Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p036101 Quercus lobata HOM05D004605 ORTHO05D005804 2.4e-74 282.0 132 100.0
QL10p051328 Quercus lobata HOM05D004605 ORTHO05D005804 4.3e-71 271.2 132 96.2
QL10p049039 Quercus lobata HOM05D004605 ORTHO05D005804 2.1e-41 172.6 80 100.0
QL02p065873 Quercus lobata HOM05D004605 ORTHO05D005804 1.1e-34 150.2 146 55.5
QL02p053766 Quercus lobata HOM05D004605 ORTHO05D005804 1.9e-31 139.4 120 60.8
CiPaw.03G083100 Carya illinoinensis HOM05D004605 ORTHO05D005804 4.2e-26 121.7 105 57.1
Atru.chr8.648 Acer truncatum HOM05D004605 ORTHO05D005804 1.4e-24 116.7 116 51.7
Potri.017G100000 Populus trichocarpa HOM05D004605 ORTHO05D005804 3.0e-24 115.5 132 47.7
TWI60G1007 Tripterygium wilfordii HOM05D004605 ORTHO05D005804 3.0e-24 115.5 129 49.6
Sabra17G0086200 Salix brachista HOM05D004605 ORTHO05D005804 3.9e-24 115.2 149 43.6
Dinv33862 Davidia involucrata HOM05D004605 ORTHO05D005804 5.1e-24 114.8 128 47.7
Cfa007695 Carpinus fangiana HOM05D004605 ORTHO05D005804 6.7e-24 114.4 117 52.1
vmacro18128 Vaccinium macrocarpon HOM05D004605 ORTHO05D005804 6.7e-24 114.4 116 50.0
CSS0024904 Camellia sinensis var. sinensis HOM05D004605 ORTHO05D005804 2.0e-23 112.8 117 46.2
Haze_14382 Corylus avellana HOM05D004605 ORTHO05D005804 9.7e-23 110.5 117 51.3
Rhsim08G0077200 Rhododendron simsii HOM05D004605 ORTHO05D005804 9.7e-23 110.5 116 49.1
CiPaw.03G083000 Carya illinoinensis HOM05D004605 ORTHO05D005804 1.7e-22 109.8 120 46.7
Manes.01G103400 Manihot esculenta HOM05D004605 ORTHO05D005804 2.2e-22 109.4 116 49.1
Cpa.g.sc14.228 Carica papaya HOM05D004605 ORTHO05D005804 3.7e-22 108.6 135 43.7
Lju361C6G5 Lonicera japonica HOM05D004605 ORTHO05D005804 4.8e-22 108.2 116 47.4
GSVIVG01036547001 Vitis vinifera HOM05D004605 ORTHO05D005804 8.2e-22 107.5 136 43.4
Ciclev10012619m.g Citrus clementina HOM05D004605 ORTHO05D005804 1.1e-21 107.1 140 45.0
Actinidia26268 Actinidia chinensis HOM05D004605 ORTHO05D005804 1.8e-21 106.3 116 46.6
TAR629G2115 Trochodendron aralioides HOM05D004605 ORTHO05D005804 1.8e-21 106.3 116 47.4
COL.COLO4_10258 Corchorus olitorius HOM05D004605 ORTHO05D005804 2.4e-21 105.9 115 47.0
Prupe.3G249100 Prunus persica HOM05D004605 ORTHO05D005804 2.4e-21 105.9 113 49.6
Thecc.04G106100 Theobroma cacao HOM05D004605 ORTHO05D005804 5.3e-21 104.8 116 46.6
MBI16_g34534_MAGBIO Magnolia biondii HOM05D004605 ORTHO05D005804 6.9e-21 104.4 124 44.4
Manes.02G059400 Manihot esculenta HOM05D004605 ORTHO05D005804 6.9e-21 104.4 116 46.6
Hma1.2p1_0474F.1_g160750 Hydrangea macrophylla HOM05D004605 ORTHO05D005804 9.1e-21 104.0 116 49.1
Peaxi162Scf00020g10235 Petunia axillaris HOM05D004605 ORTHO05D005804 9.1e-21 104.0 115 47.0
Duzib138G1714 Durio zibethinus HOM05D004605 ORTHO05D005804 1.2e-20 103.6 120 44.2
