Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p033236 Quercus lobata HOM05D006267 ORTHO05D007490 0.0e+00 1315.1 669 100.0
Cfa012253 Carpinus fangiana HOM05D006267 ORTHO05D007490 1.6e-262 909.4 701 71.2
CiPaw.12G088700 Carya illinoinensis HOM05D006267 ORTHO05D007490 2.9e-192 676.0 590 63.7
Haze_08744 Corylus avellana HOM05D006267 ORTHO05D007490 1.1e-183 647.5 703 56.0
COL.COLO4_08352 Corchorus olitorius HOM05D006267 ORTHO05D007490 5.7e-180 635.2 680 53.7
Thecc.03G287200 Theobroma cacao HOM05D006267 ORTHO05D007490 1.7e-179 633.6 685 54.7
Dinv37589 Davidia involucrata HOM05D006267 ORTHO05D007490 4.5e-177 625.5 702 52.0
Prupe.5G107200 Prunus persica HOM05D006267 ORTHO05D007490 8.6e-176 621.3 571 59.2
GSVIVG01019426001 Vitis vinifera HOM05D006267 ORTHO05D007490 1.1e-175 620.9 706 53.1
MD14G1113000 Malus domestica HOM05D006267 ORTHO05D007490 5.2e-173 612.1 697 51.4
MD06G1092500 Malus domestica HOM05D006267 ORTHO05D007490 7.0e-170 601.7 697 51.1
RcHm_v2.0_Chr7g0196491 Rosa chinensis HOM05D006267 ORTHO05D007490 3.0e-168 596.3 695 51.1
Duzib084G0031 Durio zibethinus HOM05D006267 ORTHO05D007490 1.3e-163 580.9 667 52.3
Dinv38895 Davidia involucrata HOM05D006267 ORTHO05D007490 1.7e-163 580.5 622 53.7
Ciclev10019222m.g Citrus clementina HOM05D006267 ORTHO05D007490 4.6e-161 572.4 694 50.3
Atru.chr9.2105 Acer truncatum HOM05D006267 ORTHO05D007490 5.0e-160 568.9 686 51.2
FvH4_5g03290 Fragaria vesca HOM05D006267 ORTHO05D007490 5.6e-159 565.5 648 51.7
Duzib205G1874 Durio zibethinus HOM05D006267 ORTHO05D007490 1.2e-158 564.3 679 51.0
Glyma.08G018700 Glycine max HOM05D006267 ORTHO05D007490 1.8e-157 560.5 681 48.3
CANSAT21G1484 Cannabis sativa HOM05D006267 ORTHO05D007490 2.6e-156 556.6 701 51.9
FAN08G1104 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.7e-155 553.9 670 50.4
Glyma.05G212200 Glycine max HOM05D006267 ORTHO05D007490 2.9e-155 553.1 681 48.0
FAN18G3550 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.9e-154 550.4 646 50.9
Manes.01G056900 Manihot esculenta HOM05D006267 ORTHO05D007490 4.1e-154 549.3 683 49.5
FAN13G1859 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.3e-152 543.5 671 49.9
FAN04G2714 Fragaria x ananassa HOM05D006267 ORTHO05D007490 2.5e-151 540.0 661 49.9
VMungo0251G1048 Vigna mungo HOM05D006267 ORTHO05D007490 4.3e-151 539.3 685 47.4
ClCG07G007820 Citrullus lanatus HOM05D006267 ORTHO05D007490 5.6e-151 538.9 683 49.2
FAN04G3088 Fragaria x ananassa HOM05D006267 ORTHO05D007490 1.8e-149 533.9 685 48.6
FAN13G1356 Fragaria x ananassa HOM05D006267 ORTHO05D007490 6.8e-149 531.9 671 49.5
Lj4g0011337 Lotus japonicus HOM05D006267 ORTHO05D007490 4.4e-148 529.3 688 46.7
Potri.001G098500 Populus trichocarpa HOM05D006267 ORTHO05D007490 4.4e-148 529.3 640 50.5
