Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 8.3e-230 800.0 411 100.0
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 8.2e-161 570.9 416 72.6
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 3.5e-156 555.4 420 69.0
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 3.1e-152 542.3 413 69.7
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 2.0e-151 539.7 416 68.8
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 2.5e-141 506.1 413 66.8
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 1.5e-138 496.9 417 61.4
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 1.1e-136 490.7 313 82.4
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 5.3e-136 488.4 430 61.9
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 4.2e-133 478.8 413 62.7
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 7.2e-133 478.0 420 61.9
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 8.0e-132 474.6 414 64.5
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 8.8e-131 471.1 420 63.8
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 1.5e-130 470.3 431 60.8
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 9.7e-130 467.6 420 63.1
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 5.3e-128 461.8 413 63.7
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 1.3e-126 457.2 417 60.9
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 1.1e-125 454.1 324 75.0
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 1.1e-125 454.1 411 59.6
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 3.6e-124 449.1 412 60.0
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 2.3e-123 446.4 414 60.6
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 2.0e-122 443.4 313 72.8
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 1.1e-120 437.6 308 75.0
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 5.9e-119 431.8 528 52.5
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 2.9e-118 429.5 432 58.1
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 6.5e-118 428.3 414 58.5
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 1.1e-117 427.6 422 55.9
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 2.5e-117 426.4 377 63.4
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 5.5e-117 425.2 434 56.5
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 1.2e-116 424.1 414 58.2
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 6.1e-116 421.8 309 72.5
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 1.8e-115 420.2 434 55.8
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 5.2e-115 418.7 405 59.3
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 6.8e-115 418.3 378 63.8
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 8.8e-115 417.9 377 62.6
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 2.8e-113 412.9 413 56.7
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 3.7e-113 412.5 433 57.0
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 3.1e-112 409.5 424 55.2
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 1.7e-110 403.7 536 47.9
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 1.5e-109 400.6 410 57.8
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 2.5e-109 399.8 460 56.1
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 7.2e-109 398.3 417 57.3
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 1.6e-108 397.1 405 55.8
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 4.7e-108 395.6 317 69.1
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 1.5e-106 390.6 432 57.2
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 2.9e-105 386.3 405 55.1
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 2.9e-105 386.3 402 54.2
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 3.7e-105 386.0 380 57.4
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 8.3e-105 384.8 389 54.8
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 1.8e-104 383.6 416 56.7
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 3.5e-103 379.4 315 64.1
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 5.9e-103 378.6 407 53.8
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 5.9e-103 378.6 313 66.8
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 7.8e-103 378.3 316 65.8
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 8.6e-102 374.8 410 53.4
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 1.1e-101 374.4 306 64.7
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 4.3e-101 372.5 313 62.0
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 8.0e-100 368.2 412 53.2
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 8.9e-99 364.8 424 52.4
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 3.4e-98 362.8 405 53.8
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 1.9e-96 357.1 404 54.7
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 1.9e-96 357.1 404 54.7
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 9.2e-96 354.8 463 48.2
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 2.0e-95 353.6 312 60.6
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 2.7e-95 353.2 399 52.4
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 1.3e-94 350.9 241 80.5
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 1.7e-94 350.5 417 49.6
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 3.9e-94 349.4 495 44.8
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 4.7e-92 342.4 421 51.1
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 4.7e-92 342.4 414 53.6
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 5.2e-91 339.0 404 50.5
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 1.4e-88 330.9 337 53.4
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 1.2e-87 327.8 312 57.7
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 3.5e-87 326.2 339 57.5
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 3.9e-86 322.8 427 50.8
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 1.5e-85 320.9 333 57.4
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 5.2e-83 312.4 304 59.9
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 6.8e-83 312.0 437 46.2
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 3.7e-81 306.2 285 56.8
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 1.4e-75 287.7 431 46.4
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 2.6e-74 283.5 413 45.8
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 5.8e-74 282.3 416 46.2
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.4e-72 277.7 468 42.1
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 2.4e-72 276.9 489 41.3
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 7.1e-72 275.4 421 45.8
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 1.6e-71 274.2 505 41.0
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 3.9e-70 269.6 305 51.1
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 4.3e-69 266.2 426 43.2
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 2.8e-68 263.5 404 45.3
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 1.2e-63 248.1 500 38.0
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 7.9e-63 245.4 434 40.6
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 2.3e-62 243.8 426 43.0
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 5.1e-62 242.7 197 58.9
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 7.4e-61 238.8 434 41.9
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 2.4e-59 233.8 432 39.4
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 4.0e-59 233.0 435 40.5
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 9.9e-58 228.4 447 39.4
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 1.3e-57 228.0 222 58.6
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 4.2e-56 223.0 404 44.6
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 2.3e-54 217.2 335 48.4
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 7.4e-53 212.2 237 54.9
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 8.1e-52 208.8 472 37.1
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 5.8e-50 202.6 224 50.9
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 8.4e-49 198.7 432 40.5
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 1.1e-48 198.4 424 38.0
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.9e-48 197.6 295 48.5
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 3.3e-45 186.8 418 38.8
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 8.2e-44 182.2 420 37.9
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 6.9e-43 179.1 401 38.7
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.4e-40 171.4 395 37.2
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 9.3e-40 168.7 420 34.8
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 2.1e-39 167.5 247 46.6
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 3.3e-37 160.2 304 43.1
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 4.8e-36 156.4 395 38.2
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 6.3e-36 156.0 433 37.4
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 9.0e-35 152.1 412 36.9
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 9.0e-35 152.1 412 36.9
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 2.9e-33 147.1 331 36.3
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 2.5e-29 134.0 351 35.0
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 1.5e-26 124.8 413 35.1
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 3.8e-25 120.2 310 35.8
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 1.2e-23 115.2 327 33.6
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 2.1e-23 114.4 329 35.6
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 7.9e-23 112.5 290 35.5
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 5.9e-18 96.3 283 33.9
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 3.2e-16 90.5 353 32.6
MD15G1181500 Malus domestica HOM05D005514 ORTHO05D006563 9.4e-16 89.0 64 71.9
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 5.2e-14 83.2 171 38.0
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 4.8e-12 76.6 238 40.8
COL.COLO4_34822 Corchorus olitorius HOM05D005514 ORTHO05D006563 6.3e-12 76.3 74 58.1
Oeu064594.1 Olea europaea HOM05D005514 ORTHO05D006563 8.2e-12 75.9 67 67.2
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 8.2e-12 75.9 139 41.0
Lsat_1_v5_gn_5_102961 Lactuca sativa HOM05D005514 ORTHO05D006563 3.1e-11 73.9 63 63.5
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 5.9e-10 69.7 37 70.3
Cc06_g09940 Coffea canephora HOM05D005514 ORTHO05D006563 1.5e-08 65.1 76 56.6
Lalb_Chr14g0371631 Lupinus albus HOM05D005514 ORTHO05D006563 2.7e-07 60.8 70 57.1


User provided reference genes

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