Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p031553 Quercus lobata HOM05D007782 ORTHO05D009833 6.8e-34 146.7 74 100.0
Cfa012852 Carpinus fangiana HOM05D007782 ORTHO05D009833 1.3e-21 105.9 74 73.0
CiPaw.12G085400 Carya illinoinensis HOM05D007782 ORTHO05D009833 1.3e-21 105.9 64 79.7
Haze_08681 Corylus avellana HOM05D007782 ORTHO05D009833 2.3e-21 105.1 74 73.0
Potri.003G136500 Populus trichocarpa HOM05D007782 ORTHO05D009833 1.3e-19 99.4 65 70.8
Sabra03G0098200 Salix brachista HOM05D007782 ORTHO05D009833 1.3e-19 99.4 65 70.8
FAN04G1669 Fragaria x ananassa HOM05D007782 ORTHO05D009833 1.1e-18 96.3 63 71.4
RcHm_v2.0_Chr7g0195561 Rosa chinensis HOM05D007782 ORTHO05D009833 1.4e-18 95.9 65 67.7
FAN08G0568 Fragaria x ananassa HOM05D007782 ORTHO05D009833 1.8e-18 95.5 64 70.3
Atru.chr9.2057 Acer truncatum HOM05D007782 ORTHO05D009833 3.1e-18 94.7 65 69.2
Ciclev10023213m.g Citrus clementina HOM05D007782 ORTHO05D009833 3.1e-18 94.7 65 69.2
Prupe.5G114300 Prunus persica HOM05D007782 ORTHO05D009833 3.1e-18 94.7 63 71.4
GSVIVG01019488001 Vitis vinifera HOM05D007782 ORTHO05D009833 3.1e-18 94.7 62 72.6
Manes.01G046100 Manihot esculenta HOM05D007782 ORTHO05D009833 5.3e-18 94.0 65 67.7
Ca_17498_v3 Cicer arietinum L. HOM05D007782 ORTHO05D009833 9.0e-18 93.2 74 64.9
SalBow8G2543 Salvia bowleyana HOM05D007782 ORTHO05D009833 1.2e-17 92.8 65 64.6
Migut.E01229 Erythranthe guttata HOM05D007782 ORTHO05D009833 3.4e-17 91.3 64 67.2
MD06G1100800 Malus domestica HOM05D007782 ORTHO05D009833 5.8e-17 90.5 57 71.9
TPR.G3446 Trifolium pratense HOM05D007782 ORTHO05D009833 7.6e-17 90.1 75 65.3
Psat7g027800 Pisum sativum HOM05D007782 ORTHO05D009833 1.3e-16 89.4 66 69.7
Glyma.08G021000 Glycine max HOM05D007782 ORTHO05D009833 2.2e-16 88.6 65 67.7
Hund14240 Selenicereus undatus HOM05D007782 ORTHO05D009833 2.2e-16 88.6 61 65.6
TAR636G2384 Trochodendron aralioides HOM05D007782 ORTHO05D009833 2.9e-16 88.2 58 70.7
Dinv37557 Davidia involucrata HOM05D007782 ORTHO05D009833 3.8e-16 87.8 60 70.0
Phvul.002G295900 Phaseolus vulgaris HOM05D007782 ORTHO05D009833 4.9e-16 87.4 65 67.7
Thecc.03G292200 Theobroma cacao HOM05D007782 ORTHO05D009833 4.9e-16 87.4 61 65.6
Eucgr.E00835 Eucalyptus grandis HOM05D007782 ORTHO05D009833 8.4e-16 86.7 60 70.0
Lalb_Chr09g0332651 Lupinus albus HOM05D007782 ORTHO05D009833 8.4e-16 86.7 59 72.9
Peaxi162Scf00117g01316 Petunia axillaris HOM05D007782 ORTHO05D009833 1.4e-15 85.9 66 63.6