AUR62024435 Chenopodium quinoa HOM05D004605 ORTHO05D005804 2.0e-20 102.8 118 45.8
Gohir.A07G179800 Gossypium hirsutum HOM05D004605 ORTHO05D005804 2.0e-20 102.8 116 45.7
FvH4_6g46390 Fragaria vesca HOM05D004605 ORTHO05D005804 3.4e-20 102.1 119 45.4
FAN02G3403 Fragaria x ananassa HOM05D004605 ORTHO05D005804 3.4e-20 102.1 119 45.4
FAN14G2038 Fragaria x ananassa HOM05D004605 ORTHO05D005804 3.4e-20 102.1 119 45.4
Medtr7g016650 Medicago truncatula HOM05D004605 ORTHO05D005804 3.4e-20 102.1 128 44.5
MELO3C026298.2 Cucumis melo HOM05D004605 ORTHO05D005804 4.5e-20 101.7 117 47.9
CsaV3_4G010080 Cucumis sativus L. HOM05D004605 ORTHO05D005804 4.5e-20 101.7 127 45.7
Gohir.D07G186600 Gossypium hirsutum HOM05D004605 ORTHO05D005804 4.5e-20 101.7 116 44.8
Gorai.001G207200 Gossypium raimondii HOM05D004605 ORTHO05D005804 4.5e-20 101.7 116 44.8
BraA07t29690Z Brassica rapa HOM05D004605 ORTHO05D005804 5.9e-20 101.3 116 46.6
BcaB02g07994 Brassica carinata HOM05D004605 ORTHO05D005804 7.7e-20 100.9 116 45.7
CANSAT64G2231 Cannabis sativa HOM05D004605 ORTHO05D005804 7.7e-20 100.9 114 48.2
FAN05G4053 Fragaria x ananassa HOM05D004605 ORTHO05D005804 7.7e-20 100.9 114 45.6
Cc07_g04470 Coffea canephora HOM05D004605 ORTHO05D005804 1.0e-19 100.5 116 43.1
Lalb_Chr10g0092731 Lupinus albus HOM05D004605 ORTHO05D005804 1.0e-19 100.5 115 47.0
A07p19860 Brassica napus HOM05D004605 ORTHO05D005804 1.3e-19 100.1 116 45.7
ClCG07G016040 Citrullus lanatus HOM05D004605 ORTHO05D005804 1.3e-19 100.1 127 44.9
Duzib133G0947 Durio zibethinus HOM05D004605 ORTHO05D005804 1.3e-19 100.1 132 41.7
RcHm_v2.0_Chr2g0164921 Rosa chinensis HOM05D004605 ORTHO05D005804 1.3e-19 100.1 119 44.5
DCAR_021425 Daucus carota HOM05D004605 ORTHO05D005804 1.7e-19 99.8 116 44.8
Nitab4.5_0007530g0010 Nicotiana tabacum HOM05D004605 ORTHO05D005804 1.7e-19 99.8 116 44.8
Carub.0007s3694 Capsella rubella HOM05D004605 ORTHO05D005804 2.2e-19 99.4 125 41.6
Aa31LG9G16810 Aethionema arabicum HOM05D004605 ORTHO05D005804 2.9e-19 99.0 111 48.6
CAN.G497.71 Capsicum annuum HOM05D004605 ORTHO05D005804 2.9e-19 99.0 114 45.6
PGSC0003DMG400001379 Solanum tuberosum HOM05D004605 ORTHO05D005804 2.9e-19 99.0 114 45.6
arahy.Tifrunner.gnm1.ann1.90K79T Arachis hypogaea HOM05D004605 ORTHO05D005804 3.8e-19 98.6 112 44.6
arahy.Tifrunner.gnm1.ann1.M6S7AL Arachis hypogaea HOM05D004605 ORTHO05D005804 3.8e-19 98.6 112 44.6
BcaC08g44406 Brassica carinata HOM05D004605 ORTHO05D005804 3.8e-19 98.6 116 45.7
C06p18440 Brassica napus HOM05D004605 ORTHO05D005804 3.8e-19 98.6 116 45.7
BolC6t37056H Brassica oleracea HOM05D004605 ORTHO05D005804 3.8e-19 98.6 116 45.7
Sed0020846 Sechium edule HOM05D004605 ORTHO05D005804 5.0e-19 98.2 126 43.7
Glyma.18G273900 Glycine max HOM05D004605 ORTHO05D005804 8.5e-19 97.4 114 44.7
