Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p059469 Quercus lobata HOM05D002544 ORTHO05D007856 3.5e-186 654.8 333 100.0
QL03p020295 Quercus lobata HOM05D002544 ORTHO05D007856 4.4e-173 611.3 309 100.0
CiPaw.03G074200 Carya illinoinensis HOM05D002544 ORTHO05D007856 5.1e-137 491.5 311 79.7
Cfa007785 Carpinus fangiana HOM05D002544 ORTHO05D007856 2.5e-136 489.2 295 82.4
RcHm_v2.0_Chr3g0492061 Rosa chinensis HOM05D002544 ORTHO05D007856 4.3e-136 488.4 309 78.6
Prupe.3G165300 Prunus persica HOM05D002544 ORTHO05D007856 1.6e-135 486.5 311 78.5
FAN26G1528 Fragaria x ananassa HOM05D002544 ORTHO05D007856 3.7e-135 485.3 309 77.3
FvH4_1g30060 Fragaria vesca HOM05D002544 ORTHO05D007856 8.1e-135 484.2 309 77.7
FAN19G2740 Fragaria x ananassa HOM05D002544 ORTHO05D007856 8.1e-135 484.2 309 77.3
MD17G1267200 Malus domestica HOM05D002544 ORTHO05D007856 2.2e-132 476.1 310 76.8
Manes.02G078600 Manihot esculenta HOM05D002544 ORTHO05D007856 1.6e-130 469.9 309 74.4
Ciclev10000514m.g Citrus clementina HOM05D002544 ORTHO05D007856 6.0e-130 468.0 320 72.5
Hma1.2p1_0158F.1_g070010 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 6.0e-130 468.0 309 74.8
Duzib128G1814 Durio zibethinus HOM05D002544 ORTHO05D007856 1.3e-129 466.8 316 72.8
Thecc.10G105700 Theobroma cacao HOM05D002544 ORTHO05D007856 1.3e-129 466.8 316 74.4
Haze_14286 Corylus avellana HOM05D002544 ORTHO05D007856 1.8e-129 466.5 309 77.3
Dinv19050 Davidia involucrata HOM05D002544 ORTHO05D007856 1.8e-129 466.5 309 76.1
Actinidia17196 Actinidia chinensis HOM05D002544 ORTHO05D007856 1.3e-127 460.3 316 71.8
GSVIVG01030701001 Vitis vinifera HOM05D002544 ORTHO05D007856 2.1e-127 459.5 320 72.2
Atru.chr1.2033 Acer truncatum HOM05D002544 ORTHO05D007856 6.2e-127 458.0 320 70.9
CSS0008925 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 6.2e-127 458.0 311 73.6
CSS0046327 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 6.2e-127 458.0 311 73.6
Glyma.18G041900 Glycine max HOM05D002544 ORTHO05D007856 6.2e-127 458.0 309 73.8
Gohir.D05G289100 Gossypium hirsutum HOM05D002544 ORTHO05D007856 6.2e-127 458.0 316 73.1
Glyma.11G214700 Glycine max HOM05D002544 ORTHO05D007856 1.4e-126 456.8 309 73.5
TWI53G0412 Tripterygium wilfordii HOM05D002544 ORTHO05D007856 1.8e-126 456.4 309 73.8
VMungo1383G1931 Vigna mungo HOM05D002544 ORTHO05D007856 9.0e-126 454.1 309 72.5
TAR622G0658 Trochodendron aralioides HOM05D002544 ORTHO05D007856 1.2e-125 453.8 309 74.1
Gohir.A05G287900 Gossypium hirsutum HOM05D002544 ORTHO05D007856 4.5e-125 451.8 316 72.2
TPR.G23205 Trifolium pratense HOM05D002544 ORTHO05D007856 1.7e-124 449.9 309 72.8
Gorai.009G304200 Gossypium raimondii HOM05D002544 ORTHO05D007856 3.8e-124 448.7 316 72.2
Rhsim10G0180300 Rhododendron simsii HOM05D002544 ORTHO05D007856 8.4e-124 447.6 311 70.7
arahy.Tifrunner.gnm1.ann1.644H52 Arachis hypogaea HOM05D002544 ORTHO05D007856 1.1e-123 447.2 320 69.4
Phvul.001G228700 Phaseolus vulgaris HOM05D002544 ORTHO05D007856 1.1e-123 447.2 309 71.8
COL.COLO4_38545 Corchorus olitorius HOM05D002544 ORTHO05D007856 5.5e-123 444.9 309 71.2
Lalb_Chr18g0053551 Lupinus albus HOM05D002544 ORTHO05D007856 9.3e-123 444.1 310 72.3
Actinidia06481 Actinidia chinensis HOM05D002544 ORTHO05D007856 2.1e-122 443.0 311 70.4
CANSAT25G3407 Cannabis sativa HOM05D002544 ORTHO05D007856 2.1e-122 443.0 309 72.5
