Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p057613 Quercus lobata HOM05D006042 ORTHO05D007658 1.5e-65 252.7 124 100.0
QL02p052540 Quercus lobata HOM05D006042 ORTHO05D007658 1.7e-24 116.3 71 83.1
CiPaw.03G059800 Carya illinoinensis HOM05D006042 ORTHO05D007658 9.1e-23 110.5 71 78.9
Ciclev10012434m.g Citrus clementina HOM05D006042 ORTHO05D007658 2.2e-21 105.9 71 76.1
Glyma.19G045600 Glycine max HOM05D006042 ORTHO05D007658 3.8e-21 105.1 71 71.8
PGR004G1523 Punica granatum HOM05D006042 ORTHO05D007658 3.8e-21 105.1 70 72.9
Gohir.A11G162500 Gossypium hirsutum HOM05D006042 ORTHO05D007658 6.5e-21 104.4 70 74.3
Gorai.007G180300 Gossypium raimondii HOM05D006042 ORTHO05D007658 6.5e-21 104.4 70 74.3
Gohir.D11G168732 Gossypium hirsutum HOM05D006042 ORTHO05D007658 8.5e-21 104.0 70 72.9
Lj2g0022623 Lotus japonicus HOM05D006042 ORTHO05D007658 8.5e-21 104.0 71 71.8
Phvul.004G063000 Phaseolus vulgaris HOM05D006042 ORTHO05D007658 1.1e-20 103.6 71 71.8
Ca_30067_v3 Cicer arietinum L. HOM05D006042 ORTHO05D007658 1.5e-20 103.2 70 71.4
ClCG11G005350 Citrullus lanatus HOM05D006042 ORTHO05D007658 1.9e-20 102.8 71 73.2
Sabra04G0078300 Salix brachista HOM05D006042 ORTHO05D007658 1.9e-20 102.8 71 70.4
CsaV3_5G039130 Cucumis sativus L. HOM05D006042 ORTHO05D007658 2.5e-20 102.4 71 73.2
Potri.004G102100 Populus trichocarpa HOM05D006042 ORTHO05D007658 2.5e-20 102.4 71 69.0
Thecc.04G137400 Theobroma cacao HOM05D006042 ORTHO05D007658 2.5e-20 102.4 70 71.4
Duzib138G1312 Durio zibethinus HOM05D006042 ORTHO05D007658 3.2e-20 102.1 69 72.5
TPR.G32447 Trifolium pratense HOM05D006042 ORTHO05D007658 7.2e-20 100.9 70 71.4
Psat1g013000 Pisum sativum HOM05D006042 ORTHO05D007658 1.2e-19 100.1 70 70.0
Manes.02G066700 Manihot esculenta HOM05D006042 ORTHO05D007658 1.6e-19 99.8 64 75.0
VMungo0464G1707 Vigna mungo HOM05D006042 ORTHO05D007658 1.6e-19 99.8 71 66.2
Hma1.2p1_0550F.1_g177265 Hydrangea macrophylla HOM05D006042 ORTHO05D007658 2.1e-19 99.4 65 73.8
MD17G1074400 Malus domestica HOM05D006042 ORTHO05D007658 2.1e-19 99.4 83 63.9
Medtr6g017260 Medicago truncatula HOM05D006042 ORTHO05D007658 2.1e-19 99.4 70 70.0
GSVIVG01036442001 Vitis vinifera HOM05D006042 ORTHO05D007658 3.6e-19 98.6 67 71.6
Atru.chr8.825 Acer truncatum HOM05D006042 ORTHO05D007658 4.7e-19 98.2 60 78.3
arahy.Tifrunner.gnm1.ann1.TWH6SW Arachis hypogaea HOM05D006042 ORTHO05D007658 8.0e-19 97.4 70 70.0
Potri.017G112700 Populus trichocarpa HOM05D006042 ORTHO05D007658 8.0e-19 97.4 71 66.2
MD09G1084900 Malus domestica HOM05D006042 ORTHO05D007658 1.0e-18 97.1 83 62.7
CSS0008868 Camellia sinensis var. sinensis HOM05D006042 ORTHO05D007658 1.4e-18 96.7 65 72.3
Lalb_Chr06g0174661 Lupinus albus HOM05D006042 ORTHO05D007658 2.3e-18 95.9 71 64.8
THA.LOC104805550 Tarenaya hassleriana HOM05D006042 ORTHO05D007658 3.0e-18 95.5 69 72.5
