 60.0
TAR622G0462 Trochodendron aralioides HOM05D004935 ORTHO05D005676 1.8e-49 200.3 195 60.0
unitig_748.g8451 Utricularia gibba HOM05D004935 ORTHO05D005676 1.8e-49 200.3 190 61.1
Hund13074 Selenicereus undatus HOM05D004935 ORTHO05D005676 1.5e-48 197.2 195 57.9
VMungo1383G0526 Vigna mungo HOM05D004935 ORTHO05D005676 2.0e-48 196.8 191 61.3
Lj2A514G44 Lonicera japonica HOM05D004935 ORTHO05D005676 3.4e-48 196.1 220 52.7
Oeu029081.1 Olea europaea HOM05D004935 ORTHO05D005676 3.4e-48 196.1 175 65.7
AT5G16550 Arabidopsis thaliana HOM05D004935 ORTHO05D005676 3.7e-47 192.6 195 56.4
arahy.Tifrunner.gnm1.ann1.8KIW52 Arachis hypogaea HOM05D004935 ORTHO05D005676 2.4e-46 189.9 184 59.2
Lalb_Chr18g0053611 Lupinus albus HOM05D004935 ORTHO05D005676 2.4e-46 189.9 191 57.1
SalBow3G4475 Salvia bowleyana HOM05D004935 ORTHO05D005676 2.4e-46 189.9 165 65.5
AL6G27510 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 4.1e-46 189.1 196 56.6
Cc07_g13020 Coffea canephora HOM05D004935 ORTHO05D005676 7.0e-46 188.3 201 58.2
Carub.0006s1475 Capsella rubella HOM05D004935 ORTHO05D005676 2.0e-45 186.8 196 55.6
Lalb_Chr10g0104161 Lupinus albus HOM05D004935 ORTHO05D005676 4.6e-45 185.7 181 60.2
Zm00001eb179280 Zea mays HOM05D004935 ORTHO05D005676 1.7e-44 183.7 187 54.0
Psat2g014520 Pisum sativum HOM05D004935 ORTHO05D005676 6.6e-44 181.8 165 66.1
arahy.Tifrunner.gnm1.ann1.63R0A2 Arachis hypogaea HOM05D004935 ORTHO05D005676 1.1e-43 181.0 184 57.6
PGR042G3611 Punica granatum HOM05D004935 ORTHO05D005676 1.1e-43 181.0 182 58.2
BcaB08g36840 Brassica carinata HOM05D004935 ORTHO05D005676 1.5e-43 180.6 195 56.4
BcaC03g18499 Brassica carinata HOM05D004935 ORTHO05D005676 1.9e-43 180.3 194 56.2
CDE11G1189 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 9.5e-43 177.9 186 54.3
A10p22660 Brassica napus HOM05D004935 ORTHO05D005676 2.1e-42 176.8 187 57.8
BraA10t44327Z Brassica rapa HOM05D004935 ORTHO05D005676 2.1e-42 176.8 187 57.8
Lalb_Chr17g0345951 Lupinus albus HOM05D004935 ORTHO05D005676 2.8e-42 176.4 181 57.5
C09p60610 Brassica napus HOM05D004935 ORTHO05D005676 3.6e-42 176.0 180 57.8
BolC9t58894H Brassica oleracea HOM05D004935 ORTHO05D005676 3.6e-42 176.0 180 57.8
BcaC04g18869 Brassica carinata HOM05D004935 ORTHO05D005676 4.7e-42 175.6 180 57.8
C03p09070 Brassica napus HOM05D004935 ORTHO05D005676 1.4e-41 174.1 197 53.3
Zm00001eb041900 Zea mays HOM05D004935 ORTHO05D005676 3.1e-41 172.9 187 49.7
BolC3t13402H Brassica oleracea HOM05D004935 ORTHO05D005676 5.2e-41 172.2 197 53.3
BcaB01g04976 Brassica carinata HOM05D004935 ORTHO05D005676 1.5e-40 170.6 197 52.3
HPP92_017642 Vanilla planifolia HOM05D004935 ORTHO05D005676 2.0e-40 170.2 174 56.9
LjContig00141g0002036 Lotus japonicus HOM05D004935 ORTHO05D005676 3.4e-40 169.5 184 54.3
Psat2g044600 Pisum sativum HOM05D004935 ORTHO05D005676 7.5e-40 168.3 183 55.7
A02p03620 Brassica napus HOM05D004935 ORTHO05D005676 2.2e-39 166.8 243 46.5
CDE05G2820 Ceratophyllum demersum HOM05D004935 ORTHO05D005676 6.4e-39 165.2 186 53.8
BraA02t05331Z Brassica rapa HOM05D004935 ORTHO05D005676 7.1e-38 161.8 243 46.5
Sc11g0004790 Simmondsia chinensis HOM05D004935 ORTHO05D005676 1.2e-37 161.0 234 45.7
Lsat_1_v5_gn_8_111520 Lactuca sativa HOM05D004935 ORTHO05D005676 2.1e-37 160.2 175 56.0
Sp6g27610 Schrenkiella parvula HOM05D004935 ORTHO05D005676 1.7e-36 157.1 194 51.0
arahy.Tifrunner.gnm1.ann1.PKWW5Q Arachis hypogaea HOM05D004935 ORTHO05D005676 2.3e-36 156.8 148 64.9
