Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p038471 Quercus lobata HOM05D000966 ORTHO05D007323 1.4e-154 549.7 287 100.0
Cfa018294 Carpinus fangiana HOM05D000966 ORTHO05D007323 7.6e-105 384.4 267 77.9
CiPaw.15G013800 Carya illinoinensis HOM05D000966 ORTHO05D007323 5.1e-101 371.7 265 76.6
Haze_17793 Corylus avellana HOM05D000966 ORTHO05D007323 2.4e-90 336.3 362 56.6
TAR381G1161 Trochodendron aralioides HOM05D000966 ORTHO05D007323 9.0e-90 334.3 266 68.0
Atru.chr13.2052 Acer truncatum HOM05D000966 ORTHO05D007323 2.3e-85 319.7 263 66.5
MD05G1031500 Malus domestica HOM05D000966 ORTHO05D007323 3.4e-81 305.8 253 69.6
Prupe.8G038500 Prunus persica HOM05D000966 ORTHO05D007323 3.4e-81 305.8 260 65.4
Potri.005G195400 Populus trichocarpa HOM05D000966 ORTHO05D007323 2.9e-80 302.8 264 63.6
Sabra05G0148900 Salix brachista HOM05D000966 ORTHO05D007323 1.4e-79 300.4 264 62.9
RcHm_v2.0_Chr1g0329491 Rosa chinensis HOM05D000966 ORTHO05D007323 2.5e-79 299.7 265 64.5
Gohir.A06G111200 Gossypium hirsutum HOM05D000966 ORTHO05D007323 7.1e-79 298.1 266 62.0
Thecc.08G157600 Theobroma cacao HOM05D000966 ORTHO05D007323 7.1e-79 298.1 265 63.4
FAN01G0621 Fragaria x ananassa HOM05D000966 ORTHO05D007323 1.6e-78 297.0 265 64.9
FAN03G0153 Fragaria x ananassa HOM05D000966 ORTHO05D007323 4.6e-78 295.4 265 64.9
Duzib116G0132 Durio zibethinus HOM05D000966 ORTHO05D007323 1.3e-77 293.9 265 61.5
Gorai.010G131600 Gossypium raimondii HOM05D000966 ORTHO05D007323 3.9e-77 292.4 259 61.8
Gohir.D06G115100 Gossypium hirsutum HOM05D000966 ORTHO05D007323 5.1e-77 292.0 259 61.8
Manes.12G141700 Manihot esculenta HOM05D000966 ORTHO05D007323 2.5e-76 289.7 264 61.7
Cpa.g.sc49.86 Carica papaya HOM05D000966 ORTHO05D007323 8.2e-75 284.6 263 59.3
TWI34G1291 Tripterygium wilfordii HOM05D000966 ORTHO05D007323 8.2e-75 284.6 271 62.0
arahy.Tifrunner.gnm1.ann1.83HUSC Arachis hypogaea HOM05D000966 ORTHO05D007323 1.1e-74 284.3 262 63.4
arahy.Tifrunner.gnm1.ann1.Z2GQ5K Arachis hypogaea HOM05D000966 ORTHO05D007323 1.1e-74 284.3 262 62.6
CANSAT25G2301 Cannabis sativa HOM05D000966 ORTHO05D007323 9.0e-74 281.2 266 60.5
ClCG08G008820 Citrullus lanatus HOM05D000966 ORTHO05D007323 1.5e-73 280.4 267 58.1
Ciclev10000952m.g Citrus clementina HOM05D000966 ORTHO05D007323 3.4e-73 279.3 253 61.3
Ca_10671_v3 Cicer arietinum L. HOM05D000966 ORTHO05D007323 4.5e-73 278.9 266 60.9
VMungo0720G0673 Vigna mungo HOM05D000966 ORTHO05D007323 4.5e-73 278.9 265 60.8
Nn3g18699 Nelumbo nucifera HOM05D000966 ORTHO05D007323 7.6e-73 278.1 265 58.5
Sed0009464 Sechium edule HOM05D000966 ORTHO05D007323 2.9e-72 276.2 267 58.8
Lalb_Chr02g0141501 Lupinus albus HOM05D000966 ORTHO05D007323 3.8e-72 275.8 266 60.9
Phvul.007G082400 Phaseolus vulgaris HOM05D000966 ORTHO05D007323 4.2e-71 272.3 265 59.6
CsaV3_6G005070 Cucumis sativus L. HOM05D000966 ORTHO05D007323 7.9e-70 268.1 268 58.6
Psat6g191160 Pisum sativum HOM05D000966 ORTHO05D007323 2.3e-69 266.5 266 59.8
MELO3C008329.2 Cucumis melo HOM05D000966 ORTHO05D007323 6.7e-69 265.0 267 57.7
Hma1.2p1_0081F.1_g042500 Hydrangea macrophylla HOM05D000966 ORTHO05D007323 1.3e-67 260.8 265 53.6
Glyma.20G168900 Glycine max HOM05D000966 ORTHO05D007323 2.8e-67 259.6 265 57.7
