Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 4.4e-280 967.2 463 100.0
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.8e-169 599.7 456 66.7
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 5.4e-161 571.6 458 63.8
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 2.0e-160 569.7 456 64.0
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 1.1e-158 563.9 456 63.4
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 2.8e-157 559.3 459 62.1
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 4.7e-157 558.5 429 66.7
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.8e-156 556.6 456 60.7
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 3.4e-155 552.4 456 61.8
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 2.2e-154 549.7 450 61.6
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 8.3e-154 547.7 456 61.2
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 1.9e-153 546.6 455 61.3
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 3.5e-152 542.3 458 60.9
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 4.6e-152 542.0 451 61.2
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 3.9e-151 538.9 457 60.0
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 4.3e-150 535.4 451 59.9
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 5.6e-150 535.0 452 60.0
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 4.7e-149 531.9 462 58.9
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 2.3e-148 529.6 450 59.1
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 5.2e-148 528.5 452 58.8
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 6.8e-148 528.1 457 59.5
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.0e-147 526.6 457 59.1
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 2.6e-147 526.2 462 57.8
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 2.6e-147 526.2 452 58.2
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.4e-147 525.8 452 57.5
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.4e-147 525.8 452 58.0
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 4.4e-147 525.4 450 58.0
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 1.7e-146 523.5 451 56.5
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 2.9e-146 522.7 451 56.5
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 3.7e-146 522.3 452 58.0
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.4e-145 520.4 458 57.9
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 7.1e-145 518.1 515 53.8
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 1.2e-144 517.3 460 56.3
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 3.5e-144 515.8 460 56.3
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 1.0e-143 514.2 449 56.3
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.3e-143 513.8 515 53.6
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 2.5e-142 509.6 454 57.9
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 2.1e-141 506.5 469 54.8
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.4e-140 503.8 449 55.9
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 6.8e-140 501.5 450 55.8
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 7.6e-139 498.0 451 56.8
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 7.6e-139 498.0 483 52.6
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 2.2e-138 496.5 451 54.8
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 6.4e-138 495.0 455 54.7
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 6.4e-138 495.0 452 55.8
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.1e-137 494.2 459 54.7
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 1.9e-137 493.4 603 48.4
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 3.2e-137 492.7 452 55.8
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 2.7e-136 489.6 459 53.8
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 1.6e-133 480.3 463 53.8
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 1.4e-129 467.2 451 53.2
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 1.0e-127 461.1 451 51.2
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 1.7e-127 460.3 452 54.6
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 5.6e-126 455.3 424 54.5
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 4.0e-124 449.1 461 51.0
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 9.0e-124 448.0 454 51.1
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 9.0e-124 448.0 454 51.1
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 2.0e-123 446.8 454 50.9
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 2.6e-123 446.4 451 50.3
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 4.9e-122 442.2 457 49.7
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 1.4e-121 440.7 453 52.3
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 4.2e-121 439.1 448 50.4
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 7.9e-120 434.9 561 45.3
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 3.3e-102 376.3 367 52.0
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 1.4e-92 344.4 210 73.8
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 1.7e-90 337.4 252 64.7
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 2.0e-83 313.9 391 45.5
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 2.6e-78 297.0 189 69.8
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 1.7e-77 294.3 457 36.3
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 9.1e-76 288.5 457 36.8
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.2e-75 288.1 405 43.0
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 5.7e-70 269.2 297 49.8
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 5.5e-65 252.7 179 64.8
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 7.5e-62 242.3 169 64.5
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 8.3e-61 238.8 246 48.0
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 7.8e-59 232.3 331 40.5
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 1.4e-55 221.5 141 68.1
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.0e-47 195.3 456 29.6
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 5.4e-44 183.0 116 71.6
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 2.7e-43 180.6 242 45.0
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 1.1e-41 175.3 128 66.4
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.4e-39 168.3 499 26.3
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.5e-30 138.3 73 78.1
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 2.0e-30 137.9 71 81.7
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 7.6e-30 136.0 244 33.6
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 6.4e-29 132.9 102 63.7
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 6.4e-29 132.9 103 64.1
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 4.6e-27 126.7 69 73.9
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 4.6e-27 126.7 69 73.9
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.8e-27 125.9 113 57.5
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.3e-26 125.2 102 53.9
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 9.6e-25 119.0 70 78.6
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.2e-24 118.6 70 77.1
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.7e-24 116.7 70 75.7
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.4e-23 115.2 70 75.7
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.5e-19 100.5 186 33.3
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.8e-19 99.4 91 56.0
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 1.3e-18 98.6 55 78.2
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 3.9e-18 97.1 73 63.0
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.5e-17 95.1 53 67.9
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 2.5e-17 94.4 217 29.5
QL10p034885 Quercus lobata HOM05D004012 ORTHO05D000004 9.9e-14 82.4 100 45.0
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 4.2e-12 77.0 61 54.1
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 7.1e-12 76.3 54 57.4
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 1.3e-10 72.0 99 48.5
QL07p025072 Quercus lobata HOM05D000115 ORTHO05D000004 2.1e-08 64.7 68 50.0
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 4.8e-08 63.5 54 59.3
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 1.8e-07 61.6 133 31.6
QL02p081065 Quercus lobata HOM05D000003 ORTHO05D000004 6.9e-07 59.7 133 30.8
QL06p005440 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-06 58.9 133 30.8
QL04p048819 Quercus lobata HOM05D003044 ORTHO05D001869 1.5e-06 58.5 144 31.2
QL12p000462 Quercus lobata HOM05D001165 ORTHO05D001347 2.0e-06 58.2 94 34.0
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.4e-06 57.4 56 50.0
QL05p033135 Quercus lobata HOM05D000840 ORTHO05D000670 4.5e-06 57.0 94 35.1
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 9.9e-06 55.8 49 59.2


User provided reference genes

Program Settings