Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p044325 Quercus lobata HOM05D003689 ORTHO05D003950 5.8e-124 449.1 660 100.0
QL02p045402 Quercus lobata HOM05D003689 ORTHO05D003950 2.9e-75 287.3 588 98.6
Haze_25759 Corylus avellana HOM05D003689 ORTHO05D003950 4.6e-57 226.9 632 76.9
Cfa003251 Carpinus fangiana HOM05D003689 ORTHO05D003950 1.3e-54 218.8 143 76.2
GSVIVG01015378001 Vitis vinifera HOM05D003689 ORTHO05D003950 1.4e-32 145.6 106 71.7
CSS0016195 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 2.0e-31 141.7 98 69.4
Dinv41614 Davidia involucrata HOM05D003689 ORTHO05D003950 4.1e-29 134.0 119 56.3
Sabra18G0068800 Salix brachista HOM05D003689 ORTHO05D003950 4.1e-29 134.0 115 60.0
Hma1.2p1_1151F.1_g262016 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 5.3e-29 133.7 112 58.9
Thecc.09G108800 Theobroma cacao HOM05D003689 ORTHO05D003950 1.0e-27 129.4 110 60.9
Potri.018G081700 Populus trichocarpa HOM05D003689 ORTHO05D003950 1.3e-27 129.0 105 63.8
Prupe.7G232600 Prunus persica HOM05D003689 ORTHO05D003950 1.7e-27 128.6 135 51.1
Hma1.2p1_3266F.1_g334670 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 6.5e-27 126.7 95 64.2
COL.COLO4_34846 Corchorus olitorius HOM05D001279 ORTHO05D001636 1.9e-26 125.2 107 58.9
RcHm_v2.0_Chr2g0090251 Rosa chinensis HOM05D003689 ORTHO05D003950 3.2e-26 124.4 140 47.9
FAN23G2385 Fragaria x ananassa HOM05D003689 ORTHO05D003950 7.2e-26 123.2 139 46.0
Ciclev10007776m.g Citrus clementina HOM05D003689 ORTHO05D003950 9.4e-26 122.9 101 67.3
Lj7A652T76 Lonicera japonica HOM05D003689 ORTHO05D003950 1.2e-25 122.5 88 64.8
FvH4_1g04540 Fragaria vesca HOM05D003689 ORTHO05D003950 1.6e-25 122.1 139 45.3
FAN26G3272 Fragaria x ananassa HOM05D003689 ORTHO05D003950 2.1e-25 121.7 139 46.0
Cc06_g09790 Coffea canephora HOM05D003689 ORTHO05D003950 3.6e-25 120.9 98 62.2
Gohir.A06G063300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 3.6e-25 120.9 110 57.3
FAN28G1273 Fragaria x ananassa HOM05D003689 ORTHO05D003950 8.0e-25 119.8 139 43.9
Gohir.D06G062000 Gossypium hirsutum HOM05D003689 ORTHO05D003950 2.3e-24 118.2 110 56.4
Gorai.010G072200 Gossypium raimondii HOM05D003689 ORTHO05D003950 2.3e-24 118.2 110 56.4
MD15G1183500 Malus domestica HOM05D003689 ORTHO05D003950 3.0e-24 117.9 144 50.0
ClCG06G008630 Citrullus lanatus HOM05D003689 ORTHO05D003950 5.2e-24 117.1 92 64.1
Sed0017853 Sechium edule HOM05D003689 ORTHO05D003950 5.2e-24 117.1 97 62.9
MELO3C025352.2 Cucumis melo HOM05D003689 ORTHO05D003950 8.8e-24 116.3 92 63.0
CsaV3_1G025520 Cucumis sativus L. HOM05D003689 ORTHO05D003950 8.8e-24 116.3 92 63.0
