Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p037460 Quercus lobata HOM05D005921 ORTHO05D007374 1.1e-141 506.5 247 100.0
QL02p037958 Quercus lobata HOM05D005921 ORTHO05D007374 4.3e-141 504.6 247 99.6
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 9.4e-112 407.1 247 81.4
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 3.0e-102 375.6 246 74.4
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 4.4e-101 371.7 246 73.6
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 1.3e-100 370.2 241 74.7
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 4.8e-100 368.2 246 72.8
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 6.3e-100 367.9 237 74.7
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 1.4e-99 366.7 220 78.6
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 9.1e-99 364.0 246 72.8
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 1.6e-98 363.2 220 80.9
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 2.6e-98 362.5 245 71.8
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 2.6e-98 362.5 245 71.8
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 4.5e-98 361.7 251 70.5
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 7.7e-98 360.9 252 70.2
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 1.7e-97 359.8 212 79.2
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 2.2e-97 359.4 246 69.9
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 3.8e-97 358.6 246 73.2
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 5.0e-97 358.2 249 72.3
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 1.5e-96 356.7 243 73.3
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 4.2e-96 355.1 246 72.0
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 5.5e-96 354.8 249 69.5
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 9.4e-96 354.0 246 72.0
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 1.6e-95 353.2 245 70.2
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 2.1e-95 352.8 248 68.1
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 2.7e-95 352.4 246 71.5
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 8.0e-95 350.9 247 68.4
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 8.0e-95 350.9 263 66.9
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 1.4e-94 350.1 247 69.6
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 1.5e-93 346.7 248 67.7
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 2.0e-93 346.3 239 70.3
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 2.0e-93 346.3 244 69.7
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 3.4e-93 345.5 239 69.5
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 5.7e-93 344.7 246 68.3
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 7.5e-93 344.4 249 68.7
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 9.8e-93 344.0 225 72.4
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 1.3e-92 343.6 255 66.7
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 1.3e-92 343.6 202 78.2
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 1.7e-92 343.2 245 71.4
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 2.2e-92 342.8 246 69.9
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 2.8e-92 342.4 201 78.6
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 2.8e-92 342.4 246 68.7
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 2.8e-92 342.4 240 70.0
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 2.8e-92 342.4 246 68.7
BolC2t08937H Brassica oleracea HOM05D005921 ORTHO05D007374 2.8e-92 342.4 246 68.7
BraA02t06774Z Brassica rapa HOM05D005921 ORTHO05D007374 2.8e-92 342.4 240 70.0
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 4.8e-92 341.7 242 67.4
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 4.8e-92 341.7 246 69.9
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 6.3e-92 341.3 239 69.0
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 6.3e-92 341.3 240 70.0
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 8.3e-92 340.9 246 68.3
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 1.1e-91 340.5 239 70.7
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.4e-91 340.1 267 65.5
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 9.1e-91 337.4 239 68.2
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 1.6e-90 336.7 254 65.0
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 2.7e-90 335.9 254 65.7
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 5.9e-90 334.7 210 75.2
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 7.7e-90 334.3 254 65.4
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 1.0e-89 334.0 222 71.2
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 1.7e-89 333.2 251 65.3
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 2.2e-89 332.8 246 65.9
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 3.8e-89 332.0 227 71.4
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 6.5e-89 331.3 246 68.3
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 1.5e-88 330.1 247 66.4
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 2.5e-88 329.3 252 64.7
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 5.5e-88 328.2 250 66.0
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 1.6e-87 326.6 239 65.3
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 1.6e-87 326.6 184 81.0
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 1.8e-86 323.2 178 82.6
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 2.3e-86 322.8 199 72.9
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 5.2e-86 321.6 251 62.2
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 5.2e-86 321.6 243 61.7
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 6.8e-86 321.2 290 61.0
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 2.0e-85 319.7 191 74.9
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 2.6e-85 319.3 234 67.1
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 9.8e-85 317.4 240 62.5
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 2.2e-84 316.2 281 57.3
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 4.9e-84 315.1 178 80.3
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 1.0e-81 307.4 199 70.9
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.2e-79 300.4 270 59.6
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 1.0e-78 297.4 224 64.7
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 4.0e-78 295.4 261 55.9
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 1.4e-75 287.0 157 82.2
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 1.8e-75 286.6 202 66.8
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 1.2e-74 283.9 291 52.2
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 1.6e-74 283.5 182 74.2
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 5.9e-74 281.6 155 81.3
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 7.8e-74 281.2 191 69.6
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 3.3e-72 275.8 185 69.2
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 7.3e-72 274.6 239 61.1
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 7.3e-72 274.6 243 61.3
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 1.2e-71 273.9 184 69.0
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 2.1e-71 273.1 192 71.4
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 2.1e-71 273.1 161 75.2
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 1.0e-70 270.8 250 56.4
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 1.8e-70 270.0 154 79.2
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 1.5e-69 266.9 181 65.7
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 9.8e-69 264.2 254 57.5
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 1.3e-68 263.8 141 85.1
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 1.7e-68 263.5 177 63.8
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 1.4e-67 260.4 179 65.4
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 8.6e-65 251.1 243 53.9
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 1.1e-62 244.2 286 48.6
Os06g0144600 Oryza sativa ssp. japonica HOM05D005921 ORTHO05D007374 1.2e-61 240.7 193 66.3
Zm00001eb035610 Zea mays HOM05D005921 ORTHO05D007374 8.6e-57 224.6 147 70.7
SEGI_33860 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 3.3e-56 222.6 234 49.6
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 3.9e-49 199.1 179 52.5
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 1.9e-48 196.8 177 56.5
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 5.6e-48 195.3 143 65.0
Zm00001eb246880 Zea mays HOM05D005921 ORTHO05D007374 2.4e-46 189.9 108 77.8
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 3.2e-43 179.5 97 79.4
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 3.8e-36 156.0 233 39.9
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 1.7e-33 147.1 78 80.8
SHI09097 Sapria himalayana HOM05D005921 ORTHO05D007374 5.6e-32 142.1 74 82.4
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 3.1e-30 136.3 148 45.3
Duzib093G1718 Durio zibethinus HOM05D005921 ORTHO05D007374 2.6e-29 133.3 73 79.5
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 2.9e-28 129.8 79 72.2
Cre06.g309450 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 5.5e-19 99.0 209 32.5
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 5.5e-19 99.0 175 37.1
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 1.9e-16 90.5 50 78.0
Pp3c27_7150 Physcomitrium patens HOM05D005921 ORTHO05D007374 1.7e-12 77.4 171 33.9
CBR_g24397 Chara braunii HOM05D005921 ORTHO05D132278 9.7e-08 61.6 78 34.6
Sabra02G0051300 Salix brachista HOM05D005921 ORTHO05D007374 6.3e-07 58.9 35 71.4


User provided reference genes

Program Settings