Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 3.9e-232 807.7 404 100.0
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 1.9e-154 549.7 406 73.4
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 1.8e-152 543.1 416 70.7
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 4.6e-148 528.5 404 69.6
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 1.1e-146 523.9 404 70.0
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 1.9e-146 523.1 404 66.8
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.9e-146 523.1 404 66.8
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 7.3e-146 521.2 406 67.5
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 1.6e-145 520.0 406 70.9
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.6e-145 518.8 404 66.6
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 4.0e-144 515.4 405 68.4
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 8.9e-144 514.2 405 68.1
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 5.8e-143 511.5 407 68.3
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 5.8e-143 511.5 407 68.3
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 7.5e-143 511.1 406 67.5
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 1.3e-142 510.4 404 67.8
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 6.4e-142 508.1 404 67.6
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 9.2e-141 504.2 405 68.6
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 9.2e-141 504.2 407 67.1
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 3.5e-140 502.3 404 68.1
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 1.0e-139 500.7 406 65.8
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.7e-139 500.0 404 67.8
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 1.7e-139 500.0 404 67.8
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 1.7e-139 500.0 406 65.8
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 2.3e-139 499.6 405 66.4
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 2.3e-139 499.6 405 66.4
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 3.9e-139 498.8 406 66.0
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 3.9e-139 498.8 386 71.8
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 8.6e-139 497.7 404 64.6
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 8.6e-139 497.7 404 66.1
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 9.5e-138 494.2 404 64.1
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 1.6e-137 493.4 407 66.8
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 2.8e-137 492.7 403 65.5
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.4e-136 490.3 404 64.4
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 3.1e-136 489.2 394 66.5
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 5.2e-136 488.4 408 65.0
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 8.9e-136 487.6 401 64.6
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 8.9e-136 487.6 401 64.6
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 1.5e-135 486.9 394 66.2
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 2.6e-135 486.1 403 64.8
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 4.4e-135 485.3 406 64.8
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 7.6e-135 484.6 403 64.5
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 1.3e-134 483.8 401 64.1
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 1.3e-134 483.8 408 64.7
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 1.3e-134 483.8 404 64.1
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 1.7e-134 483.4 401 64.1
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 1.7e-134 483.4 402 63.4
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 4.9e-134 481.9 404 62.4
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 6.4e-134 481.5 405 65.4
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 2.4e-133 479.6 401 63.8
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 3.2e-133 479.2 401 63.8
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 4.1e-133 478.8 406 64.3
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 4.1e-133 478.8 407 63.6
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 7.1e-133 478.0 406 63.8
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 2.1e-132 476.5 406 62.8
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 2.1e-132 476.5 405 63.2
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 6.0e-132 474.9 406 62.8
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 1.0e-131 474.2 405 64.4
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 2.3e-131 473.0 407 63.6
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 5.2e-128 461.8 409 62.6
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 3.8e-126 455.7 403 61.8
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.2e-125 452.6 406 60.6
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 4.2e-125 452.2 372 64.2
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 1.0e-123 447.6 404 59.2
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 8.7e-123 444.5 388 61.3
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 7.3e-122 441.4 455 54.7
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 8.1e-121 438.0 399 58.6
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 1.5e-119 433.7 424 56.8
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 1.3e-118 430.6 396 58.3
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 2.4e-117 426.4 375 61.9