CANSAT64G1085 Cannabis sativa HOM05D006042 ORTHO05D007658 5.2e-18 94.7 66 68.2
RcHm_v2.0_Chr2g0163121 Rosa chinensis HOM05D006042 ORTHO05D007658 5.2e-18 94.7 78 59.0
TWI53G1226 Tripterygium wilfordii HOM05D006042 ORTHO05D007658 5.2e-18 94.7 70 67.1
AUR62014538 Chenopodium quinoa HOM05D006042 ORTHO05D007658 6.8e-18 94.4 75 62.7
FAN09G0627 Fragaria x ananassa HOM05D006042 ORTHO05D007658 6.8e-18 94.4 78 59.0
Cpa.g.sc179.22 Carica papaya HOM05D006042 ORTHO05D007658 8.8e-18 94.0 71 67.6
Eucgr.F02481 Eucalyptus grandis HOM05D006042 ORTHO05D007658 8.8e-18 94.0 70 67.1
Cfa007944 Carpinus fangiana HOM05D006042 ORTHO05D007658 1.2e-17 93.6 66 71.2
Haze_14130 Corylus avellana HOM05D006042 ORTHO05D007658 1.2e-17 93.6 66 71.2
CDE09G0042 Ceratophyllum demersum HOM05D006042 ORTHO05D007658 1.5e-17 93.2 65 66.2
FvH4_6g45340 Fragaria vesca HOM05D006042 ORTHO05D007658 1.5e-17 93.2 68 64.7
FAN05G0122 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.5e-17 93.2 58 72.4
FAN14G4491 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.5e-17 93.2 68 64.7
DCAR_009854 Daucus carota HOM05D006042 ORTHO05D007658 2.0e-17 92.8 75 62.7
HanXRQChr14g0438681 Helianthus annuus HOM05D006042 ORTHO05D007658 2.0e-17 92.8 76 64.5
Prupe.3G239600 Prunus persica HOM05D006042 ORTHO05D007658 2.6e-17 92.4 80 60.0
Solyc03g034170.4 Solanum lycopersicum HOM05D006042 ORTHO05D007658 2.6e-17 92.4 55 78.2
Sopen03g006950 Solanum pennellii HOM05D006042 ORTHO05D007658 2.6e-17 92.4 55 78.2
PGSC0003DMG400019582 Solanum tuberosum HOM05D006042 ORTHO05D007658 2.6e-17 92.4 55 78.2
Actinidia26288 Actinidia chinensis HOM05D006042 ORTHO05D007658 3.4e-17 92.0 65 69.2
AL7G51880 Arabidopsis lyrata HOM05D006042 ORTHO05D007658 3.4e-17 92.0 70 68.6
Lsat_1_v5_gn_4_153081 Lactuca sativa HOM05D006042 ORTHO05D007658 3.4e-17 92.0 56 80.4
Nitab4.5_0002489g0020 Nicotiana tabacum HOM05D006042 ORTHO05D007658 4.4e-17 91.7 66 71.2
Nitab4.5_0004721g0010 Nicotiana tabacum HOM05D006042 ORTHO05D007658 4.4e-17 91.7 66 71.2
Carub.0007s3720 Capsella rubella HOM05D006042 ORTHO05D007658 7.5e-17 90.9 70 67.1
CARHR214100 Cardamine hirsuta HOM05D006042 ORTHO05D007658 1.3e-16 90.1 65 70.8
BcaB02g07998 Brassica carinata HOM05D006042 ORTHO05D007658 1.7e-16 89.7 61 72.1
BcaC08g44400 Brassica carinata HOM05D006042 ORTHO05D007658 1.7e-16 89.7 61 72.1
A07p19810 Brassica napus HOM05D006042 ORTHO05D007658 1.7e-16 89.7 61 72.1
C06p18330 Brassica napus HOM05D006042 ORTHO05D007658 1.7e-16 89.7 61 72.1
BolC6t37045H Brassica oleracea HOM05D006042 ORTHO05D007658 1.7e-16 89.7 61 72.1
BraA07t29682Z Brassica rapa HOM05D006042 ORTHO05D007658 1.7e-16 89.7 61 72.1
AUR62008965 Chenopodium quinoa HOM05D006042 ORTHO05D007658 1.7e-16 89.7 75 60.0
Sp1g29720 Schrenkiella parvula HOM05D006042 ORTHO05D007658 1.7e-16 89.7 60 71.7
CAN.G995.2 Capsicum annuum HOM05D006042 ORTHO05D007658 2.2e-16 89.4 55 76.4
