Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p042139 Quercus lobata HOM05D009800 ORTHO05D011618 1.9e-190 669.1 356 100.0
CiPaw.04G159000 Carya illinoinensis HOM05D009800 ORTHO05D011618 6.4e-53 212.2 320 44.1
TAR636G0821 Trochodendron aralioides HOM05D009800 ORTHO05D011618 8.4e-37 158.7 355 38.9
Prupe.7G221600 Prunus persica HOM05D009800 ORTHO05D011618 3.5e-35 153.3 363 35.8
Cfa003196 Carpinus fangiana HOM05D064020 ORTHO05D011618 7.6e-30 135.6 338 37.6
Duzib168G0690 Durio zibethinus HOM05D009800 ORTHO05D011618 1.7e-29 134.4 363 35.5
Haze_25810 Corylus avellana HOM05D064020 ORTHO05D011618 1.0e-26 125.2 309 35.9
RcHm_v2.0_Chr2g0091571 Rosa chinensis HOM05D009800 ORTHO05D011618 8.7e-26 122.1 359 33.1
COL.COLO4_34766 Corchorus olitorius HOM05D009800 ORTHO05D011618 3.3e-25 120.2 357 34.7
Thecc.09G102100 Theobroma cacao HOM05D009800 ORTHO05D011618 1.6e-24 117.9 365 32.3
Dinv36697 Davidia involucrata HOM05D009800 ORTHO05D011618 1.8e-23 114.4 249 37.3
FAN28G1906 Fragaria x ananassa HOM05D009800 ORTHO05D011618 2.7e-19 100.5 360 30.8
FAN19G0069 Fragaria x ananassa HOM05D009800 ORTHO05D011618 7.9e-19 99.0 358 30.4
FAN26G1403 Fragaria x ananassa HOM05D009800 ORTHO05D011618 1.3e-18 98.2 358 31.0
FvH4_1g05950 Fragaria vesca HOM05D009800 ORTHO05D011618 6.7e-18 95.9 358 30.7
FAN23G0260 Fragaria x ananassa HOM05D009800 ORTHO05D011618 8.7e-18 95.5 342 30.4
MD15G1194600 Malus domestica HOM05D009800 ORTHO05D011618 5.6e-17 92.8 313 30.0
Dinv41660 Davidia involucrata HOM05D001922 ORTHO05D001441 2.4e-15 87.4 77 59.7
FAN26G2992 Fragaria x ananassa HOM05D009800 ORTHO05D011618 6.9e-15 85.9 371 28.6
Nn8g39099 Nelumbo nucifera HOM05D009800 ORTHO05D001848 9.0e-15 85.5 345 28.4
MD02G1064100 Malus domestica HOM05D009800 ORTHO05D011618 4.9e-13 79.7 320 29.4
CSS0017187 Camellia sinensis var. sinensis HOM05D003439 ORTHO05D004062 5.5e-12 76.3 284 31.0
Glyma.05G227600 Glycine max HOM05D012031 ORTHO05D014454 6.0e-11 72.8 367 29.4
DCAR_012048 Daucus carota HOM05D009800 ORTHO05D011618 1.9e-09 67.8 148 33.8
Rhsim05G0041100 Rhododendron simsii HOM05D009800 ORTHO05D011618 2.5e-09 67.4 121 36.4
Ciclev10002567m.g Citrus clementina HOM05D002243 ORTHO05D001848 4.3e-09 66.6 66 50.0
Aqoxy6G01532 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 1.3e-08 65.1 68 47.1
VMungo0251G3561 Vigna mungo HOM05D012031 ORTHO05D014454 4.8e-08 63.2 343 28.9
Aqoxy7G03883 Aquilegia oxysepala HOM05D012031 ORTHO05D001848 8.2e-08 62.4 313 26.2
Dinv01223 Davidia involucrata HOM05D002243 ORTHO05D001848 8.2e-08 62.4 66 48.5
FAN18G0601 Fragaria x ananassa HOM05D002243 ORTHO05D001848 1.1e-07 62.0 68 48.5
RcHm_v2.0_Chr7g0232141 Rosa chinensis HOM05D002243 ORTHO05D001848 1.1e-07 62.0 68 48.5
FvH4_5g33410 Fragaria vesca HOM05D002243 ORTHO05D001848 1.8e-07 61.2 68 48.5
FAN08G2076 Fragaria x ananassa HOM05D002243 ORTHO05D001848 1.8e-07 61.2 68 48.5
