Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p054575 Quercus lobata HOM05D000022 ORTHO05D002153 8.4e-44 179.9 85 100.0
QL02p054588 Quercus lobata HOM05D000022 ORTHO05D002153 1.8e-30 135.6 72 87.5
QL02p054639 Quercus lobata HOM05D000022 ORTHO05D002153 2.9e-28 128.3 72 83.3
CiPaw.03G008400 Carya illinoinensis HOM05D000022 ORTHO05D002153 5.1e-17 90.9 70 71.4
CiPaw.03G008100 Carya illinoinensis HOM05D000022 ORTHO05D002153 1.3e-15 86.3 70 68.6
CiPaw.03G008200 Carya illinoinensis HOM05D000022 ORTHO05D002153 1.6e-15 85.9 70 68.6
Haze_14067 Corylus avellana HOM05D000022 ORTHO05D002153 1.3e-12 76.3 75 60.0
GSVIVG01005266001 Vitis vinifera HOM05D000022 ORTHO05D002153 2.9e-12 75.1 66 60.6
Prupe.3G012100 Prunus persica HOM05D000022 ORTHO05D002153 5.0e-12 74.3 71 57.7
RcHm_v2.0_Chr3g0487811 Rosa chinensis HOM05D000022 ORTHO05D002153 5.0e-12 74.3 71 54.9
FvH4_2g29620 Fragaria vesca HOM05D000022 ORTHO05D002153 1.4e-11 72.8 67 59.7
FvH4_1g27613 Fragaria vesca HOM05D000022 ORTHO05D002153 1.9e-11 72.4 67 59.7
FAN15G2428 Fragaria x ananassa HOM05D000022 ORTHO05D002153 1.9e-11 72.4 67 59.7
FAN24G2794 Fragaria x ananassa HOM05D000022 ORTHO05D002153 1.9e-11 72.4 67 59.7
FAN19G1794 Fragaria x ananassa HOM05D000022 ORTHO05D002153 3.2e-11 71.6 67 59.7
FAN23G0825 Fragaria x ananassa HOM05D000022 ORTHO05D002153 5.5e-11 70.9 66 59.1
SalBow5G0958 Salvia bowleyana HOM05D000435 ORTHO05D015690 9.4e-11 70.1 55 63.6
Lalb_Chr15g0085391 Lupinus albus HOM05D000022 ORTHO05D002153 2.1e-10 68.9 64 54.7
COL.COLO4_12134 Corchorus olitorius HOM05D000022 ORTHO05D002153 2.7e-10 68.6 71 46.5
Dinv19060 Davidia involucrata HOM05D000022 ORTHO05D002153 3.6e-10 68.2 51 66.7
Potri.001G276600 Populus trichocarpa HOM05D000022 ORTHO05D002153 3.6e-10 68.2 70 52.9
MD09G1282000 Malus domestica HOM05D007778 ORTHO05D009819 4.6e-10 67.8 72 56.9
Oeu048951.1 Olea europaea HOM05D000022 ORTHO05D002153 4.6e-10 67.8 68 55.9
FAN28G2661 Fragaria x ananassa HOM05D000022 ORTHO05D002153 6.1e-10 67.4 67 58.2
RcHm_v2.0_Chr3g0487871 Rosa chinensis HOM05D000022 ORTHO05D002153 6.1e-10 67.4 71 50.7
Sabra16G0170500 Salix brachista HOM05D000022 ORTHO05D002153 6.1e-10 67.4 70 51.4
Cfa008001 Carpinus fangiana HOM05D000022 ORTHO05D002153 7.9e-10 67.0 70 57.1
Cfa008002 Carpinus fangiana HOM05D000022 ORTHO05D002153 1.4e-09 66.2 77 55.8
Glyma.11G204500 Glycine max HOM05D000022 ORTHO05D002153 1.4e-09 66.2 70 52.9
Glyma.11G204700 Glycine max HOM05D000022 ORTHO05D002153 1.4e-09 66.2 70 52.9
MSTRG.15648 Avicennia marina HOM05D000022 ORTHO05D002153 2.3e-09 65.5 68 51.5
Dinv19057 Davidia involucrata HOM05D000022 ORTHO05D002153 2.3e-09 65.5 50 64.0
TWI56G1417 Tripterygium wilfordii HOM05D000022 ORTHO05D002153 2.3e-09 65.5 73 52.1
COL.COLO4_24823 Corchorus olitorius HOM05D000022 ORTHO05D002153 3.9e-09 64.7 49 65.3
Thecc.01G144200 Theobroma cacao HOM05D000022 ORTHO05D002153 3.9e-09 64.7 64 57.8
Migut.K01106 Erythranthe guttata HOM05D000022 ORTHO05D002153 1.1e-08 63.2 61 55.7