arahy.Tifrunner.gnm1.ann1.5E142I Arachis hypogaea HOM05D002544 ORTHO05D007856 2.7e-122 442.6 320 69.1
Potri.004G082900 Populus trichocarpa HOM05D002544 ORTHO05D007856 3.5e-122 442.2 309 73.5
Ca_17085_v3 Cicer arietinum L. HOM05D002544 ORTHO05D007856 6.0e-122 441.4 308 71.8
vmacro20587 Vaccinium macrocarpon HOM05D002544 ORTHO05D007856 2.3e-121 439.5 312 68.6
DCAR_014158 Daucus carota HOM05D002544 ORTHO05D007856 5.1e-121 438.3 320 67.2
Lj4A258G27 Lonicera japonica HOM05D002544 ORTHO05D007856 1.1e-120 437.2 320 69.4
Lj6g0017134 Lotus japonicus HOM05D002544 ORTHO05D007856 1.1e-120 437.2 309 70.9
Medtr3g065110 Medicago truncatula HOM05D002544 ORTHO05D007856 3.3e-120 435.6 309 70.6
Cc07_g13210 Coffea canephora HOM05D002544 ORTHO05D007856 7.4e-120 434.5 320 66.2
Hma1.2p1_0158F.1_g070020 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 2.8e-119 432.6 286 73.8
Eucgr.F02879 Eucalyptus grandis HOM05D002544 ORTHO05D007856 4.8e-119 431.8 311 70.4
Nn3g18419 Nelumbo nucifera HOM05D002544 ORTHO05D007856 6.9e-118 427.9 320 68.1
PGSC0003DMG400013310 Solanum tuberosum HOM05D002544 ORTHO05D007856 9.0e-118 427.6 308 69.2
Sabra04G0055200 Salix brachista HOM05D002544 ORTHO05D007856 4.5e-117 425.2 346 64.7
PGR004G1819 Punica granatum HOM05D002544 ORTHO05D007856 7.7e-117 424.5 310 67.4
FAN28G1090 Fragaria x ananassa HOM05D002544 ORTHO05D007856 1.0e-116 424.1 309 71.5
CAN.G222.63 Capsicum annuum HOM05D002544 ORTHO05D007856 1.7e-116 423.3 308 68.2
A04p06810 Brassica napus HOM05D002544 ORTHO05D007856 1.9e-115 419.9 321 64.8
Sopen11g006270 Solanum pennellii HOM05D002544 ORTHO05D007856 1.9e-115 419.9 308 68.2
Solyc11g011480.2 Solanum lycopersicum HOM05D002544 ORTHO05D007856 3.2e-115 419.1 308 67.9
THA.LOC104805637 Tarenaya hassleriana HOM05D002544 ORTHO05D007856 1.2e-114 417.2 354 61.6
Carub.0005s1906 Capsella rubella HOM05D002544 ORTHO05D007856 2.7e-114 416.0 317 65.9
ClCG05G010690 Citrullus lanatus HOM05D002544 ORTHO05D007856 2.7e-114 416.0 311 69.1
CsaV3_3G017820 Cucumis sativus L. HOM05D002544 ORTHO05D007856 2.7e-114 416.0 311 68.8
PSO063G6024 Papaver somniferum HOM05D002544 ORTHO05D007856 3.6e-114 415.6 307 66.8
Thhalv10010197m.g Eutrema salsugineum HOM05D002544 ORTHO05D007856 4.6e-114 415.2 317 65.0
AL5G33420 Arabidopsis lyrata HOM05D002544 ORTHO05D007856 7.9e-114 414.5 321 64.8
PSO782G4267 Papaver somniferum HOM05D002544 ORTHO05D007856 7.9e-114 414.5 307 66.8
Peaxi162Scf00464g00433 Petunia axillaris HOM05D002544 ORTHO05D007856 7.9e-114 414.5 310 66.1
AT3G52640 Arabidopsis thaliana HOM05D002544 ORTHO05D007856 1.4e-113 413.7 321 64.8
Sed0025118 Sechium edule HOM05D002544 ORTHO05D007856 1.4e-113 413.7 311 68.5
Oeu030291.2 Olea europaea HOM05D002544 ORTHO05D007856 2.3e-113 412.9 307 68.1
Nitab4.5_0011135g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 6.7e-113 411.4 310 66.1
Sc04g0005080 Simmondsia chinensis HOM05D002544 ORTHO05D007856 6.7e-113 411.4 319 64.3
Sp5g09650 Schrenkiella parvula HOM05D002544 ORTHO05D007856 8.8e-113 411.0 321 63.6
MBI13_g24909_MAGBIO Magnolia biondii HOM05D002544 ORTHO05D007856 4.3e-112 408.7 308 65.3
CARHR162460 Cardamine hirsuta HOM05D002544 ORTHO05D007856 5.7e-112 408.3 317 64.7
BraA04t16380Z Brassica rapa HOM05D002544 ORTHO05D007856 2.2e-111 406.4 347 59.9
Migut.K00933 Erythranthe guttata HOM05D002544 ORTHO05D007856 2.8e-111 406.0 310 64.8
Aqoxy3G04067 Aquilegia oxysepala HOM05D002544 ORTHO05D007856 4.8e-111 405.2 308 64.9