PGR042G2706 Punica granatum HOM05D000966 ORTHO05D007323 8.2e-67 258.1 265 53.2
Glyma.10G222800 Glycine max HOM05D000966 ORTHO05D007323 1.4e-66 257.3 265 56.2
TPR.G17050 Trifolium pratense HOM05D000966 ORTHO05D007323 2.4e-66 256.5 267 58.8
Lj5g0028132 Lotus japonicus HOM05D000966 ORTHO05D007323 4.1e-66 255.8 266 58.3
Eucgr.F02689 Eucalyptus grandis HOM05D000966 ORTHO05D007323 1.2e-65 254.2 255 58.4
Dinv25888 Davidia involucrata HOM05D000044 ORTHO05D002853 3.4e-65 252.7 252 57.1
Sc20g0003630 Simmondsia chinensis HOM05D000966 ORTHO05D007323 5.9e-65 251.9 263 55.5
PSO170G0768 Papaver somniferum HOM05D000966 ORTHO05D007323 1.0e-64 251.1 277 55.2
PSO700G0340 Papaver somniferum HOM05D000966 ORTHO05D007323 1.1e-63 247.7 271 52.8
Medtr1g098000 Medicago truncatula HOM05D000966 ORTHO05D007323 2.3e-61 240.0 265 55.5
Medtr1g098370 Medicago truncatula HOM05D000966 ORTHO05D007323 2.5e-60 236.5 265 55.1
Aqoxy4G02511 Aquilegia oxysepala HOM05D000966 ORTHO05D007323 5.9e-57 225.3 265 50.9
THA.LOC104812030 Tarenaya hassleriana HOM05D000966 ORTHO05D007323 7.7e-57 224.9 240 56.2
Aa31LG4G6790 Aethionema arabicum HOM05D000966 ORTHO05D007323 2.2e-56 223.4 239 54.0
Carub.0002s2362 Capsella rubella HOM05D000966 ORTHO05D007323 2.2e-56 223.4 265 50.9
Sp5g31860 Schrenkiella parvula HOM05D000966 ORTHO05D007323 1.4e-55 220.7 263 51.7
GSVIVG01034572001 Vitis vinifera HOM05D000966 ORTHO05D007323 7.2e-55 218.4 264 51.1
AL2G36860 Arabidopsis lyrata HOM05D000966 ORTHO05D007323 1.6e-54 217.2 265 50.2
ATR0584G286 Amborella trichopoda HOM05D000966 ORTHO05D007323 3.0e-53 213.0 260 50.4
Thhalv10018466m.g Eutrema salsugineum HOM05D000966 ORTHO05D007323 3.9e-53 212.6 241 53.5
MSTRG.22010 Avicennia marina HOM05D000966 ORTHO05D007323 6.7e-53 211.8 269 49.4
AT1G76710 Arabidopsis thaliana HOM05D000966 ORTHO05D007323 1.5e-52 210.7 268 48.9
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 1.7e-51 207.2 268 50.4
Hund26681 Selenicereus undatus HOM05D000966 ORTHO05D007323 2.0e-49 200.3 264 45.8
SalBow6G0098 Salvia bowleyana HOM05D000966 ORTHO05D007323 2.6e-49 199.9 260 46.9
BcaC08g47180 Brassica carinata HOM05D001345 ORTHO05D001190 2.2e-48 196.8 248 50.8
Oeu020493.1 Olea europaea HOM05D000966 ORTHO05D007323 2.5e-47 193.4 263 47.9
Migut.N03097 Erythranthe guttata HOM05D000966 ORTHO05D007323 3.2e-47 193.0 269 45.4
Nitab4.5_0000949g0070 Nicotiana tabacum HOM05D000966 ORTHO05D007323 7.2e-47 191.8 257 47.5
Nitab4.5_0000617g0300 Nicotiana tabacum HOM05D000966 ORTHO05D007323 9.4e-47 191.4 257 47.5
AUR62040579 Chenopodium quinoa HOM05D000966 ORTHO05D007323 4.7e-46 189.1 264 44.3
AUR62026672 Chenopodium quinoa HOM05D000966 ORTHO05D007323 1.8e-45 187.2 264 44.7
Peaxi162Scf01038g00145 Petunia axillaris HOM05D000966 ORTHO05D007323 3.0e-45 186.4 263 43.7
Peaxi162Scf00088g00919 Petunia axillaris HOM05D000966 ORTHO05D007323 2.0e-44 183.7 255 43.1
Ah.02g124940 Amaranthus hybridus HOM05D000966 ORTHO05D007323 2.4e-42 176.8 264 42.8
DCAR_001155 Daucus carota HOM05D000966 ORTHO05D007323 2.0e-41 173.7 262 38.9
CDE12G0409 Ceratophyllum demersum HOM05D000966 ORTHO05D007323 5.9e-41 172.2 265 44.9