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 2.5e-114 416.4 395 57.7
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 2.1e-113 413.3 386 57.8
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 5.3e-112 408.7 369 60.4
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 9.0e-112 407.9 371 60.1
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 2.0e-111 406.8 393 54.5
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 2.9e-110 402.9 386 57.5
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 1.9e-109 400.2 405 53.8
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 2.3e-107 393.3 400 51.0
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 1.5e-106 390.6 415 54.5
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 9.6e-106 387.9 348 58.0
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 1.6e-105 387.1 363 59.2
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 3.8e-102 375.9 410 53.7
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 7.1e-101 371.7 419 54.9
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 1.0e-99 367.9 393 53.2
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 5.1e-99 365.5 298 68.5
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 9.7e-98 361.3 422 48.3
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 7.2e-85 318.5 334 58.1
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 4.4e-82 309.3 308 57.8
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 5.7e-74 282.3 192 77.1
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 2.2e-73 280.4 387 42.4
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 2.8e-73 280.0 174 80.5
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 9.1e-72 275.0 174 80.5
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 5.2e-67 259.2 174 78.7
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 8.8e-67 258.5 292 52.1
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 5.7e-66 255.8 179 72.1
RcHm_v2.0_Chr1g0351931 Rosa chinensis HOM05D006225 ORTHO05D007676 1.8e-64 250.8 141 81.6
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 7.7e-63 245.4 369 36.6
Actinidia15885 Actinidia chinensis HOM05D006225 ORTHO05D007676 1.9e-61 240.7 142 80.3
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 1.6e-60 237.7 158 71.5
Cc07_g08800 Coffea canephora HOM05D006225 ORTHO05D007676 3.6e-60 236.5 146 77.4
FAN10G1204 Fragaria x ananassa HOM05D006225 ORTHO05D007676 2.7e-55 220.3 145 71.7
Solyc02g086070.2 Solanum lycopersicum HOM05D006225 ORTHO05D007676 2.3e-54 217.2 141 72.3
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 8.6e-54 215.3 171 67.3
Hma1.2p1_0136F.1_g062270 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 1.5e-53 214.5 123 78.0
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 4.2e-53 213.0 357 35.0
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 1.0e-51 208.4 154 74.0
Peaxi162Scf00394g00622 Petunia axillaris HOM05D006225 ORTHO05D007676 6.3e-49 199.1 108 83.3
MD07G1125200 Malus domestica HOM05D006225 ORTHO05D007676 6.1e-44 182.6 111 75.7
arahy.Tifrunner.gnm1.ann1.PRIQ1K Arachis hypogaea HOM05D006225 ORTHO05D007676 4.0e-43 179.9 128 69.5
arahy.Tifrunner.gnm1.ann1.8IQW6A Arachis hypogaea HOM05D006225 ORTHO05D007676 4.9e-41 172.9 111 69.4
arahy.Tifrunner.gnm1.ann1.RE0KC5 Arachis hypogaea HOM05D006225 ORTHO05D007676 2.3e-38 164.1 139 61.2
arahy.Tifrunner.gnm1.ann1.QBFC9G Arachis hypogaea HOM05D006225 ORTHO05D007676 3.3e-37 160.2 126 62.7
SHI22412 Sapria himalayana HOM05D006225 ORTHO05D007676 3.3e-37 160.2 94 79.8
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 9.5e-37 158.7 183 53.0
CDE02G0503 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 1.2e-34 151.8 92 70.7
arahy.Tifrunner.gnm1.ann1.QHM34M Arachis hypogaea HOM05D006225 ORTHO05D007676 1.4e-32 144.8 133 57.1
arahy.Tifrunner.gnm1.ann1.FD2CEU Arachis hypogaea HOM05D006225 ORTHO05D007676 1.9e-29 134.4 104 66.3
arahy.Tifrunner.gnm1.ann1.A87HRQ Arachis hypogaea HOM05D006225 ORTHO05D007676 7.3e-29 132.5 102 64.7
arahy.Tifrunner.gnm1.ann1.5T0UVN Arachis hypogaea HOM05D006225 ORTHO05D007676 1.8e-27 127.9 75 77.3
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 4.4e-26 123.2 81 76.5
CBR_g65298 Chara braunii HOM05D006225 ORTHO05D007676 1.4e-24 118.2 122 43.4
HanXRQChr13g0396101 Helianthus annuus HOM05D006225 ORTHO05D007676 1.4e-24 118.2 66 83.3
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 2.4e-24 117.5 78 74.4
Mapoly0085s0089 Marchantia polymorpha HOM05D006555 ORTHO05D008376 9.2e-24 115.5 363 24.0
Hma1.2p1_0239F.1_g099920 Hydrangea macrophylla HOM05D006225 ORTHO05D007676 2.7e-23 114.0 64 79.7
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 7.8e-23 112.5 115 55.7
arahy.Tifrunner.gnm1.ann1.GQQ1MZ Arachis hypogaea HOM05D006225 ORTHO05D007676 2.1e-20 104.4 75 69.3
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 4.2e-16 90.1 175 34.9
BcaC04g24063 Brassica carinata HOM05D006225 ORTHO05D007676 1.3e-09 68.6 57 57.9
SEGI_26593 Sequoiadendron giganteum HOM05D006555 ORTHO05D008376 1.2e-07 62.0 151 29.1
Duzib187G0608 Durio zibethinus HOM05D006555 ORTHO05D008376 4.6e-07 60.1 360 21.9
HanXRQChr15g0474321 Helianthus annuus HOM05D006555 ORTHO05D008376 1.7e-06 58.2 159 27.7
EL10Ac3g05120 Beta vulgaris HOM05D006555 ORTHO05D008376 3.0e-06 57.4 379 23.2
Lsat_1_v5_gn_0_24261 Lactuca sativa HOM05D006555 ORTHO05D008376 3.0e-06 57.4 146 25.3


User provided reference genes

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