Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 1.8e-65 252.3 114 100.0
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 3.4e-16 88.6 49 73.5
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 8.4e-15 84.0 52 67.3
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 5.4e-14 81.3 66 54.5
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 1.0e-12 77.0 50 66.0
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 1.1e-11 73.6 51 58.8
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.9e-11 72.8 51 60.8
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 3.3e-11 72.0 70 52.9
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 7.4e-11 70.9 50 64.0
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 7.4e-11 70.9 51 56.9
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 7.4e-11 70.9 67 49.3
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 9.6e-11 70.5 53 58.5
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 9.6e-11 70.5 53 58.5
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 9.6e-11 70.5 53 58.5
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 9.6e-11 70.5 67 49.3
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 1.3e-10 70.1 49 59.2
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 1.6e-10 69.7 53 62.3
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.1e-10 69.3 67 46.3
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 2.8e-10 68.9 51 58.8
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 4.8e-10 68.2 52 57.7
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 1.1e-09 67.0 53 58.5
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 1.1e-09 67.0 51 52.9
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 1.1e-09 67.0 51 58.8
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 1.1e-09 67.0 66 47.0
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 2.4e-09 65.9 65 47.7
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 2.4e-09 65.9 51 58.8
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 3.1e-09 65.5 67 46.3
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 4.0e-09 65.1 53 58.5
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 4.0e-09 65.1 52 53.8
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 4.0e-09 65.1 52 53.8
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 4.0e-09 65.1 68 47.1
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 5.3e-09 64.7 50 54.0
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 6.9e-09 64.3 69 43.5
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.2e-08 63.5 66 45.5
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.2e-08 63.5 66 45.5
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 2.6e-08 62.4 51 52.9
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 3.4e-08 62.0 52 55.8
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 9.9e-08 60.5 51 51.0
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 9.9e-08 60.5 41 61.0
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.3e-07 60.1 67 40.3
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 1.3e-07 60.1 44 56.8
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 2.9e-07 58.9 51 51.0
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.9e-07 58.9 61 45.9
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 3.8e-07 58.5 61 49.2
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 3.8e-07 58.5 61 49.2
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 6.4e-07 57.8 57 47.4
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 8.4e-07 57.4 48 56.2
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 8.4e-07 57.4 65 43.1
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.1e-06 57.0 66 43.9
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 1.1e-06 57.0 53 52.8
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 1.1e-06 57.0 53 52.8
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.1e-06 57.0 51 47.1
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.4e-06 56.6 48 58.3
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 1.9e-06 56.2 51 54.9
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 4.2e-06 55.1 49 53.1
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 7.1e-06 54.3 66 42.4
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 7.1e-06 54.3 53 47.2


User provided reference genes

Program Settings