CSS0029775 Camellia sinensis var. sinensis HOM05D006267 ORTHO05D007490 3.8e-147 526.2 710 47.6
Potri.003G133100 Populus trichocarpa HOM05D006267 ORTHO05D007490 6.0e-145 518.8 644 49.5
Phvul.002G293500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 1.0e-144 518.1 683 46.7
Gohir.D11G022800 Gossypium hirsutum HOM05D006267 ORTHO05D007490 2.1e-142 510.4 604 51.2
CsaV3_4G006140 Cucumis sativus L. HOM05D006267 ORTHO05D007490 1.4e-141 507.7 696 47.6
Ca_10954_v3 Cicer arietinum L. HOM05D006267 ORTHO05D007490 1.8e-141 507.3 617 48.0
Gorai.007G024600 Gossypium raimondii HOM05D006267 ORTHO05D007490 5.2e-141 505.8 604 51.0
Lalb_Chr05g0224451 Lupinus albus HOM05D006267 ORTHO05D007490 7.6e-140 501.9 682 45.0
Gohir.A11G023100 Gossypium hirsutum HOM05D006267 ORTHO05D007490 1.7e-139 500.7 604 51.0
Actinidia33723 Actinidia chinensis HOM05D006267 ORTHO05D007490 6.4e-139 498.8 664 46.5
arahy.Tifrunner.gnm1.ann1.BRCM5A Arachis hypogaea HOM05D006267 ORTHO05D007490 6.4e-139 498.8 683 45.2
Cpa.g.sc201.8 Carica papaya HOM05D006267 ORTHO05D007490 1.4e-138 497.7 677 47.4
arahy.Tifrunner.gnm1.ann1.SWZD22 Arachis hypogaea HOM05D006267 ORTHO05D007490 1.9e-138 497.3 683 45.1
Lalb_Chr09g0333071 Lupinus albus HOM05D006267 ORTHO05D007490 3.2e-138 496.5 684 45.9
Sed0011828 Sechium edule HOM05D006267 ORTHO05D007490 2.3e-136 490.3 675 46.7
Medtr8g098995 Medicago truncatula HOM05D006267 ORTHO05D007490 3.0e-136 490.0 629 45.5
TPR.G12935 Trifolium pratense HOM05D006267 ORTHO05D007490 2.5e-135 486.9 676 43.9
Manes.02G016400 Manihot esculenta HOM05D006267 ORTHO05D007490 7.3e-135 485.3 541 53.8
MELO3C016335.2 Cucumis melo HOM05D006267 ORTHO05D007490 6.2e-134 482.3 689 47.0
TAR629G1352 Trochodendron aralioides HOM05D006267 ORTHO05D007490 4.0e-133 479.6 656 46.0
Sabra03G0095400 Salix brachista HOM05D006267 ORTHO05D007490 2.6e-132 476.9 641 47.0
Psat7g029320 Pisum sativum HOM05D006267 ORTHO05D007490 1.3e-131 474.6 634 45.4
Hma1.2p1_0216F.1_g091140 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.9e-130 470.7 608 48.0
Sabra01G0073800 Salix brachista HOM05D006267 ORTHO05D007490 1.2e-129 468.0 643 45.9
Lj2A177G41 Lonicera japonica HOM05D006267 ORTHO05D007490 3.9e-128 463.0 716 44.6
Actinidia27358 Actinidia chinensis HOM05D006267 ORTHO05D007490 8.7e-128 461.8 627 45.6
Duzib068G0865 Durio zibethinus HOM05D006267 ORTHO05D007490 3.5e-121 439.9 693 43.3
AUR62010761 Chenopodium quinoa HOM05D006267 ORTHO05D007490 3.3e-119 433.3 711 41.5
EL10Ac5g12844 Beta vulgaris HOM05D006267 ORTHO05D007490 1.8e-117 427.6 698 41.1
TAR374G1011 Trochodendron aralioides HOM05D006267 ORTHO05D007490 1.6e-113 414.5 790 38.6
VMungo1215G1298 Vigna mungo HOM05D006267 ORTHO05D007490 2.3e-112 410.6 620 41.6
