Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 6.1e-208 727.2 367 100.0
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 1.8e-175 619.4 368 85.1
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 3.0e-162 575.5 362 79.3
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 8.1e-160 567.4 368 79.3
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 2.9e-157 558.9 396 71.0
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 5.4e-156 554.7 361 75.9
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 1.6e-155 553.1 361 75.6
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.1e-155 552.7 361 74.8
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 7.8e-155 550.8 369 72.6
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 7.8e-155 550.8 361 74.5
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 2.3e-154 549.3 365 73.2
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 5.1e-154 548.1 358 76.3
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 8.6e-154 547.4 358 74.9
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 2.3e-151 539.3 360 74.7
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 4.0e-151 538.5 352 75.6
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 8.9e-151 537.3 359 74.4
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 3.4e-150 535.4 357 73.7
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 9.9e-150 533.9 361 73.4
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 8.4e-149 530.8 361 72.9
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 5.4e-148 528.1 361 70.6
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 1.6e-147 526.6 362 70.4
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 3.0e-146 522.3 361 70.4
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 6.6e-146 521.2 362 69.9
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 1.1e-145 520.4 362 70.4
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 1.5e-145 520.0 362 72.7
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 1.9e-145 519.6 366 68.6
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 3.6e-144 515.4 362 70.2
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 4.7e-144 515.0 363 69.7
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 4.7e-144 515.0 363 69.7
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 4.7e-144 515.0 363 69.7
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 1.1e-143 513.8 366 69.7
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 2.4e-143 512.7 354 71.8
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.1e-143 512.3 361 69.0
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 3.1e-143 512.3 354 70.9
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 5.2e-143 511.5 366 69.9
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 6.9e-143 511.1 361 70.1
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 8.9e-143 510.8 349 70.5
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 4.9e-141 505.0 360 70.3
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 6.4e-141 504.6 355 70.4
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 8.4e-141 504.2 355 69.9
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 1.4e-140 503.4 358 67.3
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 3.2e-140 502.3 352 68.5
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 7.1e-140 501.1 350 71.1
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 7.1e-140 501.1 350 70.9
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 9.3e-140 500.7 355 69.6
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 1.2e-139 500.4 363 68.3
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 1.6e-139 500.0 360 69.7
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 3.5e-139 498.8 363 68.0
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 4.6e-139 498.4 363 67.5
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.3e-138 496.1 350 70.0
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 3.9e-138 495.4 323 75.9
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 5.1e-138 495.0 352 67.6
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 1.1e-137 493.8 351 69.8
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 1.1e-137 493.8 362 66.6
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 1.5e-137 493.4 350 69.1
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 3.3e-137 492.3 357 68.6
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 5.6e-137 491.5 350 69.1
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 5.6e-137 491.5 395 63.3
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 9.6e-137 490.7 362 68.2
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.6e-136 490.0 413 60.5
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 2.8e-136 489.2 355 67.0
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 3.6e-136 488.8 359 67.4
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 3.6e-136 488.8 318 76.4
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 3.6e-136 488.8 323 73.4
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.1e-135 487.3 353 67.1
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 4.5e-134 481.9 361 65.9
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 5.8e-134 481.5 360 66.4
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 5.8e-134 481.5 318 74.5
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 2.1e-131 473.0 358 67.6
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.1e-129 467.2 353 64.0
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 1.5e-129 466.8 368 66.3
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 9.6e-129 464.2 350 64.3
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 2.0e-126 456.4 246 92.3
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 5.5e-124 448.4 314 70.7
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.3e-122 443.0 324 67.3
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 3.0e-122 442.6 293 76.5
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 4.3e-121 438.7 360 59.2
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 4.8e-120 435.3 350 59.4
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 8.2e-120 434.5 363 61.4
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 2.4e-119 433.0 351 60.1
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 2.1e-115 419.9 354 61.9
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 6.7e-98 361.7 231 76.6
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 6.7e-98 361.7 341 52.8
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 6.9e-95 351.7 350 54.3
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 4.5e-94 349.0 349 53.6
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 5.0e-93 345.5 341 49.0
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.6e-91 340.5 328 52.7
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 2.0e-81 307.0 335 47.8
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 1.1e-76 291.2 300 53.0
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 6.8e-74 282.0 211 68.7
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 4.4e-65 252.7 187 66.3
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 9.8e-65 251.5 178 69.7
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 3.4e-57 226.5 469 31.1
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.6e-41 173.7 146 61.6
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.9e-39 167.5 130 59.2
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 1.9e-39 167.5 130 59.2
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 1.1e-31 141.7 262 34.4
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 3.5e-30 136.7 160 46.9
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 2.2e-24 117.5 74 78.4
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.6e-22 109.8 91 53.8
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 4.0e-18 96.7 86 48.8
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 1.2e-17 95.1 90 45.6
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 1.6e-14 84.7 54 77.8
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 3.2e-07 60.5 75 44.0


User provided reference genes

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