Eucgr.C03818 Eucalyptus grandis HOM05D003689 ORTHO05D003950 8.8e-24 116.3 110 54.5
Rhsim01G0097100 Rhododendron simsii HOM05D003689 ORTHO05D003950 8.8e-24 116.3 97 58.8
Manes.03G021600 Manihot esculenta HOM05D003689 ORTHO05D003950 1.2e-23 115.9 149 46.3
Duzib150G1680 Durio zibethinus HOM05D003689 ORTHO05D003950 2.0e-23 115.2 78 69.2
Lalb_Chr05g0222931 Lupinus albus HOM05D003689 ORTHO05D003950 4.4e-23 114.0 93 63.4
Actinidia32678 Actinidia chinensis HOM05D003689 ORTHO05D003950 9.8e-23 112.8 110 51.8
Peaxi162Scf00231g00023 Petunia axillaris HOM05D003689 ORTHO05D003950 9.8e-23 112.8 94 60.6
Lalb_Chr16g0388171 Lupinus albus HOM05D003689 ORTHO05D003950 1.3e-22 112.5 86 64.0
MSTRG.6008 Avicennia marina HOM05D003689 ORTHO05D003950 2.2e-22 111.7 94 58.5
CAN.G238.2 Capsicum annuum HOM05D003689 ORTHO05D003950 2.2e-22 111.7 105 55.2
FAN20G2410 Fragaria x ananassa HOM05D003689 ORTHO05D003950 2.2e-22 111.7 94 57.4
Glyma.08G038200 Glycine max HOM05D003689 ORTHO05D003950 3.7e-22 110.9 97 57.7
MD08G1118600 Malus domestica HOM05D003689 ORTHO05D003950 3.7e-22 110.9 95 56.8
CANSAT56G1603 Cannabis sativa HOM05D003689 ORTHO05D003950 1.4e-21 109.0 143 42.0
TAR624G0802 Trochodendron aralioides HOM05D003689 ORTHO05D003950 1.4e-21 109.0 106 52.8
Actinidia32677 Actinidia chinensis HOM05D001279 ORTHO05D003950 1.8e-21 108.6 105 50.5
FAN23G2461 Fragaria x ananassa HOM05D003689 ORTHO05D003950 1.8e-21 108.6 94 61.7
CANSAT56G4471 Cannabis sativa HOM05D003689 ORTHO05D003950 4.1e-21 107.5 143 42.0
Nitab4.5_0000114g0090 Nicotiana tabacum HOM05D003689 ORTHO05D003950 5.4e-21 107.1 97 55.7
QL12p026389 Quercus lobata HOM05D003689 ORTHO05D003950 5.4e-21 107.1 99 54.5
Solyc07g032380.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 9.1e-21 106.3 77 67.5
PGSC0003DMG400024327 Solanum tuberosum HOM05D003689 ORTHO05D003950 9.1e-21 106.3 114 52.6
RcHm_v2.0_Chr6g0305741 Rosa chinensis HOM05D003689 ORTHO05D003950 1.2e-20 105.9 92 56.5
Nitab4.5_0004562g0020 Nicotiana tabacum HOM05D003689 ORTHO05D003950 2.0e-20 105.1 90 58.9
VMungo0331G0581 Vigna mungo HOM05D003689 ORTHO05D003950 2.7e-20 104.8 92 59.8
Cfa013343 Carpinus fangiana HOM05D003689 ORTHO05D003950 4.5e-20 104.0 92 56.5
CiPaw.07G207300 Carya illinoinensis HOM05D003689 ORTHO05D003950 5.9e-20 103.6 84 60.7
Gohir.D08G272300 Gossypium hirsutum HOM05D003689 ORTHO05D003950 5.9e-20 103.6 81 64.2
Gorai.004G290700 Gossypium raimondii HOM05D003689 ORTHO05D003950 5.9e-20 103.6 81 64.2
Sp6g23340 Schrenkiella parvula HOM05D000055 ORTHO05D003950 5.9e-20 103.6 91 60.4
Haze_21848 Corylus avellana HOM05D003689 ORTHO05D003950 7.7e-20 103.2 92 56.5