Nitab4.5_0001339g0150 Nicotiana tabacum HOM05D004605 ORTHO05D005804 8.5e-19 97.4 115 44.3
Sopen02g034020 Solanum pennellii HOM05D004605 ORTHO05D005804 8.5e-19 97.4 114 44.7
HanXRQChr14g0452481 Helianthus annuus HOM05D004605 ORTHO05D005804 1.1e-18 97.1 127 41.7
PSO675G6317 Papaver somniferum HOM05D004605 ORTHO05D005804 1.1e-18 97.1 113 46.0
Sp7g03000 Schrenkiella parvula HOM05D004605 ORTHO05D005804 1.1e-18 97.1 116 43.1
AT5G38900 Arabidopsis thaliana HOM05D004605 ORTHO05D005804 1.4e-18 96.7 116 43.1
ECA238G2860 Erigeron canadensis HOM05D004605 ORTHO05D005804 1.4e-18 96.7 115 44.3
Thhalv10027927m.g Eutrema salsugineum HOM05D004605 ORTHO05D005804 1.4e-18 96.7 116 44.8
SGA_v2.0_scaffold148G36445 Striga asiatica HOM05D004605 ORTHO05D005804 1.4e-18 96.7 115 44.3
Lj1g0025970 Lotus japonicus HOM05D004605 ORTHO05D005804 1.9e-18 96.3 109 47.7
Oeu031839.1 Olea europaea HOM05D004605 ORTHO05D005804 1.9e-18 96.3 116 43.1
Phvul.008G027600 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 3.2e-18 95.5 114 43.9
Sc10g0000600 Simmondsia chinensis HOM05D004605 ORTHO05D005804 3.2e-18 95.5 116 44.8
VMungo1383G2960 Vigna mungo HOM05D004605 ORTHO05D005804 3.2e-18 95.5 114 43.9
Glyma.08G251200 Glycine max HOM05D004605 ORTHO05D005804 4.2e-18 95.1 110 46.4
MD17G1065700 Malus domestica HOM05D004605 ORTHO05D005804 4.2e-18 95.1 113 45.1
Solyc02g089230.3 Solanum lycopersicum HOM05D004605 ORTHO05D005804 5.5e-18 94.7 114 43.9
AL7G51520 Arabidopsis lyrata HOM05D004605 ORTHO05D005804 7.2e-18 94.4 116 41.4
CARHR263630 Cardamine hirsuta HOM05D004605 ORTHO05D005804 7.2e-18 94.4 108 45.4
PSO732G0027 Papaver somniferum HOM05D004605 ORTHO05D005804 7.2e-18 94.4 113 45.1
Phvul.008G027000 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 7.2e-18 94.4 114 42.1
Aqoxy3G03715 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.2e-17 93.6 108 43.5
Psat3g203400 Pisum sativum HOM05D004605 ORTHO05D005804 1.2e-17 93.6 116 43.1
Ca_06902_v3 Cicer arietinum L. HOM05D004605 ORTHO05D005804 1.6e-17 93.2 111 44.1
MSTRG.15437 Avicennia marina HOM05D004605 ORTHO05D005804 2.1e-17 92.8 112 42.9
THA.LOC104805526 Tarenaya hassleriana HOM05D004605 ORTHO05D005804 2.7e-17 92.4 111 42.3
Migut.H00587 Erythranthe guttata HOM05D004605 ORTHO05D005804 3.6e-17 92.0 119 39.5
MD09G1074300 Malus domestica HOM05D004605 ORTHO05D005804 3.6e-17 92.0 108 45.4
Phvul.008G026800 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 3.6e-17 92.0 114 42.1
SalBow1G3999 Salvia bowleyana HOM05D004605 ORTHO05D005804 8.0e-17 90.9 115 42.6
TPR.G23408 Trifolium pratense HOM05D004605 ORTHO05D005804 1.0e-16 90.5 111 42.3
Zm00001eb219300 Zea mays HOM05D004605 ORTHO05D005804 1.0e-16 90.5 116 41.4
Eucgr.I02062 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.4e-16 90.1 146 37.0
