Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p037946 Quercus lobata HOM05D005921 ORTHO05D007374 1.1e-155 553.1 262 100.0
QL02p037446 Quercus lobata HOM05D005921 ORTHO05D007374 3.3e-155 551.6 262 99.6
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 9.6e-115 417.2 250 80.0
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 9.0e-105 384.0 246 72.4
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 6.5e-103 377.9 249 70.3
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 2.7e-101 372.5 250 69.2
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 3.5e-101 372.1 250 69.6
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 3.5e-101 372.1 246 69.5
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 3.5e-101 372.1 245 71.8
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 1.0e-100 370.5 250 68.4
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 1.0e-100 370.5 248 71.4
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 2.3e-100 369.4 246 71.1
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 3.0e-100 369.0 240 70.8
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 7.4e-99 364.4 246 73.6
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 7.4e-99 364.4 242 69.0
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 2.8e-98 362.5 250 68.4
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 2.8e-98 362.5 250 68.4
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 2.8e-98 362.5 244 70.5
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 3.7e-98 362.1 246 68.3
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 6.3e-98 361.3 242 69.4
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 1.1e-97 360.5 244 69.3
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 1.8e-97 359.8 242 67.4
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 9.0e-97 357.5 245 69.0
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 1.5e-96 356.7 251 67.7
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 7.7e-96 354.4 296 59.1
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 2.2e-95 352.8 246 69.5
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 2.2e-95 352.8 246 69.5
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 2.2e-95 352.8 246 69.5
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 5.0e-95 351.7 245 66.1
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 6.5e-95 351.3 245 68.2
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 1.9e-94 349.7 245 66.1
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 4.2e-94 348.6 245 69.8
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 5.5e-94 348.2 245 70.2
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 1.8e-92 343.2 246 67.5
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 3.0e-92 342.4 246 64.6
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 3.0e-92 342.4 246 64.6
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 1.1e-91 340.5 246 64.2
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 2.5e-91 339.3 245 65.7
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 3.3e-91 339.0 244 66.8
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 1.7e-90 336.7 259 63.7
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 3.7e-90 335.5 244 62.7
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 4.8e-90 335.1 238 64.7
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 6.3e-90 334.7 238 65.5
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 4.1e-89 332.0 204 73.5
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 2.6e-88 329.3 244 62.7
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 3.4e-88 328.9 240 64.2
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 3.4e-88 328.9 238 64.7
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 1.3e-87 327.0 244 61.1
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 5.0e-87 325.1 249 64.3
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 1.9e-86 323.2 240 65.0
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 2.5e-86 322.8 244 61.1
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 3.2e-86 322.4 240 62.9
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 5.5e-86 321.6 238 63.9
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 7.2e-86 321.2 240 64.6
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 7.2e-86 321.2 245 61.6
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 1.2e-85 320.5 249 61.4
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 1.6e-85 320.1 238 62.6
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 4.7e-85 318.5 238 63.4
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 4.7e-85 318.5 246 65.4
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 1.0e-84 317.4 245 61.6
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 1.0e-84 317.4 240 64.2
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 2.3e-84 316.2 238 61.8
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 3.0e-84 315.8 213 67.1
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 3.9e-84 315.5 238 62.6
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 8.8e-84 314.3 238 62.6
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 2.6e-83 312.8 245 59.6
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 4.4e-83 312.0 247 61.5
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 9.7e-83 310.8 240 63.8
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 2.2e-82 309.7 246 62.2
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 4.8e-82 308.5 252 59.1
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 2.4e-81 306.2 254 59.1
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 5.3e-81 305.1 245 58.8
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 9.1e-81 304.3 259 60.2
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 1.2e-80 303.9 242 60.7
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 2.6e-80 302.8 247 59.9
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 1.7e-79 300.1 246 58.1
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.7e-79 300.1 244 61.1
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 2.9e-79 299.3 244 61.1
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 5.0e-79 298.5 245 64.5
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 6.5e-79 298.1 244 60.7
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 8.5e-79 297.7 243 60.1
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 1.1e-78 297.4 245 60.4
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 4.2e-78 295.4 212 66.0
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 5.5e-78 295.0 247 55.9
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 2.1e-77 293.1 244 59.8
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 1.5e-75 287.0 242 57.9
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 1.3e-74 283.9 247 55.1
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 3.1e-73 279.3 230 59.1
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 2.0e-72 276.6 254 52.4
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 1.7e-71 273.5 249 53.8
BolC2t08936H Brassica oleracea HOM05D005921 ORTHO05D007374 2.1e-69 266.5 231 58.0
BraA02t06773Z Brassica rapa HOM05D005921 ORTHO05D007374 2.1e-69 266.5 224 59.4
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 4.1e-65 252.3 167 68.3
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 6.5e-63 245.0 246 53.3
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 8.5e-63 244.6 148 75.0
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 2.1e-61 240.0 146 73.3
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 4.8e-58 228.8 173 66.5
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 1.7e-55 220.3 240 52.5
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 4.0e-52 209.1 235 47.2
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 3.7e-50 202.6 249 44.6
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 2.3e-47 193.4 180 48.9
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 1.4e-44 184.1 194 55.2
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 3.1e-44 183.0 101 80.2
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 6.8e-44 181.8 175 49.1
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 3.4e-43 179.5 147 53.7
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 5.0e-39 165.6 182 46.2
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 1.9e-38 163.7 112 65.2
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 2.8e-37 159.8 77 89.6
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 1.3e-34 151.0 156 44.9
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 1.9e-33 147.1 81 76.5
SEGI_16149 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 2.8e-29 133.3 80 71.2
MD10G1034600 Malus domestica HOM05D005921 ORTHO05D007374 3.4e-27 126.3 129 50.4
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 1.1e-25 121.3 158 41.1
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 5.4e-25 119.0 155 36.1
Zm00001eb035620 Zea mays HOM05D005921 ORTHO05D007374 1.1e-20 104.8 55 80.0
Sabra02G0051300 Salix brachista HOM05D005921 ORTHO05D007374 8.7e-15 85.1 109 50.5
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 1.6e-13 80.9 149 33.6
Pp3c27_7150 Physcomitrium patens HOM05D005921 ORTHO05D007374 2.0e-11 73.9 101 39.6
Prupe.8G040900 Prunus persica HOM05D005921 ORTHO05D007374 2.9e-10 70.1 96 45.8


User provided reference genes

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