Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p052500 Quercus lobata HOM05D000107 ORTHO05D000062 9.1e-124 446.8 211 100.0
QL07p012857 Quercus lobata HOM05D000107 ORTHO05D000062 6.2e-56 221.5 132 79.5
QL07p012868 Quercus lobata HOM05D000107 ORTHO05D000062 1.1e-33 147.5 79 84.8
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-16 89.4 119 40.3
CSS0009906 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.3e-16 88.6 75 53.3
Rhsim01G0178900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-15 86.3 119 39.5
CSS0018298 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.6e-14 84.0 75 50.7
CSS0030837 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.6e-14 84.0 75 50.7
CSS0014451 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.0e-14 83.6 75 50.7
Rhsim01G0178800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-13 80.9 77 48.1
CSS0013777 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-13 80.5 69 52.2
CSS0023291 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-13 80.5 69 52.2
CSS0044341 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-13 80.5 69 52.2
CSS0048713 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-13 80.5 69 52.2
CSS0021554 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.9e-13 79.7 69 52.2
CSS0043289 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.9e-13 79.7 69 52.2
Rhsim04G0054900 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.0e-13 79.0 77 45.5
Rhsim11G0004800 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.2e-12 75.1 73 47.9
Sopen10g018620 Solanum pennellii HOM05D000107 ORTHO05D000062 5.2e-10 68.9 140 29.3
TWI15G0534 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.2e-10 68.9 115 33.0
Sopen03g018530 Solanum pennellii HOM05D000004 ORTHO05D009932 2.6e-09 66.6 122 30.3
Sopen08g011050 Solanum pennellii HOM05D000107 ORTHO05D000062 7.5e-09 65.1 119 30.3
Ah.14g079590 Amaranthus hybridus HOM05D000107 ORTHO05D000062 9.8e-09 64.7 101 34.7
Sopen01g017910 Solanum pennellii HOM05D000107 ORTHO05D000062 9.8e-09 64.7 122 29.5
Sopen07g016840 Solanum pennellii HOM05D000107 ORTHO05D000062 9.8e-09 64.7 119 30.3
CSS0006285 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-08 64.3 108 38.0
CSS0013019 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-08 64.3 108 38.0
CSS0020176 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-08 64.3 108 38.0
CSS0020537 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-08 64.3 108 38.0
CSS0022844 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-08 64.3 108 38.0
CSS0034159 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-08 64.3 108 38.0
CSS0036792 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-08 64.3 108 38.0
CSS0038506 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-08 64.3 108 38.0
CSS0043987 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.3e-08 64.3 108 38.0
Sopen05g025940 Solanum pennellii HOM05D000107 ORTHO05D000062 1.3e-08 64.3 122 30.3
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-08 63.9 110 35.5
CSS0028705 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-08 63.9 110 35.5
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-08 63.9 110 35.5
CSS0033153 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-08 63.9 108 37.0
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.7e-08 63.9 110 35.5
Sopen02g004720 Solanum pennellii HOM05D000107 ORTHO05D000062 2.2e-08 63.5 119 29.4
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.8e-08 63.2 114 38.6
Sopen01g009930 Solanum pennellii HOM05D000107 ORTHO05D000062 2.8e-08 63.2 119 29.4
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.7e-08 62.8 110 34.5
Sopen06g015790 Solanum pennellii HOM05D000004 ORTHO05D000062 4.8e-08 62.4 122 30.3
CSS0035542 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.3e-08 62.0 107 35.5
QL04p092704 Quercus lobata HOM05D000107 ORTHO05D000062 6.3e-08 62.0 84 38.1
Sopen04g011400 Solanum pennellii HOM05D000107 ORTHO05D000062 6.3e-08 62.0 122 29.5
TAR193G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 8.3e-08 61.6 116 26.7
Sopen12g016210 Solanum pennellii HOM05D000107 ORTHO05D009932 1.4e-07 60.8 122 29.5
TAR165G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.4e-07 60.8 116 27.6
PSO541G4916 Papaver somniferum HOM05D000107 ORTHO05D000062 1.8e-07 60.5 118 33.9
QL08p034606 Quercus lobata HOM05D039047 ORTHO05D000062 1.8e-07 60.5 56 50.0
Rhsim01G0164300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-07 60.1 114 37.7
Rhsim04G0033300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-07 60.1 114 37.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-07 60.1 78 39.7
Rhsim09G0047500 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-07 60.1 78 39.7
RhsimUnG0181200 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-07 60.1 78 39.7
TWI79G0232 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.4e-07 60.1 109 33.9
Lj1g0023380 Lotus japonicus HOM05D021492 ORTHO05D022867 3.1e-07 59.7 103 34.0
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-07 59.7 114 36.0
Rhsim09G0134500 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-07 59.7 114 36.0
Sopen09g019560 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-07 59.7 124 29.8
TAR507G0003 Trochodendron aralioides HOM05D000107 ORTHO05D003213 3.1e-07 59.7 97 30.9
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-07 58.9 114 37.7
Rhsim01G0188000 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.4e-07 58.9 104 35.6
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 7.0e-07 58.5 116 34.5
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 9.1e-07 58.2 106 30.2
Ah.13g068990 Amaranthus hybridus HOM05D000107 ORTHO05D003213 1.2e-06 57.8 108 30.6
PSO455G0051 Papaver somniferum HOM05D000107 ORTHO05D000062 1.2e-06 57.8 98 38.8
VMungo0331G0361 Vigna mungo HOM05D000107 ORTHO05D003213 1.2e-06 57.8 94 29.8
Ah.08g223240 Amaranthus hybridus HOM05D000107 ORTHO05D000062 1.6e-06 57.4 101 32.7
Lj1g0007648 Lotus japonicus HOM05D000107 ORTHO05D003213 1.6e-06 57.4 142 28.2
Os07g0516500 Oryza sativa ssp. japonica HOM05D032447 ORTHO05D003213 1.6e-06 57.4 94 35.1
MBI17_g17142_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.0e-06 57.0 112 32.1
QL12p013571 Quercus lobata HOM05D000107 ORTHO05D000062 2.0e-06 57.0 114 33.3
Atru.chr11.301 Acer truncatum HOM05D000107 ORTHO05D000062 2.7e-06 56.6 124 32.3
Rhsim11G0143900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-06 56.2 104 34.6
Ah.01g007820 Amaranthus hybridus HOM05D000107 ORTHO05D003213 4.5e-06 55.8 137 31.4
PSO170G2967 Papaver somniferum HOM05D000107 ORTHO05D000062 4.5e-06 55.8 98 37.8
PSO170G3239 Papaver somniferum HOM05D000107 ORTHO05D000062 4.5e-06 55.8 98 37.8
PSO409G0030 Papaver somniferum HOM05D000107 ORTHO05D000062 4.5e-06 55.8 98 37.8
PSO782G4174 Papaver somniferum HOM05D000107 ORTHO05D000062 4.5e-06 55.8 98 37.8
PSO170G4271 Papaver somniferum HOM05D000107 ORTHO05D000062 5.9e-06 55.5 97 37.1
PSO541G1299 Papaver somniferum HOM05D000107 ORTHO05D000062 5.9e-06 55.5 98 33.7
ECA232G4762 Erigeron canadensis HOM05D000107 ORTHO05D000062 7.7e-06 55.1 110 34.5
TAR110G0001 Trochodendron aralioides HOM05D000107 ORTHO05D003213 7.7e-06 55.1 127 24.4
TAR544G0001 Trochodendron aralioides HOM05D000107 ORTHO05D003213 7.7e-06 55.1 111 26.1


User provided reference genes

Program Settings