Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 8.6e-143 510.4 269 100.0
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 3.1e-124 448.7 239 95.8
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 2.2e-61 240.0 284 54.9
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 3.6e-56 222.6 290 47.9
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 1.6e-51 207.2 257 52.1
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 1.1e-36 157.9 282 41.8
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 4.1e-36 156.0 282 41.8
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 7.0e-36 155.2 273 41.8
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 2.7e-35 153.3 280 37.1
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 3.5e-35 152.9 209 47.8
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 5.9e-35 152.1 276 41.7
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 1.1e-33 147.9 284 37.3
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 1.5e-33 147.5 306 38.6
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 1.9e-33 147.1 274 37.6
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 3.2e-33 146.4 278 42.1
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 9.5e-33 144.8 278 38.8
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 2.1e-32 143.7 255 41.2
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 1.0e-31 141.4 284 38.0
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 1.0e-31 141.4 274 41.6
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 3.0e-31 139.8 307 36.2
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 4.0e-31 139.4 286 37.1
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 6.8e-31 138.7 289 39.1
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 8.8e-31 138.3 305 36.4
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 1.2e-30 137.9 305 36.4
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 3.4e-30 136.3 287 38.3
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 5.7e-30 135.6 284 36.6
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 2.2e-29 133.7 285 37.9
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 2.8e-29 133.3 293 34.1
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 4.9e-29 132.5 310 35.8
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 1.4e-28 131.0 277 37.5
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 1.8e-28 130.6 283 39.2
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 3.1e-28 129.8 280 36.1
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 4.1e-28 129.4 322 32.6
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 7.0e-28 128.6 276 36.6
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 7.0e-28 128.6 258 36.4
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 2.7e-27 126.7 289 34.3
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 3.5e-27 126.3 271 37.3
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 5.9e-27 125.6 275 35.6
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 5.9e-27 125.6 278 37.4
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 7.8e-27 125.2 309 35.3
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 2.9e-26 123.2 277 36.1
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 2.9e-26 123.2 271 36.5
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 2.9e-26 123.2 278 35.6
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 2.9e-26 123.2 284 37.3
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 2.9e-26 123.2 294 36.4
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 6.6e-26 122.1 292 35.3
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 2.5e-25 120.2 275 36.0
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 2.5e-25 120.2 256 35.9
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 4.3e-25 119.4 282 34.8
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 5.6e-25 119.0 271 36.5
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 7.3e-25 118.6 307 33.2
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 1.6e-24 117.5 273 33.3
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 1.6e-24 117.5 146 46.6
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 1.6e-24 117.5 312 32.4
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 2.8e-24 116.7 290 34.1
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 3.6e-24 116.3 288 34.0
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 3.6e-24 116.3 287 33.8
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 6.1e-24 115.5 332 33.7
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 6.1e-24 115.5 260 36.2
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 1.0e-23 114.8 259 35.5
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 1.8e-23 114.0 323 35.3
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 6.8e-23 112.1 259 33.6
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 4.4e-22 109.4 288 32.3
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 9.8e-22 108.2 204 40.2
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 1.3e-21 107.8 124 50.0
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 3.7e-21 106.3 147 42.2
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 8.3e-21 105.1 318 30.2
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 1.1e-20 104.8 318 30.2
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 5.4e-20 102.4 152 40.8
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 9.2e-20 101.7 307 31.3
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 1.2e-19 101.3 286 32.5
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 1.2e-19 101.3 273 31.5
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 2.7e-19 100.1 298 31.2
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 1.7e-18 97.4 293 29.4
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 2.3e-18 97.1 126 47.6
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 3.0e-18 96.7 284 30.6
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 3.9e-18 96.3 247 31.6
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 1.5e-17 94.4 126 45.2
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 7.3e-17 92.0 314 30.6
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 1.6e-16 90.9 108 48.1
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 1.6e-16 90.9 120 45.0
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 2.3e-15 87.0 282 30.1
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 2.3e-15 87.0 261 31.0
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 5.2e-15 85.9 120 45.0
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 5.2e-15 85.9 140 41.4
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 2.2e-13 80.5 181 34.3
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 6.4e-13 79.0 242 33.9
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 8.3e-13 78.6 274 29.6
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 1.1e-12 78.2 197 33.0
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 1.4e-12 77.8 145 40.0
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 1.2e-11 74.7 306 25.5
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 1.6e-11 74.3 164 37.2
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 1.9e-09 67.4 129 40.3
AagrBONN_evm.TU.Sc2ySwM_117.786 Anthoceros agrestis HOM05D007372 ORTHO05D009318 5.6e-09 65.9 231 26.0
PGSC0003DMG400025053 Solanum tuberosum HOM05D007372 ORTHO05D009318 8.1e-08 62.0 230 30.9
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 1.1e-07 61.6 103 39.8
FAN20G1411 Fragaria x ananassa HOM05D023021 ORTHO05D025344 3.1e-07 60.1 121 37.2
Mapoly0147s0022 Marchantia polymorpha HOM05D007372 ORTHO05D009318 5.2e-07 59.3 194 28.9
RcHm_v2.0_Chr6g0273881 Rosa chinensis HOM05D023021 ORTHO05D025344 5.2e-07 59.3 95 38.9
FvH4_2g12851 Fragaria vesca HOM05D023021 ORTHO05D025344 8.9e-07 58.5 121 37.2
Ah.05g168300 Amaranthus hybridus HOM05D007372 ORTHO05D009318 2.0e-06 57.4 191 28.3


User provided reference genes

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