Haze_14300 Corylus avellana HOM05D004935 ORTHO05D005676 2.3e-36 156.8 294 42.9
Medtr5g077280 Medicago truncatula HOM05D004935 ORTHO05D005676 3.0e-36 156.4 162 56.2
Glyma.02G242200 Glycine max HOM05D004935 ORTHO05D005676 3.9e-36 156.0 155 57.4
TAR629G3076 Trochodendron aralioides HOM05D004935 ORTHO05D005676 6.6e-36 155.2 195 51.3
TPR.G9990 Trifolium pratense HOM05D004935 ORTHO05D005676 1.5e-35 154.1 183 50.8
Phvul.008G238800 Phaseolus vulgaris HOM05D004935 ORTHO05D005676 1.6e-34 150.6 145 60.7
BcaC03g18497 Brassica carinata HOM05D004935 ORTHO05D005676 2.1e-34 150.2 230 44.8
C02p08410 Brassica napus HOM05D004935 ORTHO05D005676 2.1e-34 150.2 230 44.8
BolC2t06759H Brassica oleracea HOM05D004935 ORTHO05D005676 2.1e-34 150.2 230 44.8
Aa31LG11G13100 Aethionema arabicum HOM05D004935 ORTHO05D005676 2.8e-34 149.8 189 52.4
VMungo0647G1435 Vigna mungo HOM05D004935 ORTHO05D005676 1.2e-32 144.4 159 54.7
Thhalv10014473m.g Eutrema salsugineum HOM05D004935 ORTHO05D005676 1.5e-32 144.1 196 49.5
GSVIVG01026318001 Vitis vinifera HOM05D004935 ORTHO05D005676 2.6e-32 143.3 105 82.9
EL10Ac2g03209 Beta vulgaris HOM05D004935 ORTHO05D005676 8.4e-31 138.3 149 57.7
BraA03t10111Z Brassica rapa HOM05D000423 ORTHO05D005676 1.9e-30 137.1 135 60.7
A03p07850 Brassica napus HOM05D004935 ORTHO05D005676 2.7e-29 133.3 183 48.6
Sed0000771 Sechium edule HOM05D004935 ORTHO05D005676 1.0e-28 131.3 190 44.2
Oeu014715.1 Olea europaea HOM05D004935 ORTHO05D005676 1.3e-28 131.0 127 62.2
HanXRQChr15g0489811 Helianthus annuus HOM05D004935 ORTHO05D005676 1.7e-28 130.6 169 49.7
ECA246G1322 Erigeron canadensis HOM05D004935 ORTHO05D005676 6.2e-26 122.1 122 59.8
Sc11g0004530 Simmondsia chinensis HOM05D004935 ORTHO05D005676 2.4e-25 120.2 234 39.3
DCAR_003418 Daucus carota HOM05D004935 ORTHO05D005676 4.9e-23 112.5 114 57.0
Peaxi162Scf00085g00527 Petunia axillaris HOM05D004935 ORTHO05D005676 4.9e-23 112.5 92 67.4
AL3G36180 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 4.2e-22 109.4 113 58.4
AL92U10070 Arabidopsis lyrata HOM05D004935 ORTHO05D005676 1.6e-21 107.5 111 58.6
Mapoly0035s0070 Marchantia polymorpha HOM05D004935 ORTHO05D005676 7.8e-21 105.1 154 40.9
AagrBONN_evm.TU.Sc2ySwM_117.2252 Anthoceros agrestis HOM05D004935 ORTHO05D005676 2.1e-18 97.1 149 40.9
AL6G14310 Arabidopsis lyrata HOM05D000097 ORTHO05D005676 1.1e-17 94.7 112 55.4
Zm00001eb099130 Zea mays HOM05D004935 ORTHO05D005676 1.1e-17 94.7 111 51.4
CARHR196680 Cardamine hirsuta HOM05D004935 ORTHO05D005676 6.9e-17 92.0 85 67.1
FAN19G0113 Fragaria x ananassa HOM05D004935 ORTHO05D005676 2.6e-16 90.1 71 60.6
Pp3c25_6290 Physcomitrium patens HOM05D004935 ORTHO05D005676 4.9e-15 85.9 148 39.9
Pp3c6_9570 Physcomitrium patens HOM05D004935 ORTHO05D005676 2.7e-13 80.1 183 30.1
SEGI_39153 Sequoiadendron giganteum HOM05D004935 ORTHO05D005676 3.0e-12 76.6 114 44.7
MSTRG.15645 Avicennia marina HOM05D004935 ORTHO05D005676 5.1e-12 75.9 70 54.3
Medtr5g077270 Medicago truncatula HOM05D007893 ORTHO05D010042 7.4e-11 72.0 81 54.3
CARHR196690 Cardamine hirsuta HOM05D004935 ORTHO05D005676 1.3e-10 71.2 69 52.2
Cpa.g.sc178.1 Carica papaya HOM05D004935 ORTHO05D005676 3.6e-10 69.7 72 51.4
DCAR_003417 Daucus carota HOM05D004935 ORTHO05D005676 1.4e-09 67.8 117 41.0
EL10Ac2g03210 Beta vulgaris HOM05D004935 ORTHO05D005676 3.1e-09 66.6 55 56.4


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