COL.COLO4_21276 Corchorus olitorius HOM05D007782 ORTHO05D009833 1.9e-15 85.5 64 62.5
Lj4g0009467 Lotus japonicus HOM05D007782 ORTHO05D009833 2.4e-15 85.1 59 69.5
Lalb_Chr05g0224281 Lupinus albus HOM05D007782 ORTHO05D009833 2.4e-15 85.1 59 69.5
MELO3C005735.2 Cucumis melo HOM05D007782 ORTHO05D009833 3.2e-15 84.7 53 71.7
Aa31LG6G7000 Aethionema arabicum HOM05D007782 ORTHO05D009833 5.4e-15 84.0 54 68.5
PGSC0003DMG400004987 Solanum tuberosum HOM05D007782 ORTHO05D009833 5.4e-15 84.0 48 75.0
THA.LOC104814903 Tarenaya hassleriana HOM05D007782 ORTHO05D009833 5.4e-15 84.0 64 59.4
AT4G23760 Arabidopsis thaliana HOM05D007782 ORTHO05D009833 7.1e-15 83.6 57 63.2
CARHR231160 Cardamine hirsuta HOM05D007782 ORTHO05D009833 7.1e-15 83.6 58 63.8
DCAR_027723 Daucus carota HOM05D007782 ORTHO05D009833 7.1e-15 83.6 65 61.5
Thhalv10026535m.g Eutrema salsugineum HOM05D007782 ORTHO05D009833 7.1e-15 83.6 58 67.2
Nn1g01795 Nelumbo nucifera HOM05D007782 ORTHO05D009833 7.1e-15 83.6 62 62.9
Sed0001446 Sechium edule HOM05D007782 ORTHO05D009833 7.1e-15 83.6 51 72.5
Aqoxy7G00161 Aquilegia oxysepala HOM05D007782 ORTHO05D009833 9.3e-15 83.2 53 71.7
ClCG01G002060 Citrullus lanatus HOM05D007782 ORTHO05D009833 9.3e-15 83.2 53 69.8
CsaV3_5G002190 Cucumis sativus L. HOM05D007782 ORTHO05D009833 9.3e-15 83.2 53 69.8
Actinidia27340 Actinidia chinensis HOM05D007782 ORTHO05D009833 1.2e-14 82.8 60 61.7
Solyc12g056090.2 Solanum lycopersicum HOM05D007782 ORTHO05D009833 1.2e-14 82.8 48 72.9
Sopen12g028600 Solanum pennellii HOM05D007782 ORTHO05D009833 1.2e-14 82.8 48 72.9
Cc08_g15700 Coffea canephora HOM05D007782 ORTHO05D009833 2.7e-14 81.6 65 56.9
Potri.001G094750 Populus trichocarpa HOM05D007782 ORTHO05D009833 2.7e-14 81.6 56 76.8
arahy.Tifrunner.gnm1.ann1.WVD97E Arachis hypogaea HOM05D007782 ORTHO05D009833 4.6e-14 80.9 61 63.9
BcaNung05927 Brassica carinata HOM05D007782 ORTHO05D009833 4.6e-14 80.9 62 61.3
arahy.Tifrunner.gnm1.ann1.UB6WN3 Arachis hypogaea HOM05D007782 ORTHO05D009833 6.0e-14 80.5 72 58.3
A03p54750 Brassica napus HOM05D007782 ORTHO05D009833 6.0e-14 80.5 63 60.3
BraA03t14542Z Brassica rapa HOM05D007782 ORTHO05D009833 6.0e-14 80.5 63 60.3
HanXRQChr07g0191091 Helianthus annuus HOM05D007782 ORTHO05D009833 6.0e-14 80.5 50 74.0
unitig_61.g26273 Utricularia gibba HOM05D007782 ORTHO05D009833 6.0e-14 80.5 57 63.2
AL7G29590 Arabidopsis lyrata HOM05D007782 ORTHO05D009833 1.0e-13 79.7 55 65.5
