Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 1.9e-56 222.2 110 100.0
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 3.9e-25 118.2 74 78.4
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 9.5e-24 113.6 74 77.0
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 4.7e-23 111.3 74 73.0
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.4e-22 109.8 77 71.4
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 1.4e-22 109.8 74 73.0
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.8e-22 109.4 77 71.4
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 1.8e-22 109.4 77 71.4
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 4.0e-22 108.2 73 69.9
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 6.8e-22 107.5 75 70.7
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 6.8e-22 107.5 74 73.0
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.2e-21 106.7 74 71.6
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.2e-21 106.7 74 71.6
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 4.4e-21 104.8 74 71.6
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 5.8e-21 104.4 76 68.4
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 1.7e-20 102.8 74 68.9
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 1.7e-20 102.8 74 68.9
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 2.2e-20 102.4 74 67.6
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.8e-20 101.7 74 70.3
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 3.8e-20 101.7 74 66.2
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 1.4e-19 99.8 71 69.0
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 1.9e-19 99.4 74 64.9
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 1.9e-19 99.4 80 65.0
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 2.4e-19 99.0 75 69.3
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 4.1e-19 98.2 76 65.8
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 4.1e-19 98.2 77 63.6
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 4.1e-19 98.2 64 70.3
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 5.4e-19 97.8 62 75.8
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 7.1e-19 97.4 74 62.2
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 7.1e-19 97.4 80 63.8
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 9.2e-19 97.1 74 66.2
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 9.2e-19 97.1 76 65.8
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 1.2e-18 96.7 77 63.6
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 1.6e-18 96.3 79 60.8
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 1.6e-18 96.3 74 66.2
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 3.5e-18 95.1 74 64.9
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 3.5e-18 95.1 74 62.2
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 6.0e-18 94.4 74 62.2
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 7.8e-18 94.0 62 71.0
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 7.8e-18 94.0 63 69.8
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 1.0e-17 93.6 75 61.3
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 1.3e-17 93.2 64 68.8
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 1.7e-17 92.8 62 72.6
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 1.7e-17 92.8 74 62.2
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 2.3e-17 92.4 74 62.2
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 3.0e-17 92.0 77 61.0
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 3.9e-17 91.7 76 60.5
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 3.9e-17 91.7 74 63.5
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 5.1e-17 91.3 62 72.6
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 6.6e-17 90.9 75 60.0
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 6.6e-17 90.9 79 60.8
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 6.6e-17 90.9 77 59.7
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 8.7e-17 90.5 74 66.2
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 8.7e-17 90.5 75 62.7
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 8.7e-17 90.5 75 62.7
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 8.7e-17 90.5 74 62.2
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.1e-16 90.1 65 64.6
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 1.1e-16 90.1 75 61.3
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 1.5e-16 89.7 75 61.3
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.5e-16 89.7 75 61.3
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 1.5e-16 89.7 63 66.7
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.3e-16 88.6 79 57.0
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 3.3e-16 88.6 75 61.3
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 4.3e-16 88.2 62 69.4
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 5.6e-16 87.8 75 58.7
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 1.2e-15 86.7 64 64.1
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 1.2e-15 86.7 64 64.1
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 1.2e-15 86.7 74 56.8
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 1.6e-15 86.3 74 60.8
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 2.1e-15 85.9 58 70.7
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 3.6e-15 85.1 65 63.1
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 3.6e-15 85.1 65 63.1
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 3.6e-15 85.1 65 63.1
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 3.6e-15 85.1 58 67.2
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 8.1e-15 84.0 74 58.1
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.1e-14 83.6 76 55.3
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 1.4e-14 83.2 74 58.1
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 1.8e-14 82.8 62 62.9
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 1.8e-14 82.8 58 67.2
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 2.4e-14 82.4 81 56.8
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 2.4e-14 82.4 74 50.0
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 5.2e-14 81.3 80 53.8
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 6.9e-14 80.9 74 55.4
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 3.4e-13 78.6 76 50.0
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 9.9e-13 77.0 47 78.7
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.9e-12 74.7 74 45.9
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.9e-12 74.7 74 45.9
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 2.4e-11 72.4 63 50.8
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 9.3e-11 70.5 78 44.9
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 2.7e-10 68.9 73 58.9
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 1.5e-08 63.2 80 40.0
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 2.4e-06 55.8 58 44.8
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 4.0e-06 55.1 74 44.6


User provided reference genes

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