Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p031126 Quercus lobata HOM05D004656 ORTHO05D005404 1.7e-108 396.0 191 100.0
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 6.7e-65 251.1 174 79.3
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 6.7e-65 251.1 174 79.3
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 1.0e-57 227.3 174 70.1
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 1.3e-57 226.9 174 70.1
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 1.1e-56 223.8 173 69.9
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 9.6e-56 220.7 174 71.3
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 4.8e-55 218.4 174 69.0
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 4.8e-55 218.4 174 68.4
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 1.8e-54 216.5 174 69.0
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 1.2e-53 213.8 174 68.4
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 2.6e-53 212.6 174 66.7
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 3.4e-53 212.2 174 68.4
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 5.8e-53 211.5 173 69.4
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.3e-52 210.3 173 69.4
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 2.2e-52 209.5 174 69.5
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 2.2e-52 209.5 174 67.2
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 6.5e-52 208.0 174 68.4
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 1.4e-51 206.8 174 64.9
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 1.4e-51 206.8 174 69.0
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 2.5e-51 206.1 184 63.0
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 5.5e-51 204.9 184 64.7
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 5.5e-51 204.9 174 64.9
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 5.5e-51 204.9 174 64.9
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 5.5e-51 204.9 174 64.9
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 9.3e-51 204.1 194 62.4
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 9.3e-51 204.1 174 66.1
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.6e-50 203.4 174 67.2
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 2.1e-50 203.0 174 66.1
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 2.7e-50 202.6 174 65.5
Ca_18486_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 3.5e-50 202.2 177 63.8
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 6.0e-50 201.4 173 64.2
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 1.3e-49 200.3 174 64.4
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 1.3e-49 200.3 175 65.1
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 1.3e-49 200.3 177 62.1
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.8e-49 199.9 174 66.1
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 3.0e-49 199.1 177 61.6
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 5.1e-49 198.4 174 68.4
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 8.7e-49 197.6 174 63.2
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 8.7e-49 197.6 174 65.5
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 1.1e-48 197.2 174 65.5
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 1.1e-48 197.2 174 63.2
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 1.5e-48 196.8 174 63.2
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 1.5e-48 196.8 172 65.1
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 3.3e-48 195.7 183 61.2
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 4.3e-48 195.3 173 63.0
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 7.4e-48 194.5 174 65.5
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 1.6e-47 193.4 174 64.4
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 1.6e-47 193.4 174 62.1
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 3.7e-47 192.2 174 60.3
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 4.8e-47 191.8 174 62.6
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 4.8e-47 191.8 174 62.6
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 4.8e-47 191.8 174 65.5
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 6.3e-47 191.4 185 58.9
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 1.1e-46 190.7 174 66.1
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 1.8e-46 189.9 174 62.6
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 1.8e-46 189.9 174 62.6
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 1.8e-46 189.9 172 62.8
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 1.8e-46 189.9 185 58.4
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 2.4e-46 189.5 185 57.8
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 2.4e-46 189.5 174 64.4
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 2.4e-46 189.5 173 62.4
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 3.1e-46 189.1 174 62.6
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 3.1e-46 189.1 173 63.6
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 4.1e-46 188.7 174 62.1
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 4.1e-46 188.7 172 60.5
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 5.3e-46 188.3 174 62.6
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 9.0e-46 187.6 174 62.1
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 9.0e-46 187.6 175 61.7
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 1.2e-45 187.2 174 60.9
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 1.5e-45 186.8 174 61.5
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 2.0e-45 186.4 174 60.9
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 4.5e-45 185.3 173 60.7
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 5.9e-45 184.9 174 60.3
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 1.7e-44 183.3 172 61.6
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 1.9e-43 179.9 174 60.3
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 2.5e-43 179.5 172 58.7
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 3.2e-43 179.1 184 57.6
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 3.2e-43 179.1 177 59.3
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 4.2e-43 178.7 183 57.9
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 7.2e-43 177.9 184 58.2
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 7.2e-43 177.9 183 57.9
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 9.3e-43 177.6 171 59.1
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 9.3e-43 177.6 170 62.4
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 1.6e-42 176.8 177 58.2
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 2.1e-42 176.4 184 57.1
AL7G32520 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 2.7e-42 176.0 172 57.0
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 8.7e-41 171.0 178 56.7
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 1.9e-40 169.9 175 57.1
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 4.3e-40 168.7 192 55.2
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 8.2e-39 164.5 187 51.3
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 2.0e-37 159.8 183 53.6
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 2.6e-37 159.5 173 56.6
unitig_8.g3352 Utricularia gibba HOM05D004656 ORTHO05D005404 3.8e-36 155.6 146 58.9
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 2.7e-34 149.4 150 59.3
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 6.1e-34 148.3 174 51.1
Eucgr.C00026 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.7e-31 139.0 92 78.3
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 1.2e-29 134.0 178 43.8
Hma1.2p1_1241F.1_g269840 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 1.0e-28 131.0 121 66.9
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 2.2e-23 113.2 172 45.3
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 5.9e-21 105.1 174 41.4
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 7.7e-21 104.8 181 44.8
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 2.2e-20 103.2 150 42.7
Hund23620 Selenicereus undatus HOM05D004656 ORTHO05D005404 1.1e-19 100.9 60 81.7
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 7.2e-19 98.2 181 43.6
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 9.4e-19 97.8 145 39.3
SEGI_08767 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 3.1e-14 82.8 141 40.4
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 3.5e-13 79.3 113 50.4
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 3.2e-11 72.8 148 33.1
Eucgr.D02662 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.4e-08 62.8 48 70.8
EL10Ac9g22460 Beta vulgaris HOM05D004656 ORTHO05D005404 7.5e-08 61.6 38 76.3
EL10Ac6g14063 Beta vulgaris HOM05D004656 ORTHO05D005404 4.8e-07 58.9 38 73.7


User provided reference genes

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