Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 2.5e-118 428.7 209 100.0
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 1.3e-32 144.1 133 59.4
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 1.6e-32 143.7 124 61.3
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 4.8e-32 142.1 105 65.7
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 1.4e-31 140.6 120 60.8
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 3.1e-31 139.4 123 59.3
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 4.0e-31 139.0 126 57.1
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 5.3e-31 138.7 100 65.0
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 9.0e-31 137.9 103 65.0
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 1.2e-30 137.5 121 57.0
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 1.5e-30 137.1 130 57.7
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 1.5e-30 137.1 130 56.9
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 2.6e-30 136.3 125 56.8
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 3.4e-30 136.0 95 67.4
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 7.6e-30 134.8 138 52.9
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 7.6e-30 134.8 112 60.7
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 9.9e-30 134.4 96 67.7
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.3e-29 134.0 122 58.2
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 3.8e-29 132.5 123 52.8
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 3.8e-29 132.5 124 54.8
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 3.8e-29 132.5 96 64.6
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 6.4e-29 131.7 102 60.8
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 8.4e-29 131.3 137 51.1
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.1e-28 131.0 97 62.9
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.1e-28 131.0 106 59.4
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 1.1e-28 131.0 89 67.4
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.1e-28 131.0 89 67.4
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 1.4e-28 130.6 118 55.1
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.4e-28 130.6 100 61.0
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 1.4e-28 130.6 100 61.0
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.9e-28 130.2 89 66.3
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 2.4e-28 129.8 120 55.0
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 2.4e-28 129.8 117 60.7
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 3.2e-28 129.4 118 57.6
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 4.2e-28 129.0 112 58.9
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 4.2e-28 129.0 112 56.2
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 5.4e-28 128.6 116 58.6
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 5.4e-28 128.6 116 58.6
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 7.1e-28 128.3 96 65.6
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 7.1e-28 128.3 96 65.6
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 9.3e-28 127.9 108 57.4
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 1.2e-27 127.5 105 58.1
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 1.2e-27 127.5 124 54.8
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 1.2e-27 127.5 132 53.0
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.2e-27 127.5 116 57.8
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 1.2e-27 127.5 117 53.0
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 1.2e-27 127.5 124 54.0
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 1.6e-27 127.1 118 57.6
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.6e-27 127.1 124 54.0
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 2.1e-27 126.7 124 54.0
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 2.1e-27 126.7 114 57.0
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 2.1e-27 126.7 128 51.6
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 2.7e-27 126.3 124 53.2
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.7e-27 126.3 100 60.0
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 3.5e-27 125.9 120 56.7
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 3.5e-27 125.9 123 52.8
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 3.5e-27 125.9 111 58.6
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 4.6e-27 125.6 127 53.5
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 4.6e-27 125.6 118 53.4
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 6.0e-27 125.2 131 55.0
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 6.0e-27 125.2 118 57.6
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 6.0e-27 125.2 96 61.5
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 6.0e-27 125.2 115 54.8
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 6.0e-27 125.2 123 53.7
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 7.9e-27 124.8 118 57.6
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 7.9e-27 124.8 124 52.4
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 1.0e-26 124.4 116 55.2
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.0e-26 124.4 101 59.4
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 1.0e-26 124.4 130 52.3
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.0e-26 124.4 100 59.0
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 1.3e-26 124.0 126 50.0
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.3e-26 124.0 124 50.8
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 1.8e-26 123.6 117 54.7
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 1.8e-26 123.6 113 54.9
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.8e-26 123.6 100 58.0
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 2.3e-26 123.2 128 54.7
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 2.3e-26 123.2 115 53.9
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 2.3e-26 123.2 129 53.5
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 2.3e-26 123.2 114 54.4
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 2.3e-26 123.2 116 56.9
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 3.0e-26 122.9 96 60.4
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 3.0e-26 122.9 118 56.8
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 3.0e-26 122.9 96 60.4
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 3.0e-26 122.9 102 59.8
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 3.0e-26 122.9 131 51.9
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 3.0e-26 122.9 111 58.6
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 3.0e-26 122.9 111 56.8
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 3.0e-26 122.9 89 67.4
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 3.0e-26 122.9 121 55.4
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 3.9e-26 122.5 101 57.4
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 3.9e-26 122.5 126 50.8
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 3.9e-26 122.5 123 53.7
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 6.7e-26 121.7 116 55.2
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 6.7e-26 121.7 114 54.4
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 6.7e-26 121.7 118 55.9
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 6.7e-26 121.7 127 52.0
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 6.7e-26 121.7 127 52.0
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 6.7e-26 121.7 116 55.2
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 6.7e-26 121.7 124 53.2
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 6.7e-26 121.7 124 53.2
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 6.7e-26 121.7 96 61.5
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 8.7e-26 121.3 114 54.4
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.1e-25 120.9 129 51.2
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 1.1e-25 120.9 123 52.0
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 1.5e-25 120.6 129 52.7
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 5.6e-25 118.6 101 60.4
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 9.6e-25 117.9 96 57.3
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 1.3e-24 117.5 116 56.0
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 1.3e-24 117.5 113 54.9
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 1.6e-24 117.1 120 54.2
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 1.4e-23 114.0 92 59.8
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 3.1e-23 112.8 120 53.3
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 1.5e-22 110.5 115 53.0
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 5.8e-22 108.6 111 53.2
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 1.0e-21 107.8 129 45.7
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 1.0e-21 107.8 89 57.3
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 1.7e-21 107.1 105 52.4
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 1.1e-20 104.4 115 50.4
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 4.2e-20 102.4 112 48.2
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.7e-19 99.8 113 48.7
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.7e-19 99.8 113 48.7
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 9.6e-17 91.3 85 51.8
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 1.8e-15 87.0 89 46.1
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 4.0e-15 85.9 90 46.7
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.2e-14 84.3 110 43.6
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 4.3e-09 65.9 51 60.8
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 5.7e-09 65.5 78 48.7
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 8.2e-08 61.6 93 34.4
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 3.1e-07 59.7 40 65.0


User provided reference genes

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