MD10G1033100 Malus domestica HOM05D000966 ORTHO05D007323 5.0e-40 169.1 133 67.7
CARHR070260 Cardamine hirsuta HOM05D000966 ORTHO05D007323 6.5e-40 168.7 270 43.0
Lj4C702T3 Lonicera japonica HOM05D000966 ORTHO05D007323 1.1e-39 167.9 258 43.8
BcaC08g47221 Brassica carinata HOM05D000966 ORTHO05D007323 3.2e-39 166.4 267 44.9
A07p42380 Brassica napus HOM05D000966 ORTHO05D007323 7.2e-39 165.2 261 44.1
BolC6t40119H Brassica oleracea HOM05D000966 ORTHO05D007323 1.8e-37 160.6 271 43.9
COL.COLO4_13799 Corchorus olitorius HOM05D000966 ORTHO05D007323 4.0e-37 159.5 244 44.7
Cc03_g11990 Coffea canephora HOM05D000966 ORTHO05D007323 2.0e-36 157.1 235 40.4
ECA233G6088 Erigeron canadensis HOM05D000966 ORTHO05D007323 5.7e-36 155.6 264 39.8
BraA07t31764Z Brassica rapa HOM05D000966 ORTHO05D007323 3.7e-35 152.9 278 41.4
unitig_18.g30053 Utricularia gibba HOM05D000966 ORTHO05D007323 3.7e-35 152.9 230 42.6
unitig_8.g4809 Utricularia gibba HOM05D000966 ORTHO05D007323 3.7e-35 152.9 230 42.6
Oeu056130.2 Olea europaea HOM05D000966 ORTHO05D007323 1.1e-34 151.4 254 40.9
EL10Ac1g01592 Beta vulgaris HOM05D000966 ORTHO05D007323 1.4e-34 151.0 146 54.8
C06p50930 Brassica napus HOM05D000966 ORTHO05D007323 1.4e-34 151.0 296 40.5
Medtr1g098030 Medicago truncatula HOM05D000966 ORTHO05D007323 3.8e-32 142.9 216 47.7
Actinidia17776 Actinidia chinensis HOM05D000966 ORTHO05D007323 8.5e-32 141.7 264 40.2
Os04g0429100 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D007323 4.2e-31 139.4 290 35.9
HanXRQChr08g0226091 Helianthus annuus HOM05D000966 ORTHO05D007323 9.4e-31 138.3 240 40.8
CAN.G555.11 Capsicum annuum HOM05D000966 ORTHO05D007323 6.1e-30 135.6 258 38.4
Zm00001eb082920 Zea mays HOM05D000966 ORTHO05D007323 8.0e-30 135.2 282 37.6
PGSC0003DMG400010972 Solanum tuberosum HOM05D000966 ORTHO05D007323 1.8e-29 134.0 259 37.1
Solyc07g008460.3 Solanum lycopersicum HOM05D000966 ORTHO05D007323 3.0e-29 133.3 263 35.0
Sopen07g004390 Solanum pennellii HOM05D000966 ORTHO05D007323 1.2e-28 131.3 255 36.5
Cc00_g32880 Coffea canephora HOM05D000966 ORTHO05D007323 3.4e-28 129.8 227 37.4
Lsat_1_v5_gn_8_521 Lactuca sativa HOM05D000966 ORTHO05D007323 2.7e-25 120.2 240 34.2
A07p42370 Brassica napus HOM05D000966 ORTHO05D007323 1.7e-24 117.5 127 52.0
SEGI_26212 Sequoiadendron giganteum HOM05D000966 ORTHO05D007323 2.3e-24 117.1 289 33.9
Rhsim06G0128000 Rhododendron simsii HOM05D000966 ORTHO05D007323 3.3e-23 113.2 268 34.0
CSS0040268 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D007323 1.2e-22 111.3 123 52.0
MD10G1033000 Malus domestica HOM05D000966 ORTHO05D007323 1.6e-22 110.9 103 66.0
GSVIVG01034571001 Vitis vinifera HOM05D000966 ORTHO05D007323 1.2e-20 104.8 126 47.6
HPP92_009293 Vanilla planifolia HOM05D000966 ORTHO05D007323 4.4e-20 102.8 105 50.5
Cc03_g12000 Coffea canephora HOM05D000966 ORTHO05D007323 3.6e-14 83.2 184 31.5
ECA234G4770 Erigeron canadensis HOM05D000966 ORTHO05D007323 9.5e-07 58.5 66 50.0
A07p42360 Brassica napus HOM05D001345 ORTHO05D001190 2.1e-06 57.4 52 59.6
Nitab4.5_0000065g0220 Nicotiana tabacum HOM05D000966 ORTHO05D007323 3.6e-06 56.6 140 34.3


User provided reference genes

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