Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 3.1e-104 382.1 234 100.0
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 5.8e-63 245.0 182 67.0
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 5.9e-55 218.4 182 61.5
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 5.9e-55 218.4 185 62.2
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 5.9e-55 218.4 185 62.2
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 2.2e-54 216.5 185 59.5
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 2.2e-54 216.5 187 58.8
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 1.9e-53 213.4 183 60.1
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 1.2e-52 210.7 185 58.9
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 7.9e-52 208.0 182 59.3
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 8.7e-51 204.5 180 57.2
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 1.9e-50 203.4 180 57.8
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.5e-50 203.0 182 58.8
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 4.3e-50 202.2 182 56.6
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 1.6e-49 200.3 180 61.7
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 3.7e-49 199.1 180 56.1
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 1.2e-47 194.1 182 54.4
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 3.4e-47 192.6 180 56.1
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 3.4e-47 192.6 179 55.3
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 3.4e-47 192.6 179 55.3
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 4.5e-47 192.2 197 55.3
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 4.5e-47 192.2 173 57.2
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 7.7e-47 191.4 178 55.6
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 7.7e-47 191.4 184 55.4
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 2.9e-46 189.5 182 52.2
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 6.5e-46 188.3 176 55.1
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 1.9e-45 186.8 178 52.8
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 9.4e-45 184.5 178 56.2
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 1.6e-44 183.7 183 53.6
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 5.1e-43 178.7 181 53.0
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 1.5e-42 177.2 181 51.9
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 2.6e-42 176.4 166 53.6
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 4.4e-42 175.6 186 52.7
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 4.4e-42 175.6 184 54.3
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 5.7e-42 175.3 193 50.8
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 7.4e-42 174.9 184 52.7
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 2.2e-41 173.3 180 55.0
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 2.2e-41 173.3 181 52.5
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 2.2e-41 173.3 180 49.4
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 4.8e-41 172.2 188 54.8
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 6.3e-41 171.8 183 49.7
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 3.1e-40 169.5 218 45.4
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 4.1e-40 169.1 169 53.3
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 9.1e-40 167.9 182 50.5
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 1.5e-39 167.2 187 49.7
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 5.9e-39 165.2 183 50.8
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.0e-38 164.5 188 48.9
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 1.3e-38 164.1 119 63.0
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.2e-38 163.3 99 76.8
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 2.9e-38 162.9 182 50.5
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 3.8e-38 162.5 284 39.4
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 3.8e-38 162.5 183 51.9
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 8.5e-38 161.4 131 61.8
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 4.2e-37 159.1 183 50.3
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 4.2e-37 159.1 183 50.3
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 5.5e-37 158.7 182 50.0
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 5.5e-37 158.7 182 50.0
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 5.5e-37 158.7 182 50.0
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 7.2e-37 158.3 182 49.5
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 9.4e-37 157.9 136 58.8
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 1.2e-36 157.5 180 45.6
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 2.1e-36 156.8 177 49.7
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 1.0e-35 154.5 111 64.9
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 2.0e-34 150.2 167 50.9
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 2.0e-34 150.2 188 45.2
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 3.1e-32 142.9 183 48.6
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 3.5e-31 139.4 183 47.0
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 4.5e-31 139.0 119 55.5
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.0e-30 137.9 187 63.1
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.2e-30 136.7 183 47.5
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 3.8e-30 136.0 89 69.7
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 1.1e-29 134.4 182 46.2
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 2.5e-29 133.3 187 44.4
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 4.2e-29 132.5 101 60.4
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 7.2e-29 131.7 136 52.9
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 7.2e-29 131.7 110 62.7
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 2.7e-28 129.8 88 65.9
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 4.0e-27 125.9 111 58.6
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 2.0e-26 123.6 115 59.1
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 2.6e-26 123.2 131 45.8
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 4.1e-24 115.9 116 48.3
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 3.8e-22 109.4 112 53.6
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 5.0e-22 109.0 128 42.2
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-19 100.5 97 50.5
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 1.5e-18 97.4 98 89.8
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 1.5e-18 97.4 136 39.7
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 2.4e-16 90.1 120 45.0
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 1.0e-14 84.7 47 85.1
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.3e-14 84.3 70 51.4
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 2.1e-12 77.0 45 73.3
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 4.7e-12 75.9 64 54.7
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 2.8e-09 66.6 48 62.5


User provided reference genes

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