C04p40360 Brassica napus HOM05D002544 ORTHO05D007856 6.3e-111 404.8 321 63.6
Aa31LG10G7700 Aethionema arabicum HOM05D002544 ORTHO05D007856 8.2e-111 404.4 342 60.5
BcaC02g09234 Brassica carinata HOM05D002544 ORTHO05D007856 1.5e-109 400.2 326 61.7
BcaB02g08559 Brassica carinata HOM05D002544 ORTHO05D007856 5.9e-109 398.3 321 62.9
SGA_v2.0_scaffold45G17141 Striga asiatica HOM05D002544 ORTHO05D007277 5.0e-108 395.2 322 63.7
BolC4t25616H Brassica oleracea HOM05D002544 ORTHO05D007856 2.1e-106 389.8 351 58.1
AUR62037665 Chenopodium quinoa HOM05D002544 ORTHO05D007856 2.7e-106 389.4 320 60.9
HanXRQChr16g0532811 Helianthus annuus HOM05D002544 ORTHO05D007856 3.6e-106 389.0 310 64.8
Ah.10g032440 Amaranthus hybridus HOM05D002544 ORTHO05D007856 6.1e-106 388.3 351 57.8
AUR62040737 Chenopodium quinoa HOM05D002544 ORTHO05D007856 3.9e-105 385.6 320 60.6
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 5.1e-105 385.2 297 65.7
Lsat_1_v5_gn_3_63981 Lactuca sativa HOM05D002544 ORTHO05D007856 2.2e-103 379.8 291 65.3
Zm00001eb190390 Zea mays HOM05D002544 ORTHO05D007856 4.1e-102 375.6 307 62.5
ATR0118G015 Amborella trichopoda HOM05D002544 ORTHO05D007856 2.0e-101 373.2 310 62.3
EL10Ac2g03312 Beta vulgaris HOM05D002544 ORTHO05D007856 3.5e-101 372.5 320 58.4
Os02g0736500 Oryza sativa ssp. japonica HOM05D002544 ORTHO05D007856 3.8e-100 369.0 308 60.4
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 3.8e-100 369.0 314 60.5
Nitab4.5_0006562g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 2.5e-99 366.3 315 60.3
unitig_748.g8462 Utricularia gibba HOM05D002544 ORTHO05D007856 5.5e-99 365.2 310 61.0
HPP92_026943 Vanilla planifolia HOM05D002544 ORTHO05D007856 5.2e-97 358.6 309 59.5
CDE05G1209 Ceratophyllum demersum HOM05D002544 ORTHO05D007856 3.3e-96 355.9 309 58.9
Lj4C412G0 Lonicera japonica HOM05D002544 ORTHO05D007856 6.3e-95 351.7 374 53.2
SEGI_34556 Sequoiadendron giganteum HOM05D002544 ORTHO05D007856 7.7e-93 344.7 309 57.3
Hund13079 Selenicereus undatus HOM05D002544 ORTHO05D007856 2.9e-84 316.2 311 54.3
Cpa.g.sc116.76 Carica papaya HOM05D002544 ORTHO05D007856 5.0e-84 315.5 232 69.4
Psat5g119600 Pisum sativum HOM05D002544 ORTHO05D007856 8.8e-81 304.7 222 70.3
Mapoly0182s0008 Marchantia polymorpha HOM05D002544 ORTHO05D007856 9.8e-72 274.6 330 45.5
SMO115G0276 Selaginella moellendorffii HOM05D002544 ORTHO05D007856 6.3e-71 271.9 325 44.9
AagrBONN_evm.TU.Sc2ySwM_228.3612 Anthoceros agrestis HOM05D002544 ORTHO05D007856 8.9e-57 224.9 349 40.4
CBR_g26303 Chara braunii HOM05D002544 ORTHO05D000002 2.0e-48 197.2 334 36.2
Pp3c25_11440 Physcomitrium patens HOM05D002544 ORTHO05D007856 3.0e-44 183.3 240 42.5
Cre06.g294400 Chlamydomonas reinhardtii HOM05D002544 ORTHO05D007856 4.8e-26 122.9 322 34.5
Haze_22892 Corylus avellana HOM05D002544 ORTHO05D007856 7.4e-19 99.0 102 52.0
Hma1.2p1_0594F.1_g185860 Hydrangea macrophylla HOM05D006828 ORTHO05D008312 6.9e-17 92.4 73 58.9
C04p40260 Brassica napus HOM05D002544 ORTHO05D007856 1.7e-15 87.8 61 60.7
BolC4t25605H Brassica oleracea HOM05D002544 ORTHO05D007856 1.7e-15 87.8 61 60.7
MCO14G034 Micromonas commoda HOM05D002544 ORTHO05D007856 4.5e-08 63.2 309 24.9
HPP92_021312 Vanilla planifolia HOM05D002544 ORTHO05D007856 2.9e-07 60.5 58 53.4


User provided reference genes

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