Nn1g01698 Nelumbo nucifera HOM05D006267 ORTHO05D007490 3.9e-112 409.8 724 40.5
Sed0002932 Sechium edule HOM05D006267 ORTHO05D007490 3.9e-112 409.8 518 48.5
Phvul.002G160500 Phaseolus vulgaris HOM05D006267 ORTHO05D007490 4.1e-109 399.8 625 41.0
TAR375G0718 Trochodendron aralioides HOM05D006267 ORTHO05D007490 5.9e-108 396.0 628 40.6
Eucgr.E00783 Eucalyptus grandis HOM05D006267 ORTHO05D007490 2.5e-106 390.6 616 41.9
PGR042G1146 Punica granatum HOM05D006267 ORTHO05D007490 1.2e-105 388.3 704 40.5
AUR62019762 Chenopodium quinoa HOM05D006267 ORTHO05D007490 2.1e-105 387.5 664 40.5
Cc08_g15330 Coffea canephora HOM05D006267 ORTHO05D007490 1.1e-103 381.7 544 42.6
Hund14261 Selenicereus undatus HOM05D006267 ORTHO05D007490 2.5e-103 380.6 671 39.9
Sc01g0009910 Simmondsia chinensis HOM05D006267 ORTHO05D007490 7.4e-103 379.0 694 38.3
TWI60G1512 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 1.4e-101 374.8 439 51.7
vmacro13979 Vaccinium macrocarpon HOM05D006267 ORTHO05D007490 2.1e-97 360.9 718 36.8
Nitab4.5_0002381g0070 Nicotiana tabacum HOM05D006267 ORTHO05D007490 2.6e-95 354.0 656 39.2
TWI81G0535 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 3.1e-93 347.1 434 47.9
TWI15G0222 Tripterygium wilfordii HOM05D006267 ORTHO05D007490 5.9e-92 342.8 442 48.2
Rhsim07G0086900 Rhododendron simsii HOM05D006267 ORTHO05D007490 3.8e-91 340.1 583 41.3
Hund11430 Selenicereus undatus HOM05D006267 ORTHO05D007490 3.8e-91 340.1 751 36.0
Nitab4.5_0003366g0020 Nicotiana tabacum HOM05D006267 ORTHO05D007490 2.7e-89 334.0 660 39.4
Peaxi162Scf00117g01519 Petunia axillaris HOM05D006267 ORTHO05D007490 1.4e-85 321.6 570 39.3
Aqoxy7G00177 Aquilegia oxysepala HOM05D006267 ORTHO05D007490 7.7e-84 315.8 643 39.0
ECA246G3109 Erigeron canadensis HOM05D006267 ORTHO05D007490 5.5e-82 309.7 638 39.0
HanXRQChr17g0533871 Helianthus annuus HOM05D006267 ORTHO05D007490 2.0e-79 301.2 694 36.6
Sp2g00660 Schrenkiella parvula HOM05D006267 ORTHO05D007490 1.3e-78 298.5 589 38.5
THA.LOC104817764 Tarenaya hassleriana HOM05D006267 ORTHO05D007490 2.2e-78 297.7 648 38.0
Lsat_1_v5_gn_3_11600 Lactuca sativa HOM05D006267 ORTHO05D007490 3.7e-78 297.0 698 37.1
Sopen12g028680 Solanum pennellii HOM05D006267 ORTHO05D007490 6.3e-78 296.2 679 36.4
CiPaw.11G129100 Carya illinoinensis HOM05D006267 ORTHO05D007490 3.1e-77 293.9 232 67.2
CARHR046900 Cardamine hirsuta HOM05D006267 ORTHO05D007490 9.1e-77 292.4 708 36.4
Thhalv10023327m.g Eutrema salsugineum HOM05D006267 ORTHO05D007490 2.7e-76 290.8 630 37.3
MSTRG.1836 Avicennia marina HOM05D006267 ORTHO05D007490 1.3e-75 288.5 663 36.5
MSTRG.13864 Avicennia marina HOM05D006267 ORTHO05D007490 2.2e-75 287.7 523 39.4
