Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p036533 Quercus lobata HOM05D007372 ORTHO05D009318 2.7e-153 545.4 297 100.0
QL02p037053 Quercus lobata HOM05D007372 ORTHO05D009318 5.2e-125 451.4 239 95.8
Cfa018264 Carpinus fangiana HOM05D007372 ORTHO05D009318 3.1e-53 213.0 257 53.3
Haze_17824 Corylus avellana HOM05D007372 ORTHO05D009318 1.3e-51 207.6 257 52.1
CiPaw.15G011400 Carya illinoinensis HOM05D007372 ORTHO05D009318 3.7e-46 189.5 263 47.1
Sabra02G0050700 Salix brachista HOM05D007372 ORTHO05D009318 1.0e-32 144.8 250 41.6
MD05G1035800 Malus domestica HOM05D007372 ORTHO05D009318 4.4e-31 139.4 262 42.4
Manes.02G185100 Manihot esculenta HOM05D007372 ORTHO05D009318 7.0e-29 132.1 247 39.7
Psat0ss32450g0040 Pisum sativum HOM05D007372 ORTHO05D009318 2.7e-28 130.2 255 34.9
TAR381G1194 Trochodendron aralioides HOM05D007372 ORTHO05D009318 2.7e-28 130.2 246 35.8
PGR042G0625 Punica granatum HOM05D007372 ORTHO05D009318 4.5e-28 129.4 250 39.2
arahy.Tifrunner.gnm1.ann1.1F4W04 Arachis hypogaea HOM05D007372 ORTHO05D009318 5.9e-28 129.0 252 38.9
arahy.Tifrunner.gnm1.ann1.CL5RXG Arachis hypogaea HOM05D007372 ORTHO05D009318 1.7e-27 127.5 252 38.9
Dinv02471 Davidia involucrata HOM05D007372 ORTHO05D009318 3.8e-27 126.3 176 45.5
Potri.002G062800 Populus trichocarpa HOM05D007372 ORTHO05D009318 8.6e-27 125.2 252 39.7
Rhsim06G0093000 Rhododendron simsii HOM05D007372 ORTHO05D009318 1.1e-26 124.8 295 34.9
Eucgr.F02675 Eucalyptus grandis HOM05D007372 ORTHO05D009318 4.2e-26 122.9 253 36.0
Glyma.02G077500 Glycine max HOM05D007372 ORTHO05D009318 5.5e-26 122.5 246 35.0
Aqoxy6G00438 Aquilegia oxysepala HOM05D007372 ORTHO05D009318 2.1e-25 120.6 257 35.8
Lj2g0008181 Lotus japonicus HOM05D007372 ORTHO05D009318 2.1e-25 120.6 252 34.5
Ca_04659_v3 Cicer arietinum L. HOM05D007372 ORTHO05D009318 2.8e-25 120.2 256 35.9
Nitab4.5_0007403g0010 Nicotiana tabacum HOM05D007372 ORTHO05D009318 3.6e-25 119.8 277 35.4
Sc26g0002770 Simmondsia chinensis HOM05D007372 ORTHO05D009318 1.0e-24 118.2 245 35.9
Gorai.005G076700 Gossypium raimondii HOM05D007372 ORTHO05D009318 4.0e-24 116.3 279 35.1
Gohir.D02G067900 Gossypium hirsutum HOM05D007372 ORTHO05D009318 5.2e-24 115.9 279 35.1
Lalb_Chr19g0129991 Lupinus albus HOM05D007372 ORTHO05D009318 8.9e-24 115.2 252 35.7
TPR.G19684 Trifolium pratense HOM05D007372 ORTHO05D009318 1.2e-23 114.8 252 34.9
Gohir.A02G062200 Gossypium hirsutum HOM05D007372 ORTHO05D009318 1.5e-23 114.4 263 37.6
Duzib093G1977 Durio zibethinus HOM05D007372 ORTHO05D009318 4.4e-23 112.8 282 35.1
VMungo0464G0612 Vigna mungo HOM05D007372 ORTHO05D009318 9.8e-23 111.7 252 34.5
COL.COLO4_24577 Corchorus olitorius HOM05D007372 ORTHO05D009318 1.3e-22 111.3 203 40.4
SalBow7G3614 Salvia bowleyana HOM05D007372 ORTHO05D009318 2.2e-22 110.5 259 33.2
Solyc04g072040.1 Solanum lycopersicum HOM05D007372 ORTHO05D009318 6.3e-22 109.0 259 35.9
