Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p036563 Quercus lobata HOM05D007964 ORTHO05D010090 5.1e-72 274.2 132 100.0
QL02p037092 Quercus lobata HOM05D007964 ORTHO05D010090 7.3e-71 270.4 132 98.5
Cfa018267 Carpinus fangiana HOM05D007964 ORTHO05D010090 2.5e-39 165.6 141 66.0
Haze_17821 Corylus avellana HOM05D007964 ORTHO05D010090 7.4e-39 164.1 141 66.7
CiPaw.15G011700 Carya illinoinensis HOM05D007964 ORTHO05D010090 5.3e-37 157.9 132 65.2
Potri.005G198200 Populus trichocarpa HOM05D007964 ORTHO05D010090 1.9e-34 149.4 139 60.4
CsaV3_6G004920 Cucumis sativus L. HOM05D007964 ORTHO05D010090 7.2e-34 147.5 141 56.0
MELO3C019968.2 Cucumis melo HOM05D007964 ORTHO05D010090 1.2e-33 146.7 142 56.3
Manes.02G184300 Manihot esculenta HOM05D007964 ORTHO05D010090 2.3e-32 142.5 142 56.3
Sabra05G0151100 Salix brachista HOM05D007964 ORTHO05D010090 5.1e-32 141.4 138 60.1
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 1.5e-31 139.8 147 52.4
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 2.5e-31 139.0 132 57.6
Ca_04662_v3 Cicer arietinum L. HOM05D007964 ORTHO05D010090 7.4e-31 137.5 132 58.3
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 1.3e-30 136.7 146 51.4
CSS0037867 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.4e-29 133.3 136 57.4
CSS0006430 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.8e-29 132.9 136 57.4
Phvul.004G087600 Phaseolus vulgaris HOM05D007964 ORTHO05D010090 1.8e-29 132.9 132 56.8
Glyma.02G078400 Glycine max HOM05D007964 ORTHO05D010090 5.3e-29 131.3 132 56.1
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 5.3e-29 131.3 132 56.1
Atru.chr13.1988 Acer truncatum HOM05D007964 ORTHO05D010090 6.9e-29 131.0 138 55.1
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 1.2e-28 130.2 146 49.3
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 1.5e-28 129.8 132 56.8
PGSC0003DMG400025075 Solanum tuberosum HOM05D007964 ORTHO05D010090 1.5e-28 129.8 135 55.6
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 1.5e-28 129.8 139 51.8
Glyma.16G161400 Glycine max HOM05D007964 ORTHO05D010090 2.0e-28 129.4 132 54.5
Hma1.2p1_0678F.1_g202130 Hydrangea macrophylla HOM05D007964 ORTHO05D010090 2.0e-28 129.4 121 58.7
SalBow6G4546 Salvia bowleyana HOM05D007964 ORTHO05D010090 3.4e-28 128.6 132 53.0
FAN20G1166 Fragaria x ananassa HOM05D007964 ORTHO05D010090 1.0e-27 127.1 133 56.4
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 2.9e-27 125.6 141 53.2
RcHm_v2.0_Chr6g0273981 Rosa chinensis HOM05D007964 ORTHO05D010090 5.0e-27 124.8 134 53.0
FvH4_2g12880 Fragaria vesca HOM05D007964 ORTHO05D010090 1.1e-26 123.6 134 55.2
FAN24G2710 Fragaria x ananassa HOM05D007964 ORTHO05D010090 1.1e-26 123.6 134 55.2
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 1.9e-26 122.9 140 52.1
Prupe.8G043200 Prunus persica HOM05D007964 ORTHO05D010090 1.9e-26 122.9 134 56.0
PGR042G2516 Punica granatum HOM05D007964 ORTHO05D010090 2.5e-26 122.5 133 52.6
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 3.2e-26 122.1 140 52.1
