Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 6.8e-53 210.3 100 100.0
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 6.8e-53 210.3 100 100.0
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 1.9e-42 175.6 101 85.1
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.6e-41 172.6 94 86.2
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 4.4e-36 154.5 101 71.3
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 1.4e-34 149.4 91 74.7
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 5.4e-34 147.5 98 70.4
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 9.2e-34 146.7 98 70.4
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 9.2e-34 146.7 101 68.3
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 9.2e-34 146.7 101 68.3
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.2e-33 146.4 101 68.3
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.6e-33 146.0 101 69.3
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.6e-33 146.0 101 69.3
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 3.5e-33 144.8 101 68.3
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 3.5e-33 144.8 101 68.3
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 3.5e-33 144.8 92 75.0
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 4.6e-33 144.4 101 68.3
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 6.0e-33 144.1 99 67.7
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.0e-32 143.3 98 68.4
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 8.7e-32 140.2 100 63.0
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 8.7e-32 140.2 101 63.4
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 1.9e-31 139.0 101 61.4
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 2.5e-31 138.7 101 61.4
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 7.3e-31 137.1 101 61.4
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 9.6e-31 136.7 100 63.0
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 9.6e-31 136.7 101 59.4
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.6e-30 136.0 101 61.4
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 1.6e-30 136.0 101 61.4
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 2.1e-30 135.6 100 58.0
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 2.8e-30 135.2 97 66.0
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 2.8e-30 135.2 97 66.0
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 3.6e-30 134.8 91 68.1
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 6.2e-30 134.0 100 60.0
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 1.4e-29 132.9 101 59.4
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 1.4e-29 132.9 100 55.0
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 2.4e-29 132.1 101 61.4
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 2.4e-29 132.1 100 63.0
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 3.1e-29 131.7 101 58.4
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 3.1e-29 131.7 101 60.4
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 3.1e-29 131.7 99 62.6
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 5.3e-29 131.0 90 66.7
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 9.0e-29 130.2 101 60.4
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 9.0e-29 130.2 99 60.6
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.2e-28 129.8 101 58.4
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 1.5e-28 129.4 100 61.0
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 2.0e-28 129.0 101 60.4
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.3e-27 126.3 92 59.8
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 1.7e-27 125.9 101 58.4
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 4.2e-26 121.3 93 59.1
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 5.4e-26 120.9 99 56.6
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 5.4e-26 120.9 98 57.1
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 5.4e-26 120.9 90 60.0
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 9.3e-26 120.2 98 57.1
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 9.3e-26 120.2 98 57.1
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 9.3e-26 120.2 100 52.0
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 1.6e-25 119.4 101 55.4
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 2.1e-25 119.0 98 57.1
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 2.1e-25 119.0 101 57.4
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 3.5e-25 118.2 94 57.4
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 4.6e-25 117.9 100 54.0
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 7.8e-25 117.1 82 63.4
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 1.0e-24 116.7 98 57.1
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.3e-24 116.3 82 62.2
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 1.3e-24 116.3 92 56.5
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 2.3e-24 115.5 98 55.1
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 2.3e-24 115.5 98 56.1
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 3.0e-24 115.2 98 55.1
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 3.0e-24 115.2 87 56.3
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 5.1e-24 114.4 88 55.7
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 5.1e-24 114.4 98 55.1
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 3.3e-23 111.7 101 54.5
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 7.3e-23 110.5 90 56.7
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 7.3e-23 110.5 99 52.5
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 2.1e-22 109.0 98 56.1
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 2.8e-22 108.6 101 54.5
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.1e-21 106.7 89 50.6
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 2.4e-21 105.5 89 56.2
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 2.4e-21 105.5 89 56.2
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 1.2e-20 103.2 101 49.5
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 2.6e-20 102.1 103 49.5
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 2.6e-20 102.1 103 49.5
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 4.5e-20 101.3 101 47.5
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 5.8e-20 100.9 101 49.5
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 9.9e-20 100.1 72 59.7
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 1.3e-19 99.8 92 51.1
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 2.2e-19 99.0 76 55.3
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 2.9e-19 98.6 88 50.0
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 3.8e-19 98.2 97 43.3
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 4.9e-19 97.8 101 47.5
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 8.4e-19 97.1 101 47.5
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 8.4e-19 97.1 91 47.3
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 1.1e-18 96.7 100 47.0
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 1.1e-18 96.7 101 48.5
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.1e-18 96.7 62 64.5
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 1.4e-18 96.3 59 66.1
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 3.2e-18 95.1 93 43.0
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 4.2e-18 94.7 91 49.5
QL03p062338 Quercus lobata HOM05D007077 ORTHO05D008853 4.6e-17 91.3 75 72.0
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 6.0e-17 90.9 97 40.2
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 1.0e-16 90.1 100 44.0
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 6.7e-16 87.4 106 40.6
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 1.9e-15 85.9 93 41.9
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.9e-15 85.9 108 38.9
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 5.6e-15 84.3 49 67.3
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 2.1e-14 82.4 60 53.3
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 2.8e-14 82.0 100 41.0
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 3.7e-14 81.6 100 39.0
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 3.7e-14 81.6 53 66.0
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 6.2e-14 80.9 82 41.5


User provided reference genes

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