Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p051676 Quercus lobata HOM05D003845 ORTHO05D004161 3.5e-65 251.5 130 100.0
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 3.5e-57 224.9 125 92.8
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 4.5e-57 224.6 125 92.0
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 6.6e-56 220.7 125 90.4
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 6.6e-56 220.7 125 90.4
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 8.6e-56 220.3 125 90.4
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 1.1e-55 219.9 125 89.6
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 1.1e-55 219.9 126 88.1
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 1.9e-55 219.2 125 91.2
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 1.9e-55 219.2 125 89.6
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 2.5e-55 218.8 125 90.4
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 4.2e-55 218.0 125 90.4
CSS0018407 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 4.2e-55 218.0 125 90.4
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 1.2e-54 216.5 125 88.8
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 1.2e-54 216.5 125 88.8
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 1.6e-54 216.1 126 87.3
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 1.6e-54 216.1 125 88.8
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 1.6e-54 216.1 125 88.0
Ciclev10011943m.g Citrus clementina HOM05D003845 ORTHO05D004161 2.8e-54 215.3 125 88.8
Cpa.g.sc179.9 Carica papaya HOM05D003845 ORTHO05D004161 6.1e-54 214.2 124 88.7
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 6.1e-54 214.2 125 87.2
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 8.0e-54 213.8 125 87.2
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 8.0e-54 213.8 125 88.8
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 2.3e-53 212.2 123 86.2
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 6.8e-53 210.7 125 86.4
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 6.8e-53 210.7 123 86.2
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 8.9e-53 210.3 125 84.8
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.2e-52 209.9 125 86.4
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.2e-52 209.9 125 86.4
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 1.5e-52 209.5 124 87.9
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 1.5e-52 209.5 126 84.1
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 1.5e-52 209.5 126 84.9
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 2.6e-52 208.8 125 85.6
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 2.6e-52 208.8 121 86.8
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 2.6e-52 208.8 121 86.8
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 3.4e-52 208.4 126 85.7
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 3.4e-52 208.4 125 84.0
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 3.4e-52 208.4 125 85.6
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 5.7e-52 207.6 128 82.8
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 7.5e-52 207.2 123 84.6
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 7.5e-52 207.2 125 85.6
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 2.8e-51 205.3 125 83.2
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 2.8e-51 205.3 121 86.0
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 2.8e-51 205.3 126 84.1
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 3.7e-51 204.9 126 83.3
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 8.3e-51 203.8 125 84.8
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 1.8e-50 202.6 125 81.6
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 2.4e-50 202.2 125 82.4
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 7.0e-50 200.7 133 78.2
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 7.0e-50 200.7 125 82.4
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 9.2e-50 200.3 125 80.8
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 1.2e-49 199.9 127 82.7
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.2e-49 199.9 127 82.7
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.2e-49 199.9 127 82.7
CAN.G625.3 Capsicum annuum HOM05D003845 ORTHO05D004161 1.6e-49 199.5 125 83.2
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 2.0e-49 199.1 125 83.2
Actinidia15875 Actinidia chinensis HOM05D003845 ORTHO05D004161 2.7e-49 198.7 119 85.7
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 2.7e-49 198.7 126 81.7
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 2.7e-49 198.7 125 82.4
Lj2C445T15 Lonicera japonica HOM05D003845 ORTHO05D004161 3.5e-49 198.4 126 82.5
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 5.9e-49 197.6 125 82.4
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 1.3e-48 196.4 128 77.3
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 1.7e-48 196.1 128 79.7
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 3.9e-48 194.9 125 80.0
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 3.9e-48 194.9 125 80.0
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 5.0e-48 194.5 125 80.8
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 5.0e-48 194.5 125 80.8
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 5.0e-48 194.5 125 80.8
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 5.0e-48 194.5 125 80.8
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 5.0e-48 194.5 125 81.6
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 6.6e-48 194.1 125 80.0
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 7.3e-47 190.7 128 77.3
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 9.5e-47 190.3 126 77.0
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 2.1e-46 189.1 123 78.0
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 8.0e-46 187.2 117 80.3
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 8.0e-46 187.2 117 80.3
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.8e-45 186.0 127 75.6
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 2.3e-45 185.7 125 76.8
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 8.9e-45 183.7 127 75.6
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 4.4e-44 181.4 115 77.4
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 1.3e-43 179.9 115 79.1
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 2.2e-43 179.1 127 74.0
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 8.3e-43 177.2 123 70.7
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 1.1e-42 176.8 125 72.0
ATR0564G289 Amborella trichopoda HOM05D003845 ORTHO05D004161 1.4e-42 176.4 115 75.7
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 5.4e-42 174.5 126 71.4
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 5.4e-42 174.5 126 71.4
SEGI_40473 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 1.6e-38 162.9 124 65.3
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 1.1e-37 160.2 116 71.6
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 1.9e-31 139.4 117 63.2
ClCG11G005430 Citrullus lanatus HOM05D003845 ORTHO05D004161 3.7e-27 125.2 73 82.2
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 8.3e-27 124.0 115 58.3
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 2.4e-26 122.5 117 59.0
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 3.5e-25 118.6 70 85.7
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 5.6e-23 111.3 92 62.0
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 1.5e-20 103.2 113 50.4
Actinidia17348 Actinidia chinensis HOM05D003226 ORTHO05D015784 1.6e-17 93.2 56 80.4
Actinidia17345 Actinidia chinensis HOM05D003845 ORTHO05D004161 2.7e-17 92.4 54 83.3
COL.COLO4_16180 Corchorus olitorius HOM05D003845 ORTHO05D004161 1.0e-16 90.5 53 83.0
arahy.Tifrunner.gnm1.ann1.395ZIT Arachis hypogaea HOM05D003845 ORTHO05D004161 3.3e-15 85.5 56 73.2
arahy.Tifrunner.gnm1.ann1.57NG5G Arachis hypogaea HOM05D003845 ORTHO05D004161 2.8e-14 82.4 53 75.5
ClCG11G005420 Citrullus lanatus HOM05D003845 ORTHO05D004161 8.4e-11 70.9 50 76.0
MBI02_g02968_MAGBIO Magnolia biondii HOM05D003845 ORTHO05D004161 2.7e-09 65.9 45 73.3
Cre16.g684100 Chlamydomonas reinhardtii HOM05D003845 ORTHO05D004161 7.8e-09 64.3 120 34.2
arahy.Tifrunner.gnm1.ann1.MNN8Y6 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.5e-07 60.1 63 55.6
Actinidia09188 Actinidia chinensis HOM05D003845 ORTHO05D004161 3.6e-06 55.5 33 84.8
Rhsim09G0080700 Rhododendron simsii HOM05D003845 ORTHO05D004161 3.6e-06 55.5 36 80.6


User provided reference genes

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