SalBow5G0950 Salvia bowleyana HOM05D000022 ORTHO05D002153 1.5e-08 62.8 71 49.3
Lj6g0023931 Lotus japonicus HOM05D000022 ORTHO05D002153 1.9e-08 62.4 74 47.3
Ca_15112_v3 Cicer arietinum L. HOM05D000022 ORTHO05D002153 5.7e-08 60.8 55 52.7
MBI06_g38228_MAGBIO Magnolia biondii HOM05D000022 ORTHO05D002153 5.7e-08 60.8 72 44.4
Medtr3g064080 Medicago truncatula HOM05D000022 ORTHO05D002153 5.7e-08 60.8 67 49.3
Atru.chr1.2163 Acer truncatum HOM05D000022 ORTHO05D002153 7.4e-08 60.5 55 52.7
CANSAT35G0914 Cannabis sativa HOM05D000022 ORTHO05D002153 7.4e-08 60.5 57 57.9
Cpa.g.c29185 Carica papaya HOM05D000022 ORTHO05D002153 7.4e-08 60.5 51 60.8
arahy.Tifrunner.gnm1.ann1.2IC2UY Arachis hypogaea HOM05D000022 ORTHO05D002153 9.7e-08 60.1 69 44.9
Cc07_g13050 Coffea canephora HOM05D000022 ORTHO05D002153 9.7e-08 60.1 53 56.6
Lj2C515G0 Lonicera japonica HOM05D000022 ORTHO05D002153 9.7e-08 60.1 68 50.0
Nitab4.5_0002214g0050 Nicotiana tabacum HOM05D000022 ORTHO05D002153 9.7e-08 60.1 77 41.6
TPR.G37335 Trifolium pratense HOM05D000022 ORTHO05D002153 9.7e-08 60.1 72 43.1
Nitab4.5_0002465g0050 Nicotiana tabacum HOM05D000022 ORTHO05D002153 1.3e-07 59.7 77 40.3
Phvul.006G084400 Phaseolus vulgaris HOM05D000022 ORTHO05D002153 1.7e-07 59.3 65 52.3
Glyma.11G205600 Glycine max HOM05D000022 ORTHO05D002153 2.2e-07 58.9 60 53.3
Glyma.11G206900 Glycine max HOM05D000022 ORTHO05D002153 2.2e-07 58.9 68 48.5
TWI56G1088 Tripterygium wilfordii HOM05D000022 ORTHO05D002153 2.8e-07 58.5 43 65.1
Manes.07G034100 Manihot esculenta HOM05D000022 ORTHO05D002153 3.7e-07 58.2 74 44.6
Phvul.006G084500 Phaseolus vulgaris HOM05D000022 ORTHO05D002153 3.7e-07 58.2 67 47.8
Thecc.06G058600 Theobroma cacao HOM05D000022 ORTHO05D002153 3.7e-07 58.2 63 49.2
VMungo0540G2115 Vigna mungo HOM05D000022 ORTHO05D002153 3.7e-07 58.2 68 48.5
Ciclev10011290m.g Citrus clementina HOM05D000022 ORTHO05D002153 4.8e-07 57.8 43 65.1
Rhsim10G0181800 Rhododendron simsii HOM05D000022 ORTHO05D002153 4.8e-07 57.8 53 62.3
Potri.017G141300 Populus trichocarpa HOM05D000022 ORTHO05D002153 6.3e-07 57.4 56 51.8
Ca_15113_v3 Cicer arietinum L. HOM05D000022 ORTHO05D002153 1.4e-06 56.2 54 55.6
Peaxi162Scf00078g01414 Petunia axillaris HOM05D000022 ORTHO05D002153 2.4e-06 55.5 76 39.5
VMungo0540G1435 Vigna mungo HOM05D000054 ORTHO05D002153 2.4e-06 55.5 52 53.8
CANSAT35G0282 Cannabis sativa HOM05D000022 ORTHO05D002153 3.1e-06 55.1 62 48.4
Duzib235G0818 Durio zibethinus HOM05D000022 ORTHO05D002153 4.1e-06 54.7 68 42.6
VMungo0540G0287 Vigna mungo HOM05D000022 ORTHO05D002153 5.3e-06 54.3 71 42.3
Rhsim10G0182200 Rhododendron simsii HOM05D000022 ORTHO05D002153 6.9e-06 53.9 50 58.0
DCAR_029806 Daucus carota HOM05D000022 ORTHO05D002153 9.1e-06 53.5 71 43.7
ECA238G1322 Erigeron canadensis HOM05D000022 ORTHO05D002153 9.1e-06 53.5 45 60.0
Lsat_1_v5_gn_2_72681 Lactuca sativa HOM05D000022 ORTHO05D002153 9.1e-06 53.5 69 44.9


User provided reference genes

Program Settings