Migut.C00154 Erythranthe guttata HOM05D007372 ORTHO05D009318 8.3e-22 108.6 295 30.5
PSO675G2246 Papaver somniferum HOM05D007372 ORTHO05D009318 1.4e-21 107.8 260 31.9
TPR.G19681 Trifolium pratense HOM05D007372 ORTHO05D009318 1.4e-21 107.8 253 33.6
Sopen04g028150 Solanum pennellii HOM05D007372 ORTHO05D009318 2.4e-21 107.1 257 35.0
vmacro22532 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 2.4e-21 107.1 315 29.5
Actinidia17763 Actinidia chinensis HOM05D007372 ORTHO05D009318 4.1e-21 106.3 267 31.5
vmacro22649 Vaccinium macrocarpon HOM05D007372 ORTHO05D009318 4.1e-21 106.3 315 29.5
Sed0016879 Sechium edule HOM05D007372 ORTHO05D009318 7.0e-21 105.5 283 32.5
Nn5g28866 Nelumbo nucifera HOM05D007372 ORTHO05D009318 9.2e-21 105.1 249 33.7
Sp5g26780 Schrenkiella parvula HOM05D007372 ORTHO05D009318 2.0e-20 104.0 262 33.2
Aa31LG4G8880 Aethionema arabicum HOM05D007372 ORTHO05D009318 2.7e-20 103.6 248 33.5
Cpa.g.sc26.120 Carica papaya HOM05D007372 ORTHO05D009318 7.8e-20 102.1 249 35.7
BcaC08g46602 Brassica carinata HOM05D007372 ORTHO05D009318 1.3e-19 101.3 247 34.0
C06p45810 Brassica napus HOM05D007372 ORTHO05D009318 1.3e-19 101.3 246 32.9
Phvul.004G088900 Phaseolus vulgaris HOM05D007372 ORTHO05D009318 1.3e-19 101.3 250 35.2
Lsat_1_v5_gn_9_42440 Lactuca sativa HOM05D007372 ORTHO05D009318 2.9e-19 100.1 227 35.2
Peaxi162Scf00360g00916 Petunia axillaris HOM05D007372 ORTHO05D009318 3.9e-19 99.8 273 31.9
TWI60G0690 Tripterygium wilfordii HOM05D007372 ORTHO05D009318 3.9e-19 99.8 246 34.1
Prupe.8G043800 Prunus persica HOM05D007372 ORTHO05D009318 5.0e-19 99.4 268 34.3
CANSAT25G1084 Cannabis sativa HOM05D007372 ORTHO05D009318 8.6e-19 98.6 253 34.8
ATR1120G103 Amborella trichopoda HOM05D007372 ORTHO05D009318 1.1e-18 98.2 247 31.6
AT1G71760 Arabidopsis thaliana HOM05D007372 ORTHO05D009318 1.9e-18 97.4 244 31.1
BraA07t31356Z Brassica rapa HOM05D007372 ORTHO05D009318 1.9e-18 97.4 246 34.6
PSO541G3596 Papaver somniferum HOM05D007372 ORTHO05D009318 1.9e-18 97.4 283 29.7
Ah.05g168260 Amaranthus hybridus HOM05D007372 ORTHO05D009318 2.5e-18 97.1 283 30.4
A07p37910 Brassica napus HOM05D007372 ORTHO05D009318 4.3e-18 96.3 242 33.9
EL10Ac1g01626 Beta vulgaris HOM05D007372 ORTHO05D009318 7.3e-18 95.5 293 29.0
Nitab4.5_0004252g0050 Nicotiana tabacum HOM05D007372 ORTHO05D009318 9.5e-18 95.1 255 33.7
AL2G31330 Arabidopsis lyrata HOM05D007372 ORTHO05D009318 1.2e-17 94.7 263 31.6
CAN.G1183.23 Capsicum annuum HOM05D007372 ORTHO05D009318 1.2e-17 94.7 282 30.1
ClCG08G007220 Citrullus lanatus HOM05D007372 ORTHO05D009318 1.6e-17 94.4 302 30.8
BolC6t39633H Brassica oleracea HOM05D007372 ORTHO05D009318 2.8e-17 93.6 260 31.2
MELO3C019965.2 Cucumis melo HOM05D007372 ORTHO05D009318 2.8e-17 93.6 294 31.0
THA.LOC104809747 Tarenaya hassleriana HOM05D007372 ORTHO05D009318 3.6e-17 93.2 252 32.5