Solyc12g056170.2 Solanum lycopersicum HOM05D006267 ORTHO05D007490 1.5e-74 285.0 679 35.9
Carub.0002s0075 Capsella rubella HOM05D006267 ORTHO05D007490 7.2e-74 282.7 637 36.1
DCAR_005575 Daucus carota HOM05D006267 ORTHO05D007490 1.6e-73 281.6 571 35.7
AL2G11010 Arabidopsis lyrata HOM05D006267 ORTHO05D007490 4.7e-73 280.0 638 35.9
Migut.E01211 Erythranthe guttata HOM05D006267 ORTHO05D007490 3.0e-72 277.3 672 36.6
PGSC0003DMG400004984 Solanum tuberosum HOM05D006267 ORTHO05D007490 1.5e-71 275.0 732 33.5
BcaB07g31428 Brassica carinata HOM05D006267 ORTHO05D007490 3.1e-69 267.3 582 37.1
SGA_v2.0_scaffold111G31467 Striga asiatica HOM05D006267 ORTHO05D007490 1.2e-68 265.4 646 33.9
AT1G64050 Arabidopsis thaliana HOM05D006267 ORTHO05D007490 2.0e-68 264.6 644 35.9
A09p15090 Brassica napus HOM05D006267 ORTHO05D007490 1.5e-66 258.5 580 36.9
BolC9t54717H Brassica oleracea HOM05D006267 ORTHO05D007490 9.5e-66 255.8 630 35.9
BraA09t37153Z Brassica rapa HOM05D006267 ORTHO05D007490 9.5e-66 255.8 581 36.8
BcaC04g22526 Brassica carinata HOM05D006267 ORTHO05D007490 1.6e-65 255.0 630 36.0
C09p18210 Brassica napus HOM05D006267 ORTHO05D007490 6.1e-65 253.1 630 35.7
Aa31LG2G1120 Aethionema arabicum HOM05D006267 ORTHO05D007490 7.5e-63 246.1 541 37.9
MBI04_g06288_MAGBIO Magnolia biondii HOM05D006267 ORTHO05D007490 7.5e-63 246.1 777 31.3
PSO063G3925 Papaver somniferum HOM05D006267 ORTHO05D007490 1.1e-50 205.7 627 32.5
PSO170G4156 Papaver somniferum HOM05D006267 ORTHO05D007490 3.3e-50 204.1 623 32.4
Zm00001eb237760 Zea mays HOM05D006267 ORTHO05D007490 1.5e-31 142.1 693 25.0
SHI07081 Sapria himalayana HOM05D006267 ORTHO05D007490 3.2e-29 134.4 334 32.0
unitig_52.g17233 Utricularia gibba HOM05D006267 ORTHO05D007490 1.5e-26 125.6 427 29.7
HPP92_003940 Vanilla planifolia HOM05D006267 ORTHO05D007490 1.5e-26 125.6 458 27.5
HanXRQChr06g0166231 Helianthus annuus HOM05D006267 ORTHO05D007490 2.5e-26 124.8 233 38.6
ATR0188G022 Amborella trichopoda HOM05D006267 ORTHO05D007490 5.4e-21 107.1 260 33.5
CiPaw.11G129200 Carya illinoinensis HOM05D006267 ORTHO05D007490 4.8e-17 94.0 81 59.3
CDE03G0464 Ceratophyllum demersum HOM05D000575 ORTHO05D004448 3.1e-16 91.3 533 27.0
MSTRG.11952 Avicennia marina HOM05D006267 ORTHO05D007490 7.9e-12 76.6 170 32.9
Zm00001eb203960 Zea mays HOM05D006267 ORTHO05D007490 1.1e-10 72.8 312 26.3
Hma1.2p1_0377F.1_g139590 Hydrangea macrophylla HOM05D006267 ORTHO05D007490 1.5e-10 72.4 124 41.9
Psat0s1200g0040 Pisum sativum HOM05D005109 ORTHO05D006084 1.4e-08 65.9 104 42.3
HPP92_023938 Vanilla planifolia HOM05D006267 ORTHO05D007490 2.2e-06 58.5 207 28.5
HPP92_023960 Vanilla planifolia HOM05D006267 ORTHO05D007490 3.8e-06 57.8 207 28.5


User provided reference genes

Program Settings