Migut.J01154 Erythranthe guttata HOM05D003689 ORTHO05D003950 7.7e-20 103.2 82 59.8
Manes.16G066100 Manihot esculenta HOM05D003689 ORTHO05D003950 7.7e-20 103.2 145 42.8
Sopen07g016320 Solanum pennellii HOM05D003689 ORTHO05D003950 7.7e-20 103.2 88 59.1
Glyma.05G230700 Glycine max HOM05D003689 ORTHO05D003950 1.0e-19 102.8 88 58.0
Thecc.09G039700 Theobroma cacao HOM05D003689 ORTHO05D003950 1.0e-19 102.8 81 60.5
Lj4g0026082 Lotus japonicus HOM05D003689 ORTHO05D003950 1.3e-19 102.4 92 57.6
GSVIVG01035672001 Vitis vinifera HOM05D003689 ORTHO05D003950 1.3e-19 102.4 83 60.2
Ciclev10007728m.g Citrus clementina HOM05D003689 ORTHO05D003950 2.3e-19 101.7 86 57.0
FAN15G3321 Fragaria x ananassa HOM05D003689 ORTHO05D003950 2.3e-19 101.7 97 52.6
PSO210G3978 Papaver somniferum HOM05D003689 ORTHO05D003950 2.3e-19 101.7 143 43.4
Prupe.1G452700 Prunus persica HOM05D003689 ORTHO05D003950 2.3e-19 101.7 95 52.6
CSS0006196 Camellia sinensis var. sinensis HOM05D003689 ORTHO05D003950 2.9e-19 101.3 73 68.5
PSO210G7239 Papaver somniferum HOM05D003689 ORTHO05D003950 2.9e-19 101.3 97 52.6
FvH4_2g36130 Fragaria vesca HOM05D003689 ORTHO05D003950 3.8e-19 100.9 91 54.9
FAN27G3406 Fragaria x ananassa HOM05D003689 ORTHO05D003950 3.8e-19 100.9 91 54.9
Lalb_Chr14g0371561 Lupinus albus HOM05D003689 ORTHO05D003950 3.8e-19 100.9 92 56.5
Gohir.A08G250800 Gossypium hirsutum HOM05D003689 ORTHO05D003950 6.6e-19 100.1 81 63.0
MBI04_g43860_MAGBIO Magnolia biondii HOM05D003689 ORTHO05D003950 6.6e-19 100.1 142 43.7
Phvul.010G165600 Phaseolus vulgaris HOM05D003689 ORTHO05D003950 6.6e-19 100.1 75 64.0
THA.LOC104811116 Tarenaya hassleriana HOM05D003689 ORTHO05D003950 8.6e-19 99.8 83 57.8
HanXRQChr06g0180011 Helianthus annuus HOM05D003689 ORTHO05D003950 1.9e-18 98.6 118 44.9
AT5G21222 Arabidopsis thaliana HOM05D000055 ORTHO05D003950 2.5e-18 98.2 73 67.1
CARHR191690 Cardamine hirsuta HOM05D000055 ORTHO05D003950 2.5e-18 98.2 73 65.8
ClCG11G014000 Citrullus lanatus HOM05D008234 ORTHO05D010422 3.3e-18 97.8 94 53.2
Sabra18G0038000 Salix brachista HOM05D003689 ORTHO05D003950 3.3e-18 97.8 84 58.3
TWI34G0694 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 3.3e-18 97.8 143 39.9
AL6G32800 Arabidopsis lyrata HOM05D000055 ORTHO05D003950 4.2e-18 97.4 73 65.8
BcaC04g19516 Brassica carinata HOM05D000055 ORTHO05D000057 4.2e-18 97.4 73 65.8
C09p54880 Brassica napus HOM05D000055 ORTHO05D003950 4.2e-18 97.4 73 65.8
BolC9t58349H Brassica oleracea HOM05D000055 ORTHO05D003950 4.2e-18 97.4 73 65.8
Carub.0006s1949 Capsella rubella HOM05D000055 ORTHO05D003950 4.2e-18 97.4 73 65.8