Hund16233 Selenicereus undatus HOM05D004605 ORTHO05D005804 1.4e-16 90.1 116 43.1
Aqoxy3G03714 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.8e-16 89.7 110 43.6
EL10Ac2g04442 Beta vulgaris HOM05D004605 ORTHO05D005804 1.8e-16 89.7 112 42.0
Os03g0598900 Oryza sativa ssp. japonica HOM05D004605 ORTHO05D005804 1.8e-16 89.7 114 41.2
VMungo1383G3490 Vigna mungo HOM05D004605 ORTHO05D005804 3.0e-16 89.0 114 40.4
MSTRG.15436 Avicennia marina HOM05D004605 ORTHO05D005804 6.7e-16 87.8 111 40.5
ATR0827G055 Amborella trichopoda HOM05D004605 ORTHO05D005804 2.0e-15 86.3 123 38.2
Aqoxy3G03716 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 2.0e-15 86.3 108 41.7
Lsat_1_v5_gn_2_90241 Lactuca sativa HOM05D004605 ORTHO05D005804 2.0e-15 86.3 112 41.1
Zm00001eb049940 Zea mays HOM05D004605 ORTHO05D005804 2.0e-15 86.3 114 41.2
HPP92_012260 Vanilla planifolia HOM05D004605 ORTHO05D005804 5.7e-15 84.7 138 37.7
Eucgr.L00305 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.7e-14 83.2 97 44.3
SMO223G0030 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 2.8e-14 82.4 110 39.1
AUR62023160 Chenopodium quinoa HOM05D004605 ORTHO05D005804 3.7e-14 82.0 98 45.9
Prupe.3G249000 Prunus persica HOM05D004605 ORTHO05D005804 2.4e-13 79.3 110 35.5
AagrBONN_evm.TU.Sc2ySwM_340.409 Anthoceros agrestis HOM05D004605 ORTHO05D005804 3.1e-13 79.0 108 38.0
PSO591G0315 Papaver somniferum HOM05D004605 ORTHO05D005804 1.6e-12 76.6 45 73.3
Nn1g08577 Nelumbo nucifera HOM05D004605 ORTHO05D005804 7.7e-12 74.3 66 53.0
Mapoly0001s0057 Marchantia polymorpha HOM05D004605 ORTHO05D005804 1.7e-11 73.2 109 36.7
Pp3c14_20450 Physcomitrium patens HOM05D004605 ORTHO05D005804 2.9e-11 72.4 109 35.8
BolC3t14639H Brassica oleracea HOM05D004605 ORTHO05D005804 3.8e-11 72.0 47 66.0
arahy.Tifrunner.gnm1.ann1.XASR8W Arachis hypogaea HOM05D004605 ORTHO05D005804 5.0e-11 71.6 92 40.2
Nn1g08580 Nelumbo nucifera HOM05D004605 ORTHO05D005804 5.5e-10 68.2 66 50.0
AUR62009481 Chenopodium quinoa HOM05D004605 ORTHO05D005804 1.2e-09 67.0 43 65.1
SEGI_21234 Sequoiadendron giganteum HOM05D004605 ORTHO05D005804 3.6e-09 65.5 129 31.0
FAN09G1153 Fragaria x ananassa HOM05D004605 ORTHO05D005804 6.1e-09 64.7 93 39.8
Eucgr.L00721 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.8e-08 63.2 82 42.7
Cre12.g553700 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 2.3e-08 62.8 107 33.6
RcHm_v2.0_Chr2g0164911 Rosa chinensis HOM05D004605 ORTHO05D005804 5.7e-07 58.2 113 32.7
Eucgr.B03744 Eucalyptus grandis HOM05D004605 ORTHO05D005804 9.7e-07 57.4 29 75.9
FAN09G3310 Fragaria x ananassa HOM05D004605 ORTHO05D005804 3.7e-06 55.5 112 32.1
FvH4_6g46370 Fragaria vesca HOM05D004605 ORTHO05D005804 4.8e-06 55.1 112 32.1


User provided reference genes

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