FAN27G1192 Fragaria x ananassa HOM05D007964 ORTHO05D010090 3.6e-25 118.6 133 54.1
SGA_v2.0_scaffold54G19690 Striga asiatica HOM05D007964 ORTHO05D010090 4.7e-25 118.2 133 49.6
Aa31LG4G8900 Aethionema arabicum HOM05D007964 ORTHO05D010090 6.1e-25 117.9 141 47.5
Peaxi162Scf00360g00092 Petunia axillaris HOM05D007964 ORTHO05D010090 6.1e-25 117.9 136 52.2
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 1.8e-24 116.3 139 48.9
Potri.002G062950 Populus trichocarpa HOM05D007964 ORTHO05D010090 3.9e-24 115.2 138 50.7
THA.LOC104810508 Tarenaya hassleriana HOM05D007964 ORTHO05D010090 3.9e-24 115.2 120 50.0
Lalb_Chr19g0130001 Lupinus albus HOM05D007964 ORTHO05D010090 1.5e-23 113.2 135 51.1
CAN.G1183.20 Capsicum annuum HOM05D007964 ORTHO05D010090 4.4e-23 111.7 99 56.6
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 9.7e-23 110.5 137 48.2
Rhsim06G0092800 Rhododendron simsii HOM05D007964 ORTHO05D010090 9.7e-23 110.5 125 47.2
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 1.3e-22 110.2 132 48.5
Migut.N02947 Erythranthe guttata HOM05D007964 ORTHO05D010090 2.2e-22 109.4 119 50.4
Migut.O00757 Erythranthe guttata HOM05D007964 ORTHO05D010090 3.7e-22 108.6 118 50.0
CANSAT25G1394 Cannabis sativa HOM05D007964 ORTHO05D010090 6.3e-22 107.8 134 50.0
Nitab4.5_0003443g0080 Nicotiana tabacum HOM05D007964 ORTHO05D010090 6.3e-22 107.8 102 58.8
Nn5g28859 Nelumbo nucifera HOM05D007964 ORTHO05D010090 8.2e-22 107.5 123 53.7
Aqoxy6G00437 Aquilegia oxysepala HOM05D007964 ORTHO05D010090 2.4e-21 105.9 127 51.2
Nitab4.5_0003178g0050 Nicotiana tabacum HOM05D007964 ORTHO05D010090 2.4e-21 105.9 102 56.9
Lsat_1_v5_gn_6_100061 Lactuca sativa HOM05D007964 ORTHO05D010090 6.9e-21 104.4 118 50.8
BolC6t39631H Brassica oleracea HOM05D007964 ORTHO05D010090 9.1e-21 104.0 126 46.8
DCAR_001195 Daucus carota HOM05D007964 ORTHO05D010090 9.1e-21 104.0 99 54.5
Sopen04g028110 Solanum pennellii HOM05D007964 ORTHO05D010090 9.1e-21 104.0 100 56.0
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 1.2e-20 103.6 127 47.2
AT1G71740 Arabidopsis thaliana HOM05D007964 ORTHO05D010090 1.5e-20 103.2 133 45.1
AUR62026621 Chenopodium quinoa HOM05D007964 ORTHO05D010090 2.6e-20 102.4 116 50.9
AUR62034908 Chenopodium quinoa HOM05D007964 ORTHO05D010090 2.6e-20 102.4 132 48.5
AL2G31310 Arabidopsis lyrata HOM05D007964 ORTHO05D010090 4.5e-20 101.7 125 44.0
BraA07t31354Z Brassica rapa HOM05D007964 ORTHO05D010090 5.9e-20 101.3 122 46.7
A07p37890 Brassica napus HOM05D007964 ORTHO05D010090 1.7e-19 99.8 122 45.9
BcaC08g46600 Brassica carinata HOM05D007964 ORTHO05D010090 6.5e-19 97.8 121 44.6
C06p45790 Brassica napus HOM05D007964 ORTHO05D010090 6.5e-19 97.8 121 44.6
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 8.5e-19 97.4 103 53.4
Carub.0002s1850 Capsella rubella HOM05D007964 ORTHO05D010090 8.5e-19 97.4 137 43.8
CARHR291050 Cardamine hirsuta HOM05D007964 ORTHO05D010090 1.9e-18 96.3 114 46.5
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 4.7e-17 91.7 137 40.1