Thhalv10012659m.g Eutrema salsugineum HOM05D000055 ORTHO05D003950 5.5e-18 97.1 73 65.8
Sc18g0001340 Simmondsia chinensis HOM05D003689 ORTHO05D003950 5.5e-18 97.1 85 57.6
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 5.5e-18 97.1 122 44.3
Potri.018G037200 Populus trichocarpa HOM05D003689 ORTHO05D003950 7.2e-18 96.7 89 57.3
arahy.Tifrunner.gnm1.ann1.3U27PV Arachis hypogaea HOM05D003689 ORTHO05D003950 1.2e-17 95.9 90 55.6
Aqoxy7G03846 Aquilegia oxysepala HOM05D003689 ORTHO05D003950 1.6e-17 95.5 90 54.4
arahy.Tifrunner.gnm1.ann1.EDC6ME Arachis hypogaea HOM05D003689 ORTHO05D003950 2.1e-17 95.1 84 58.3
arahy.Tifrunner.gnm1.ann1.K2CPZ4 Arachis hypogaea HOM05D003689 ORTHO05D003950 2.1e-17 95.1 84 58.3
A10p18880 Brassica napus HOM05D000055 ORTHO05D003950 2.1e-17 95.1 85 60.0
BraA10t43967Z Brassica rapa HOM05D000055 ORTHO05D003950 2.1e-17 95.1 85 60.0
Ca_17333_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 2.8e-17 94.7 145 43.4
arahy.Tifrunner.gnm1.ann1.SBHH31 Arachis hypogaea HOM05D003689 ORTHO05D003950 3.6e-17 94.4 90 55.6
MELO3C003585.2 Cucumis melo HOM05D003689 ORTHO05D003950 4.7e-17 94.0 102 48.0
TWI63G0545 Tripterygium wilfordii HOM05D003689 ORTHO05D003950 4.7e-17 94.0 93 52.7
Ca_12812_v3 Cicer arietinum L. HOM05D003689 ORTHO05D003950 6.1e-17 93.6 90 48.9
CDE02G3880 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 8.0e-17 93.2 108 47.2
Cc00_g17700 Coffea canephora HOM05D003689 ORTHO05D003950 2.3e-16 91.7 105 47.6
CDE04G3773 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 3.0e-16 91.3 88 55.7
ATR0315G024 Amborella trichopoda HOM05D003689 ORTHO05D003950 4.0e-16 90.9 93 47.3
DCAR_004497 Daucus carota HOM05D003689 ORTHO05D003950 4.0e-16 90.9 72 61.1
Sc23g0005900 Simmondsia chinensis HOM05D003689 ORTHO05D003950 6.8e-16 90.1 73 60.3
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 8.9e-16 89.7 85 49.4
DCAR_012069 Daucus carota HOM05D001279 ORTHO05D001636 1.2e-15 89.4 54 79.6
BcaC04g23586 Brassica carinata HOM05D003689 ORTHO05D003950 2.0e-15 88.6 73 57.5
A09p06120 Brassica napus HOM05D003689 ORTHO05D003950 2.0e-15 88.6 73 57.5
C09p06740 Brassica napus HOM05D003689 ORTHO05D003950 2.0e-15 88.6 73 57.5
BolC9t53595H Brassica oleracea HOM05D003689 ORTHO05D003950 2.0e-15 88.6 73 57.5
BraA09t36253Z Brassica rapa HOM05D003689 ORTHO05D003950 2.0e-15 88.6 73 57.5
Medtr1g008310 Medicago truncatula HOM05D003689 ORTHO05D003950 2.0e-15 88.6 93 48.4
arahy.Tifrunner.gnm1.ann1.WWE821 Arachis hypogaea HOM05D003689 ORTHO05D003950 2.6e-15 88.2 89 46.1
BcaB04g19771 Brassica carinata HOM05D003689 ORTHO05D003950 4.4e-15 87.4 73 54.8
