Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 3.6e-88 328.2 160 100.0
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 1.1e-12 77.4 45 77.8
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 1.4e-12 77.0 45 77.8
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 1.4e-12 77.0 58 69.0
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 3.2e-12 75.9 60 65.0
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 4.2e-12 75.5 85 48.2
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 5.5e-12 75.1 68 57.4
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 9.3e-12 74.3 69 53.6
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 9.3e-12 74.3 45 75.6
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 9.3e-12 74.3 45 75.6
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 9.3e-12 74.3 45 75.6
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 9.3e-12 74.3 45 75.6
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 1.2e-11 73.9 58 65.5
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 1.2e-11 73.9 45 77.8
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 1.6e-11 73.6 49 71.4
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 2.1e-11 73.2 45 73.3
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 2.1e-11 73.2 47 76.6
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 2.7e-11 72.8 45 73.3
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 2.7e-11 72.8 45 80.0
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 3.5e-11 72.4 45 71.1
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 3.5e-11 72.4 96 42.7
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 3.5e-11 72.4 45 73.3
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 4.6e-11 72.0 44 77.3
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 4.6e-11 72.0 44 79.5
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 1.0e-10 70.9 45 75.6
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 1.0e-10 70.9 60 56.7
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 1.3e-10 70.5 45 75.6
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 1.3e-10 70.5 45 73.3
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 3.9e-10 68.9 44 72.7
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 5.1e-10 68.6 45 73.3
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 6.7e-10 68.2 81 48.1
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 1.5e-09 67.0 45 71.1
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 1.5e-09 67.0 45 66.7
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 1.5e-09 67.0 58 58.6
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 1.9e-09 66.6 43 69.8
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 2.5e-09 66.2 45 68.9
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 2.5e-09 66.2 36 86.1
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 2.5e-09 66.2 45 71.1
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 3.3e-09 65.9 45 64.4
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 5.7e-09 65.1 38 81.6
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 9.7e-09 64.3 45 64.4
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 1.3e-08 63.9 49 61.2
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 1.3e-08 63.9 45 62.2
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 1.6e-08 63.5 45 64.4
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 2.8e-08 62.8 89 40.4
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 3.7e-08 62.4 45 62.2
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 4.8e-08 62.0 69 50.7
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 4.8e-08 62.0 99 38.4
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 6.3e-08 61.6 49 59.2
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 8.2e-08 61.2 38 73.7
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 1.1e-07 60.8 49 57.1
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 2.4e-07 59.7 45 66.7
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 4.1e-07 58.9 36 72.2
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 5.3e-07 58.5 45 62.2
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 5.3e-07 58.5 39 71.8
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 9.0e-07 57.8 47 63.8
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 1.5e-06 57.0 43 67.4
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.5e-06 57.0 38 71.1
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 2.0e-06 56.6 35 71.4
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 3.4e-06 55.8 37 64.9
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 4.5e-06 55.5 47 57.4
RhsimUnG0189100 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.0e-05 54.3 47 57.4
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 1.0e-05 54.3 44 59.1


User provided reference genes

Program Settings