CsaV3_6G004890 Cucumis sativus L. HOM05D007372 ORTHO05D009318 6.1e-17 92.4 296 32.4
CARHR291030 Cardamine hirsuta HOM05D007372 ORTHO05D009318 1.0e-16 91.7 120 43.3
unitig_46.g18009 Utricularia gibba HOM05D007372 ORTHO05D009318 1.0e-16 91.7 260 30.4
Carub.0002s1852 Capsella rubella HOM05D007372 ORTHO05D009318 1.4e-16 91.3 260 31.2
Cc10_g06440 Coffea canephora HOM05D007372 ORTHO05D009318 2.3e-16 90.5 118 42.4
Hund17499 Selenicereus undatus HOM05D007372 ORTHO05D009318 3.1e-16 90.1 261 31.4
ECA232G4628 Erigeron canadensis HOM05D007372 ORTHO05D009318 3.4e-15 86.7 281 30.2
Thhalv10019840m.g Eutrema salsugineum HOM05D007372 ORTHO05D009318 3.4e-15 86.7 121 40.5
MBI01_g29001_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 5.8e-15 85.9 244 31.1
GSVIVG01013700001 Vitis vinifera HOM05D007372 ORTHO05D009318 7.5e-15 85.5 140 40.7
Psat6g060160 Pisum sativum HOM05D007372 ORTHO05D009318 8.3e-14 82.0 127 37.0
Hma1.2p1_0678F.1_g202150 Hydrangea macrophylla HOM05D007372 ORTHO05D009318 9.2e-13 78.6 93 45.2
FAN24G0386 Fragaria x ananassa HOM05D023021 ORTHO05D025344 2.0e-12 77.4 167 37.1
SGA_v2.0_scaffold82G26208 Striga asiatica HOM05D007372 ORTHO05D009318 7.8e-12 75.5 282 26.6
AUR62034913 Chenopodium quinoa HOM05D007372 ORTHO05D009318 6.6e-11 72.4 271 29.2
MBI01_g42373_MAGBIO Magnolia biondii HOM05D007372 ORTHO05D009318 8.6e-11 72.0 138 39.1
Oeu046069.1 Olea europaea HOM05D007372 ORTHO05D009318 1.9e-10 70.9 274 28.1
RcHm_v2.0_Chr6g0273891 Rosa chinensis HOM05D007372 ORTHO05D009318 4.3e-10 69.7 97 41.2
FvH4_2g12850 Fragaria vesca HOM05D007372 ORTHO05D009318 1.2e-09 68.2 97 41.2
MSTRG.969 Avicennia marina HOM05D007372 ORTHO05D009318 1.6e-09 67.8 81 42.0
HanXRQChr11g0343631 Helianthus annuus HOM05D007372 ORTHO05D009318 3.1e-08 63.5 125 36.0
Medtr0571s0030 Medicago truncatula HOM05D007372 ORTHO05D009318 3.1e-08 63.5 38 73.7
Medtr1191s0010 Medicago truncatula HOM05D007372 ORTHO05D009318 3.1e-08 63.5 90 44.4
FAN20G1411 Fragaria x ananassa HOM05D023021 ORTHO05D025344 3.4e-07 60.1 121 37.2
RcHm_v2.0_Chr6g0273881 Rosa chinensis HOM05D023021 ORTHO05D025344 5.8e-07 59.3 95 38.9
PGSC0003DMG400025053 Solanum tuberosum HOM05D007372 ORTHO05D009318 5.8e-07 59.3 205 29.8
Zm00001eb361480 Zea mays HOM05D007372 ORTHO05D009318 5.8e-07 59.3 155 29.7
Ah.05g168300 Amaranthus hybridus HOM05D007372 ORTHO05D009318 7.5e-07 58.9 191 28.8
FvH4_2g12851 Fragaria vesca HOM05D023021 ORTHO05D025344 9.8e-07 58.5 121 37.2
Os01g0716300 Oryza sativa ssp. japonica HOM05D007372 ORTHO05D009318 1.3e-06 58.2 110 39.1
Ciclev10001857m.g Citrus clementina HOM05D007372 ORTHO05D009318 2.2e-06 57.4 216 31.0
HPP92_004582 Vanilla planifolia HOM05D007372 ORTHO05D009318 8.3e-06 55.5 171 28.1


User provided reference genes

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