QL12p040753 Quercus lobata HOM05D002243 ORTHO05D001848 1.8e-07 61.2 67 50.7
CiPaw.07G201100 Carya illinoinensis HOM05D002243 ORTHO05D001848 2.4e-07 60.8 68 48.5
DCAR_019339 Daucus carota HOM05D002243 ORTHO05D001848 2.4e-07 60.8 68 54.4
Nn6g35306 Nelumbo nucifera HOM05D009800 ORTHO05D011618 2.4e-07 60.8 288 32.3
Prupe.1G544100 Prunus persica HOM05D002243 ORTHO05D001848 2.4e-07 60.8 66 48.5
Glyma.08G034500 Glycine max HOM05D012031 ORTHO05D014454 3.1e-07 60.5 348 27.6
PSO210G1075 Papaver somniferum HOM05D049672 ORTHO05D011618 3.1e-07 60.5 303 29.7
Eucgr.F02202 Eucalyptus grandis HOM05D002243 ORTHO05D001848 4.1e-07 60.1 70 50.0
DCAR_025837 Daucus carota HOM05D002243 ORTHO05D001848 5.3e-07 59.7 66 48.5
MD15G1395300 Malus domestica HOM05D002243 ORTHO05D001848 6.9e-07 59.3 66 47.0
Nn6g34568 Nelumbo nucifera HOM05D002243 ORTHO05D001848 6.9e-07 59.3 67 49.3
SGA_v2.0_scaffold269G46251 Striga asiatica HOM05D002243 ORTHO05D001848 6.9e-07 59.3 65 52.3
MBI04_g06589_MAGBIO Magnolia biondii HOM05D002243 ORTHO05D001848 9.0e-07 58.9 92 40.2
ECA240G0887 Erigeron canadensis HOM05D029243 ORTHO05D045208 1.2e-06 58.5 117 35.9
PSO782G0611 Papaver somniferum HOM05D002243 ORTHO05D001848 1.2e-06 58.5 95 43.2
PSO832G2889 Papaver somniferum HOM05D002243 ORTHO05D001848 1.2e-06 58.5 95 43.2
Thecc.08G081200 Theobroma cacao HOM05D002243 ORTHO05D001848 1.5e-06 58.2 66 50.0
TAR381G0567 Trochodendron aralioides HOM05D002243 ORTHO05D001848 1.5e-06 58.2 68 48.5
vmacro01929 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 2.0e-06 57.8 66 45.5
Rhsim10G0087400 Rhododendron simsii HOM05D002243 ORTHO05D001848 2.6e-06 57.4 65 49.2
Oeu061818.1 Olea europaea HOM05D002243 ORTHO05D001848 3.4e-06 57.0 88 43.2
CiPaw.08G028200 Carya illinoinensis HOM05D002243 ORTHO05D001848 4.5e-06 56.6 67 46.3
Hma1.2p1_1953F.1_g308845 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 4.5e-06 56.6 65 46.2
Hma1.2p1_1953F.1_g308850 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 4.5e-06 56.6 65 46.2
Oeu059798.2 Olea europaea HOM05D002243 ORTHO05D001848 4.5e-06 56.6 90 40.0
Peaxi162Scf00096g00157 Petunia axillaris HOM05D002243 ORTHO05D001848 5.9e-06 56.2 89 36.0
Duzib041G0685 Durio zibethinus HOM05D002243 ORTHO05D001848 7.6e-06 55.8 90 38.9
Manes.10G087900 Manihot esculenta HOM05D002243 ORTHO05D001848 7.6e-06 55.8 103 40.8
Nitab4.5_0000396g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 7.6e-06 55.8 86 38.4
Nitab4.5_0006325g0010 Nicotiana tabacum HOM05D002243 ORTHO05D001848 7.6e-06 55.8 86 38.4
Phvul.002G309800 Phaseolus vulgaris HOM05D012031 ORTHO05D014454 7.6e-06 55.8 359 27.3
PGR042G1190 Punica granatum HOM05D002243 ORTHO05D001848 1.0e-05 55.5 80 36.2
GSVIVG01037020001 Vitis vinifera HOM05D002243 ORTHO05D001848 1.0e-05 55.5 43 58.1


User provided reference genes

Program Settings