CSS0037942 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 9.7e-15 84.0 62 69.4
Os02g0210900 Oryza sativa ssp. japonica HOM05D007964 ORTHO05D010090 9.1e-13 77.4 108 43.5
ATR1120G014 Amborella trichopoda HOM05D007964 ORTHO05D010090 5.9e-12 74.7 129 36.4
HPP92_000633 Vanilla planifolia HOM05D007964 ORTHO05D010090 1.0e-11 73.9 98 38.8
Zm00001eb205370 Zea mays HOM05D007964 ORTHO05D010090 1.2e-07 60.5 46 60.9
Nn3g17698 Nelumbo nucifera HOM05D002803 ORTHO05D003089 1.5e-07 60.1 52 50.0
Lalb_Chr07g0178561 Lupinus albus HOM05D002803 ORTHO05D003089 5.7e-07 58.2 44 56.8
TAR629G1495 Trochodendron aralioides HOM05D002803 ORTHO05D003089 9.7e-07 57.4 43 53.5
AL1G55870 Arabidopsis lyrata HOM05D002803 ORTHO05D003089 1.7e-06 56.6 52 44.2
unitig_52.g17150 Utricularia gibba HOM05D002803 ORTHO05D003089 1.7e-06 56.6 109 35.8
CiPaw.16G083600 Carya illinoinensis HOM05D002803 ORTHO05D003089 2.2e-06 56.2 42 57.1
THA.LOC104801662 Tarenaya hassleriana HOM05D002803 ORTHO05D003089 2.2e-06 56.2 49 53.1
Actinidia38399 Actinidia chinensis HOM05D002803 ORTHO05D003089 2.8e-06 55.8 43 53.5
CiPaw.16G083500 Carya illinoinensis HOM05D002803 ORTHO05D003089 2.8e-06 55.8 42 57.1
Nn4g23707 Nelumbo nucifera HOM05D002803 ORTHO05D003089 2.8e-06 55.8 43 51.2
Nn4g23709 Nelumbo nucifera HOM05D002803 ORTHO05D003089 2.8e-06 55.8 43 51.2
Sopen06g026510 Solanum pennellii HOM05D002803 ORTHO05D003089 2.8e-06 55.8 53 49.1
CANSAT80G1035 Cannabis sativa HOM05D002803 ORTHO05D003089 3.7e-06 55.5 51 49.0
Sed0004956 Sechium edule HOM05D002803 ORTHO05D003089 3.7e-06 55.5 43 55.8
Prupe.1G304400 Prunus persica HOM05D002803 ORTHO05D003089 4.8e-06 55.1 43 51.2
Sed0021519 Sechium edule HOM05D002803 ORTHO05D003089 4.8e-06 55.1 59 44.1
TAR374G0994 Trochodendron aralioides HOM05D002803 ORTHO05D003089 4.8e-06 55.1 43 51.2
Haze_17431 Corylus avellana HOM05D002803 ORTHO05D003089 6.3e-06 54.7 43 53.5
Dinv16513 Davidia involucrata HOM05D002803 ORTHO05D003089 6.3e-06 54.7 43 51.2
Gohir.A12G265300 Gossypium hirsutum HOM05D002803 ORTHO05D003089 6.3e-06 54.7 54 48.1
Gohir.D12G265500 Gossypium hirsutum HOM05D002803 ORTHO05D003089 6.3e-06 54.7 54 48.1
Gorai.008G285200 Gossypium raimondii HOM05D002803 ORTHO05D003089 6.3e-06 54.7 54 48.1
HanXRQChr02g0042761 Helianthus annuus HOM05D002803 ORTHO05D003089 6.3e-06 54.7 39 59.0
Aa31LG10G4930 Aethionema arabicum HOM05D002803 ORTHO05D003089 8.2e-06 54.3 46 47.8
AT1G49000 Arabidopsis thaliana HOM05D002803 ORTHO05D003089 8.2e-06 54.3 42 50.0
Carub.0001s3818 Capsella rubella HOM05D002803 ORTHO05D003089 8.2e-06 54.3 45 48.9
AUR62032184 Chenopodium quinoa HOM05D002803 ORTHO05D003089 8.2e-06 54.3 51 49.0
AUR62036944 Chenopodium quinoa HOM05D002803 ORTHO05D003089 8.2e-06 54.3 51 49.0
Potri.004G088300 Populus trichocarpa HOM05D008294 ORTHO05D010468 8.2e-06 54.3 137 27.0
TAR622G0697 Trochodendron aralioides HOM05D002803 ORTHO05D003089 8.2e-06 54.3 43 51.2


User provided reference genes

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