Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 1.0e-137 493.4 247 100.0
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 2.3e-126 455.7 246 92.3
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 3.7e-108 395.2 247 81.4
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 5.3e-107 391.3 246 77.6
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 9.4e-104 380.6 243 78.2
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 2.7e-103 379.0 246 74.8
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 6.7e-102 374.4 247 73.7
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 5.7e-101 371.3 241 77.2
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 9.7e-101 370.5 240 76.2
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 9.7e-101 370.5 240 76.2
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.3e-100 370.2 240 76.2
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 2.8e-100 369.0 240 75.8
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.7e-100 368.6 240 75.8
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 4.8e-100 368.2 248 71.8
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 8.2e-100 367.5 246 73.6
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 1.8e-99 366.3 237 76.4
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 5.3e-99 364.8 247 73.7
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 7.7e-98 360.9 240 74.2
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.7e-97 359.8 243 73.7
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 5.0e-97 358.2 248 70.6
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 5.0e-97 358.2 240 75.0
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 1.1e-96 357.1 243 73.7
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 4.2e-96 355.1 237 72.6
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 1.2e-95 353.6 247 72.5
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 1.2e-95 353.6 241 70.5
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 1.6e-95 353.2 247 75.3
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 2.7e-95 352.4 244 72.5
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 3.6e-95 352.1 243 70.0
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 1.8e-94 349.7 241 71.8
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 2.3e-94 349.4 241 69.3
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 2.3e-94 349.4 241 71.4
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 8.8e-94 347.4 241 68.9
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 4.4e-93 345.1 246 68.3
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 1.3e-92 343.6 247 70.0
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 2.8e-92 342.4 241 70.1
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 4.8e-92 341.7 247 66.4
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 6.3e-92 341.3 246 68.7
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 6.3e-92 341.3 249 69.5
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 1.1e-91 340.5 241 68.9
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 1.8e-91 339.7 236 69.1
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 3.1e-91 339.0 236 71.2
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 5.4e-91 338.2 242 68.6
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 7.0e-91 337.8 238 67.2
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 7.0e-91 337.8 246 68.3
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 7.0e-91 337.8 246 68.3
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 7.0e-91 337.8 246 68.3
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.2e-90 337.0 242 68.6
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 1.2e-90 337.0 237 70.5
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.7e-90 335.9 236 69.9
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 3.5e-90 335.5 242 68.6
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 3.5e-90 335.5 249 68.7
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 2.9e-89 332.4 237 69.6
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 2.9e-89 332.4 238 69.3
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 3.8e-89 332.0 237 70.0
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.5e-88 330.1 244 65.2
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 1.9e-88 329.7 238 64.7
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 1.9e-88 329.7 242 64.9
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 4.2e-88 328.6 240 67.1
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 4.2e-88 328.6 263 62.4
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 1.2e-87 327.0 247 65.2
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 1.2e-87 327.0 238 66.4
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 1.6e-87 326.6 245 67.8
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.6e-87 325.5 239 69.5
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 4.7e-87 325.1 242 66.5
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 1.0e-86 323.9 236 66.1
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 1.8e-86 323.2 247 63.2
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 1.8e-86 323.2 249 64.3
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 5.2e-86 321.6 249 63.9
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 1.2e-85 320.5 249 63.1
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 2.6e-85 319.3 236 65.7
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 2.6e-85 319.3 224 69.2
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.7e-84 316.6 299 54.8
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 3.1e-83 312.4 232 65.5
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 4.1e-83 312.0 239 62.8
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.5e-82 308.9 238 62.6
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 1.7e-81 306.6 247 62.3
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 3.6e-79 298.9 243 58.0
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 1.5e-77 293.5 237 58.6
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 2.9e-73 279.3 224 62.5
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 3.9e-73 278.9 236 56.8
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 5.2e-70 268.5 202 64.9
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 4.6e-66 255.4 238 51.7
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 9.5e-64 247.7 203 61.1
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 1.2e-63 247.3 187 65.2
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 2.3e-62 243.0 228 53.1
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 2.7e-58 229.6 219 52.5
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 6.0e-50 201.8 227 46.3
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.0e-49 201.1 232 49.1
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 2.4e-46 189.9 224 48.7
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 9.3e-43 177.9 113 78.8
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.1e-39 166.8 130 60.0
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.1e-39 166.8 130 60.0
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 3.6e-31 139.4 382 26.7
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 1.2e-29 134.4 162 46.3
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 7.4e-24 115.2 93 65.6
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.0e-22 109.4 91 54.9
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 5.3e-22 109.0 74 73.0
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 2.1e-18 97.1 90 46.7
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 1.8e-17 94.0 61 75.4
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 2.3e-17 93.6 86 47.7
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 6.5e-12 75.5 132 36.4
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 3.7e-07 59.7 52 55.8
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 6.3e-07 58.9 38 76.3


User provided reference genes

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