Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 2.3e-190 668.7 334 100.0
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 3.1e-182 641.7 338 96.7
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 5.6e-144 514.6 306 84.6
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 4.8e-143 511.5 354 75.7
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 1.1e-142 510.4 360 75.3
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.4e-142 510.0 332 78.6
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 3.1e-142 508.8 364 74.2
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 1.2e-141 506.9 353 75.1
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 1.5e-141 506.5 332 77.7
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 3.4e-141 505.4 355 74.6
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 5.8e-141 504.6 357 74.5
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 1.0e-140 503.8 305 83.6
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 3.8e-140 501.9 364 73.4
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 6.5e-140 501.1 361 74.0
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 1.9e-139 499.6 304 82.6
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 1.9e-139 499.6 342 76.0
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 3.2e-139 498.8 333 77.8
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 4.2e-139 498.4 305 82.3
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 4.2e-139 498.4 302 83.1
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 1.2e-138 496.9 335 77.0
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 1.2e-138 496.9 306 81.4
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 1.6e-138 496.5 303 82.5
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 2.7e-138 495.7 350 74.0
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 6.0e-138 494.6 303 81.5
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 6.7e-137 491.1 331 75.5
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 2.5e-136 489.2 301 81.1
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 3.3e-136 488.8 349 72.2
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 3.3e-136 488.8 335 76.1
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 3.3e-136 488.8 309 79.9
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 4.3e-136 488.4 321 78.5
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 4.3e-136 488.4 329 76.6
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 5.7e-136 488.0 305 82.3
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 7.4e-136 487.6 304 80.6
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.3e-135 486.9 317 78.9
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 2.8e-135 485.7 300 82.0
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 2.8e-135 485.7 321 77.3
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 3.7e-135 485.3 332 73.8
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 8.2e-135 484.2 355 70.7
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 8.2e-135 484.2 307 80.8
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 1.1e-134 483.8 338 74.3
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 2.4e-134 482.6 319 78.1
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 3.1e-134 482.3 314 77.1
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 5.3e-134 481.5 302 80.5
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 6.9e-134 481.1 314 77.7
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 9.0e-134 480.7 299 80.9
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 9.0e-134 480.7 314 77.7
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.2e-133 480.3 309 79.3
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 2.6e-133 479.2 321 76.6
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 7.6e-133 477.6 317 78.2
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 7.6e-133 477.6 316 75.9
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 1.0e-132 477.2 306 77.5
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 1.3e-132 476.9 300 78.3
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 1.1e-131 473.8 360 70.8
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 4.2e-131 471.9 306 77.8
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 9.3e-131 470.7 304 77.6
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 9.3e-131 470.7 307 76.9
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 2.1e-130 469.5 307 76.5
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 4.6e-130 468.4 300 77.7
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 4.6e-130 468.4 358 70.1
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 6.1e-130 468.0 304 77.3
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 7.9e-130 467.6 298 79.5
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 1.3e-129 466.8 319 74.9
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 3.0e-129 465.7 327 72.5
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 5.1e-129 464.9 300 77.7
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 1.5e-128 463.4 302 77.5
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 1.5e-128 463.4 302 77.5
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 1.5e-128 463.4 303 76.9
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 1.9e-128 463.0 301 77.1
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 1.9e-128 463.0 304 77.0
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.5e-128 462.6 316 75.6
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 4.3e-128 461.8 329 72.6
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 5.9e-125 451.4 267 83.1
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 1.0e-124 450.7 281 78.6
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 1.3e-124 450.3 303 75.9
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 4.2e-123 445.3 303 75.2
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 5.5e-123 444.9 306 75.5
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 6.1e-122 441.4 297 77.4
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 1.4e-121 440.3 307 74.6
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 5.1e-121 438.3 303 72.6
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 1.3e-119 433.7 318 69.8
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 7.7e-117 424.5 300 72.0
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 1.1e-115 420.6 447 54.6
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 1.4e-115 420.2 395 59.0
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 7.4e-112 407.9 307 67.8
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 3.7e-111 405.6 322 64.6
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.8e-110 403.3 307 67.1
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 3.1e-110 402.5 302 67.9
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 6.7e-105 384.8 236 82.2
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 1.1e-104 384.0 400 54.8
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 7.5e-104 381.3 211 89.6
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.3e-102 375.2 286 66.1
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 2.1e-98 363.2 305 63.0
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.1e-94 350.9 217 82.9
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 9.8e-88 327.8 200 82.0
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.5e-83 313.9 361 52.9
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 9.5e-83 311.2 316 54.1
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 2.8e-82 309.7 169 91.1
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.7e-79 300.4 203 76.8
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 2.4e-78 296.6 238 68.9
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 7.0e-78 295.0 238 68.5
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 3.0e-76 289.7 166 88.0
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 5.0e-76 288.9 194 77.3
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.1e-75 287.7 194 76.8
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 1.6e-74 283.9 311 51.8
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 6.8e-73 278.5 189 76.7
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.1e-70 271.2 167 81.4
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 3.0e-68 263.1 255 51.8
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.5e-67 260.8 149 84.6
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.6e-61 240.7 188 67.6
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 1.1e-59 234.6 144 79.9
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.2e-55 220.3 156 71.2
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.9e-54 217.2 259 45.2
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 5.2e-49 199.1 141 70.9
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.1e-43 181.4 108 85.2
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 1.9e-38 164.1 97 78.4
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 2.4e-30 137.1 238 35.3
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 2.1e-29 134.0 120 60.0
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 4.6e-29 132.9 80 82.5
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 5.1e-20 102.8 241 32.0
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 8.7e-20 102.1 100 51.0
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 7.2e-14 82.4 51 74.5
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.3e-11 73.6 47 78.7
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 3.4e-08 63.5 144 36.1


User provided reference genes

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