Aa31LG1G13560 Aethionema arabicum HOM05D000055 ORTHO05D003950 5.7e-15 87.0 71 59.2
Thhalv10003915m.g Eutrema salsugineum HOM05D003689 ORTHO05D003950 5.7e-15 87.0 85 49.4
arahy.Tifrunner.gnm1.ann1.6C9669 Arachis hypogaea HOM05D003689 ORTHO05D003950 7.5e-15 86.7 89 44.9
Glyma.14G141800 Glycine max HOM05D003689 ORTHO05D003950 7.5e-15 86.7 90 46.7
Lsat_1_v5_gn_8_95421 Lactuca sativa HOM05D003689 ORTHO05D003950 1.3e-14 85.9 83 54.2
Hund09215 Selenicereus undatus HOM05D003689 ORTHO05D003950 1.3e-14 85.9 74 58.1
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 1.7e-14 85.5 105 42.9
Oeu002241.1 Olea europaea HOM05D003689 ORTHO05D003950 1.7e-14 85.5 54 72.2
Peaxi162Scf00523g00624 Petunia axillaris HOM05D003689 ORTHO05D003950 2.2e-14 85.1 73 56.2
Hma1.2p1_0140F.1_g063530 Hydrangea macrophylla HOM05D003689 ORTHO05D003950 2.8e-14 84.7 69 59.4
Atru.chr7.2161 Acer truncatum HOM05D003689 ORTHO05D003950 3.7e-14 84.3 65 63.1
AL6G37510 Arabidopsis lyrata HOM05D003689 ORTHO05D003950 3.7e-14 84.3 73 52.1
Nitab4.5_0003338g0050 Nicotiana tabacum HOM05D003689 ORTHO05D003950 4.9e-14 84.0 74 54.1
PGR102G1523 Punica granatum HOM05D003689 ORTHO05D003950 4.9e-14 84.0 79 53.2
Lalb_Chr14g0362401 Lupinus albus HOM05D003689 ORTHO05D003950 6.3e-14 83.6 92 43.5
Nitab4.5_0000052g0100 Nicotiana tabacum HOM05D003689 ORTHO05D003950 6.3e-14 83.6 73 54.8
PGSC0003DMG400014513 Solanum tuberosum HOM05D003689 ORTHO05D003950 6.3e-14 83.6 99 43.4
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 8.3e-14 83.2 77 49.4
Nn7g35992 Nelumbo nucifera HOM05D003689 ORTHO05D003950 8.3e-14 83.2 143 40.6
Sopen08g022090 Solanum pennellii HOM05D003689 ORTHO05D003950 8.3e-14 83.2 96 43.8
TAR624G0021 Trochodendron aralioides HOM05D003689 ORTHO05D003950 8.3e-14 83.2 101 45.5
Actinidia31220 Actinidia chinensis HOM05D003689 ORTHO05D003950 1.1e-13 82.8 116 41.4
MSTRG.14008 Avicennia marina HOM05D003689 ORTHO05D003950 1.1e-13 82.8 71 54.9
BcaB06g28622 Brassica carinata HOM05D000888 ORTHO05D000740 1.1e-13 82.8 73 52.1
Solyc08g068230.4 Solanum lycopersicum HOM05D003689 ORTHO05D003950 1.1e-13 82.8 96 43.8
THA.LOC104799204 Tarenaya hassleriana HOM05D003689 ORTHO05D003950 1.1e-13 82.8 74 51.4
Nn8g39148 Nelumbo nucifera HOM05D003689 ORTHO05D003950 1.8e-13 82.0 141 40.4
SGA_v2.0_scaffold163G38088 Striga asiatica HOM05D003689 ORTHO05D003950 2.4e-13 81.6 111 36.9
Duzib187G1779 Durio zibethinus HOM05D003689 ORTHO05D003950 4.1e-13 80.9 146 37.0
Psat0s586g0040 Pisum sativum HOM05D003689 ORTHO05D003950 4.1e-13 80.9 94 50.0