Sp6g06300 Schrenkiella parvula HOM05D007782 ORTHO05D009833 1.0e-13 79.7 59 57.6
CDE10G0352 Ceratophyllum demersum HOM05D007782 ORTHO05D009833 1.3e-13 79.3 62 59.7
CDE10G0746 Ceratophyllum demersum HOM05D007782 ORTHO05D009833 1.3e-13 79.3 62 59.7
C07p53110 Brassica napus HOM05D007782 ORTHO05D009833 1.8e-13 79.0 62 59.7
BolC7t45807H Brassica oleracea HOM05D007782 ORTHO05D009833 1.8e-13 79.0 62 59.7
Thhalv10029109m.g Eutrema salsugineum HOM05D007782 ORTHO05D009833 1.8e-13 79.0 61 57.4
vmacro11447 Vaccinium macrocarpon HOM05D007782 ORTHO05D009833 1.8e-13 79.0 69 59.4
FAN18G3918 Fragaria x ananassa HOM05D007782 ORTHO05D009833 2.3e-13 78.6 100 46.0
Glyma.05G214700 Glycine max HOM05D007782 ORTHO05D009833 2.3e-13 78.6 55 70.9
Carub.0007s1735 Capsella rubella HOM05D007782 ORTHO05D009833 3.9e-13 77.8 54 66.7
Sp7g21730 Schrenkiella parvula HOM05D007782 ORTHO05D009833 3.9e-13 77.8 66 59.1
Lsat_1_v5_gn_6_11880 Lactuca sativa HOM05D007782 ORTHO05D009833 5.1e-13 77.4 62 58.1
CAN.G2065.2 Capsicum annuum HOM05D007782 ORTHO05D009833 1.5e-12 75.9 53 62.3
MBI06_g22402_MAGBIO Magnolia biondii HOM05D007782 ORTHO05D009833 2.5e-12 75.1 64 59.4
PSO135G0862 Papaver somniferum HOM05D007782 ORTHO05D009833 3.3e-12 74.7 72 52.8
CARHR255470 Cardamine hirsuta HOM05D007782 ORTHO05D009833 5.6e-12 73.9 67 53.7
Nitab4.5_0002788g0030 Nicotiana tabacum HOM05D007782 ORTHO05D009833 5.6e-12 73.9 47 66.0
AL6G45280 Arabidopsis lyrata HOM05D007782 ORTHO05D009833 1.6e-11 72.4 57 54.4
CAN.G98.14 Capsicum annuum HOM05D007782 ORTHO05D009833 2.1e-11 72.0 51 62.7
Rhsim02G0240700 Rhododendron simsii HOM05D007782 ORTHO05D009833 1.8e-10 68.9 54 63.0
BcaNung03194 Brassica carinata HOM05D007782 ORTHO05D009833 4.0e-10 67.8 80 46.2
Medtr8g099240 Medicago truncatula HOM05D007782 ORTHO05D009833 5.3e-10 67.4 61 59.0
AagrBONN_evm.TU.Sc2ySwM_362.1714 Anthoceros agrestis HOM05D007782 ORTHO05D009833 6.9e-10 67.0 61 50.8
Os01g0224300 Oryza sativa ssp. japonica HOM05D007782 ORTHO05D009833 9.0e-10 66.6 65 52.3
TWI81G1055 Tripterygium wilfordii HOM05D007782 ORTHO05D009833 4.5e-09 64.3 55 54.5
ATR1093G039 Amborella trichopoda HOM05D007782 ORTHO05D009833 5.8e-09 63.9 60 48.3
Duzib084G1198 Durio zibethinus HOM05D007782 ORTHO05D009833 2.9e-08 61.6 45 60.0
Mapoly0007s0070 Marchantia polymorpha HOM05D007782 ORTHO05D009833 3.2e-07 58.2 58 48.3


User provided reference genes

Program Settings