Cc07_g09000 Coffea canephora HOM05D006042 ORTHO05D007658 2.2e-16 89.4 65 66.2
ECA232G3341 Erigeron canadensis HOM05D006042 ORTHO05D007658 2.2e-16 89.4 65 69.2
Thhalv10027870m.g Eutrema salsugineum HOM05D006042 ORTHO05D007658 2.2e-16 89.4 60 71.7
Oeu030760.1 Olea europaea HOM05D006042 ORTHO05D007658 2.2e-16 89.4 65 69.2
ATR0589G121 Amborella trichopoda HOM05D006042 ORTHO05D007658 3.7e-16 88.6 66 66.7
Aqoxy3G03922 Aquilegia oxysepala HOM05D006042 ORTHO05D007658 3.7e-16 88.6 65 66.2
Os08g0359000 Oryza sativa ssp. japonica HOM05D006042 ORTHO05D007658 3.7e-16 88.6 55 76.4
MBI09_g41181_MAGBIO Magnolia biondii HOM05D006042 ORTHO05D007658 4.8e-16 88.2 81 58.0
Aa31LG9G16960 Aethionema arabicum HOM05D006042 ORTHO05D007658 7.0e-15 84.3 70 61.4
PSO063G0034 Papaver somniferum HOM05D006042 ORTHO05D007658 7.0e-15 84.3 75 57.3
SalBow3G2575 Salvia bowleyana HOM05D006042 ORTHO05D007658 7.0e-15 84.3 55 70.9
SalBow3G3727 Salvia bowleyana HOM05D006042 ORTHO05D007658 7.0e-15 84.3 55 70.9
PSO782G1563 Papaver somniferum HOM05D006042 ORTHO05D007658 9.1e-15 84.0 75 57.3
MSTRG.2747 Avicennia marina HOM05D006042 ORTHO05D007658 1.2e-14 83.6 65 64.6
FAN02G0945 Fragaria x ananassa HOM05D006042 ORTHO05D007658 1.2e-14 83.6 52 75.0
SEGI_07967 Sequoiadendron giganteum HOM05D006042 ORTHO05D007658 1.6e-14 83.2 52 75.0
Ah.16g101960 Amaranthus hybridus HOM05D000095 ORTHO05D000330 3.5e-14 82.0 48 79.2
Zm00001eb042940 Zea mays HOM05D006042 ORTHO05D007658 3.5e-14 82.0 57 73.7
Migut.H00201 Erythranthe guttata HOM05D006042 ORTHO05D007658 4.5e-14 81.6 65 61.5
Hund16127 Selenicereus undatus HOM05D006042 ORTHO05D007658 7.7e-14 80.9 57 70.2
Sc10g0001330 Simmondsia chinensis HOM05D006042 ORTHO05D007658 3.8e-13 78.6 58 62.1
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 5.0e-13 78.2 51 74.5
Pp3c4_3720 Physcomitrium patens HOM05D006042 ORTHO05D007658 6.5e-13 77.8 55 67.3
GSVIVG01026074001 Vitis vinifera HOM05D006042 ORTHO05D007658 4.2e-12 75.1 41 85.4
Sed0018352 Sechium edule HOM05D006042 ORTHO05D007658 5.5e-12 74.7 51 72.5
HPP92_008047 Vanilla planifolia HOM05D006042 ORTHO05D007658 5.5e-12 74.7 59 62.7
vmacro18106 Vaccinium macrocarpon HOM05D006042 ORTHO05D007658 3.6e-11 72.0 51 64.7
Mapoly0019s0052 Marchantia polymorpha HOM05D006042 ORTHO05D007658 4.7e-11 71.6 55 58.2
COL.COLO4_16190 Corchorus olitorius HOM05D002377 ORTHO05D007658 8.0e-11 70.9 51 68.6
AT5G38660 Arabidopsis thaliana HOM05D006042 ORTHO05D007658 5.2e-10 68.2 49 69.4
AagrBONN_evm.TU.Sc2ySwM_340.223 Anthoceros agrestis HOM05D000513 ORTHO05D003825 4.4e-09 65.1 66 51.5
CBR_g44937 Chara braunii HOM05D006042 ORTHO05D007658 2.2e-08 62.8 51 49.0
SMO232G0004 Selaginella moellendorffii HOM05D006042 ORTHO05D007658 1.4e-07 60.1 41 65.9
Cpa.g.sc179.24 Carica papaya HOM05D006042 ORTHO05D007658 7.7e-06 54.3 38 71.1


User provided reference genes

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