Ah.16g105250 Amaranthus hybridus HOM05D003689 ORTHO05D003950 1.2e-12 79.3 97 42.3
ECA238G3870 Erigeron canadensis HOM05D003689 ORTHO05D009814 1.2e-12 79.3 95 45.3
Ah.14g082150 Amaranthus hybridus HOM05D003689 ORTHO05D003950 2.7e-12 78.2 69 52.2
EL10Ac2g04074 Beta vulgaris HOM05D003689 ORTHO05D003950 2.7e-12 78.2 96 43.8
MBI04_g29969_MAGBIO Magnolia biondii HOM05D003689 ORTHO05D003950 2.7e-12 78.2 94 41.5
Cpa.g.sc23.95 Carica papaya HOM05D003689 ORTHO05D003950 3.5e-12 77.8 144 38.9
Medtr8g103480 Medicago truncatula HOM05D003689 ORTHO05D003950 5.9e-12 77.0 67 55.2
AUR62021489 Chenopodium quinoa HOM05D003689 ORTHO05D003950 1.0e-11 76.3 69 52.2
Zm00001eb315460 Zea mays HOM05D003689 ORTHO05D003950 1.3e-11 75.9 127 33.9
arahy.Tifrunner.gnm1.ann1.Z43HYI Arachis hypogaea HOM05D003689 ORTHO05D003950 1.7e-11 75.5 48 79.2
Sed0002455 Sechium edule HOM05D003689 ORTHO05D003950 1.7e-11 75.5 78 46.2
AUR62010979 Chenopodium quinoa HOM05D003689 ORTHO05D003950 2.3e-11 75.1 69 50.7
MD02G1045100 Malus domestica HOM05D003689 ORTHO05D003950 2.3e-11 75.1 49 75.5
AUR62009331 Chenopodium quinoa HOM05D003689 ORTHO05D003950 2.9e-11 74.7 73 49.3
AUR62023017 Chenopodium quinoa HOM05D003689 ORTHO05D003950 2.9e-11 74.7 73 49.3
EL10Ac8g18473 Beta vulgaris HOM05D003689 ORTHO05D003950 3.9e-11 74.3 70 50.0
CAN.G797.4 Capsicum annuum HOM05D003689 ORTHO05D003950 1.1e-10 72.8 82 43.9
EL10Ac8g18479 Beta vulgaris HOM05D003689 ORTHO05D003950 2.5e-10 71.6 141 35.5
Os01g0228400 Oryza sativa ssp. japonica HOM05D003689 ORTHO05D003950 3.3e-10 71.2 73 43.8
EL10Ac8g18465 Beta vulgaris HOM05D003689 ORTHO05D003950 4.3e-10 70.9 141 34.0
vmacro20709 Vaccinium macrocarpon HOM05D003689 ORTHO05D003950 4.3e-10 70.9 45 68.9
Eucgr.C02891 Eucalyptus grandis HOM05D003689 ORTHO05D003950 5.6e-10 70.5 139 31.7
Lj8C603T17 Lonicera japonica HOM05D003689 ORTHO05D003950 1.2e-09 69.3 64 51.6
PGR044G1205 Punica granatum HOM05D003689 ORTHO05D003950 1.2e-09 69.3 49 69.4
Cpa.g.sc78.81 Carica papaya HOM05D003689 ORTHO05D003950 2.1e-09 68.6 143 35.0
Potri.006G242600 Populus trichocarpa HOM05D003689 ORTHO05D003950 2.8e-09 68.2 145 35.2
SGA_v2.0_scaffold163G38089 Striga asiatica HOM05D003689 ORTHO05D003950 2.8e-09 68.2 73 46.6
EL10Ac8g18466 Beta vulgaris HOM05D003689 ORTHO05D003950 6.1e-09 67.0 67 46.3
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 1.4e-08 65.9 54 51.9
EL10Ac8g18468 Beta vulgaris HOM05D003689 ORTHO05D003950 1.2e-07 62.8 49 61.2
SEGI_12691 Sequoiadendron giganteum HOM05D003689 ORTHO05D003950 4.9e-06 57.4 70 42.9


User provided reference genes

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