Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p031049 Quercus lobata HOM05D006501 ORTHO05D008241 2.5e-71 271.9 133 100.0
CiPaw.11G123100 Carya illinoinensis HOM05D006501 ORTHO05D008241 7.7e-52 207.2 125 80.8
Haze_08636 Corylus avellana HOM05D006501 ORTHO05D008241 1.2e-49 199.9 126 80.2
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 7.0e-45 184.1 122 78.7
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 4.1e-37 158.3 116 72.4
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 4.5e-36 154.8 107 72.9
FAN18G2585 Fragaria x ananassa HOM05D006501 ORTHO05D008241 5.9e-36 154.5 110 70.9
FAN18G4356 Fragaria x ananassa HOM05D006501 ORTHO05D008241 5.9e-36 154.5 110 70.9
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 1.0e-35 153.7 115 69.6
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 1.3e-35 153.3 107 73.8
Duzib205G0456 Durio zibethinus HOM05D006501 ORTHO05D008241 2.9e-35 152.1 117 65.8
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 2.9e-35 152.1 108 73.1
FvH4_5g04360 Fragaria vesca HOM05D006501 ORTHO05D008241 5.0e-35 151.4 106 72.6
FAN04G2094 Fragaria x ananassa HOM05D006501 ORTHO05D008241 6.5e-35 151.0 110 70.9
FAN13G2672 Fragaria x ananassa HOM05D006501 ORTHO05D008241 6.5e-35 151.0 110 70.9
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 8.5e-35 150.6 118 67.8
FAN08G0187 Fragaria x ananassa HOM05D006501 ORTHO05D008241 2.5e-34 149.1 109 70.6
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 4.2e-34 148.3 119 66.4
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 9.4e-34 147.1 118 64.4
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 2.1e-33 146.0 104 73.1
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 2.7e-33 145.6 120 68.3
Duzib068G1433 Durio zibethinus HOM05D006501 ORTHO05D008241 4.7e-33 144.8 113 67.3
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 6.1e-33 144.4 106 70.8
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 6.1e-33 144.4 109 72.5
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 8.0e-33 144.1 106 71.7
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 1.8e-32 142.9 110 71.8
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 2.3e-32 142.5 112 67.9
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 1.2e-31 140.2 96 76.0
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 3.4e-31 138.7 116 68.1
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 4.4e-31 138.3 109 65.1
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 1.3e-30 136.7 116 66.4
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 2.8e-30 135.6 100 70.0
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 3.7e-30 135.2 117 65.8
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 6.3e-30 134.4 116 65.5
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 1.4e-29 133.3 110 65.5
Hma1.2p1_0952F.1_g241020 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 2.4e-29 132.5 99 71.7
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 2.4e-29 132.5 99 71.7
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 2.4e-29 132.5 117 63.2
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 3.1e-29 132.1 102 68.6
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 3.1e-29 132.1 104 68.3
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 3.1e-29 132.1 114 65.8
Nitab4.5_0002944g0130 Nicotiana tabacum HOM05D006501 ORTHO05D008241 3.1e-29 132.1 78 80.8
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 4.1e-29 131.7 97 69.1
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 1.2e-28 130.2 116 64.7
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 2.0e-28 129.4 121 62.0
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 2.7e-28 129.0 72 87.5
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 1.0e-27 127.1 112 64.3
MBI07_g24349_MAGBIO Magnolia biondii HOM05D006501 ORTHO05D008241 1.0e-27 127.1 106 67.0
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 1.3e-27 126.7 136 55.1
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 1.7e-27 126.3 87 75.9
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 2.2e-27 125.9 77 80.5
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 2.2e-27 125.9 70 84.3
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 2.2e-27 125.9 106 66.0
SalBow1G7260 Salvia bowleyana HOM05D006501 ORTHO05D008241 2.9e-27 125.6 72 86.1
SalBow1G8172 Salvia bowleyana HOM05D006501 ORTHO05D008241 2.9e-27 125.6 72 86.1
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 3.8e-27 125.2 71 87.3
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 5.0e-27 124.8 112 67.0
BcaB07g31511 Brassica carinata HOM05D006501 ORTHO05D008241 6.5e-27 124.4 129 57.4
Cpa.g.sc79.61 Carica papaya HOM05D006501 ORTHO05D008241 6.5e-27 124.4 121 57.0
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 6.5e-27 124.4 119 62.2
BcaB07g31509 Brassica carinata HOM05D006501 ORTHO05D008241 8.5e-27 124.0 118 58.5
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 8.5e-27 124.0 121 60.3
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 1.1e-26 123.6 75 82.7
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 1.1e-26 123.6 102 64.7
Lsat_1_v5_gn_6_12120 Lactuca sativa HOM05D006501 ORTHO05D008241 1.5e-26 123.2 113 62.8
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 1.5e-26 123.2 69 82.6
Ah.12g052370 Amaranthus hybridus HOM05D006501 ORTHO05D008241 1.9e-26 122.9 75 78.7
A09p14290 Brassica napus HOM05D006501 ORTHO05D008241 2.5e-26 122.5 129 54.3
SGA_v2.0_scaffold305G47943 Striga asiatica HOM05D006501 ORTHO05D008241 2.5e-26 122.5 75 82.7
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 2.5e-26 122.5 109 63.3
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 3.2e-26 122.1 102 66.7
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 3.2e-26 122.1 102 66.7
Atru.chr9.2018 Acer truncatum HOM05D006501 ORTHO05D008241 4.2e-26 121.7 124 58.9
C09p17200 Brassica napus HOM05D006501 ORTHO05D008241 4.2e-26 121.7 129 55.0
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 5.5e-26 121.3 115 65.2
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 5.5e-26 121.3 113 62.8
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 5.5e-26 121.3 102 65.7
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 7.2e-26 120.9 87 69.0
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 7.2e-26 120.9 122 56.6
TAR374G0759 Trochodendron aralioides HOM05D006501 ORTHO05D008241 1.6e-25 119.8 65 87.7
TAR374G1465 Trochodendron aralioides HOM05D006501 ORTHO05D008241 1.6e-25 119.8 65 87.7
BcaC04g22628 Brassica carinata HOM05D006501 ORTHO05D008241 2.7e-25 119.0 129 52.7
Potri.001G093001 Populus trichocarpa HOM05D006501 ORTHO05D008241 3.6e-25 118.6 62 90.3
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 3.6e-25 118.6 60 95.0
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 3.6e-25 118.6 109 63.3
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 6.1e-25 117.9 123 56.1
Thhalv10023703m.g Eutrema salsugineum HOM05D006501 ORTHO05D008241 6.1e-25 117.9 110 61.8
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 6.1e-25 117.9 98 67.3
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 8.0e-25 117.5 105 62.9
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 1.0e-24 117.1 63 88.9
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 1.4e-24 116.7 126 55.6
Carub.0002s0043 Capsella rubella HOM05D006501 ORTHO05D008241 1.8e-24 116.3 123 56.1
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 2.3e-24 115.9 125 55.2
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 3.0e-24 115.5 122 55.7
CARHR046590 Cardamine hirsuta HOM05D006501 ORTHO05D008241 3.0e-24 115.5 70 82.9
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 4.0e-24 115.2 83 71.1
Atru.chr9.2021 Acer truncatum HOM05D006501 ORTHO05D008241 5.2e-24 114.8 119 58.8
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 5.2e-24 114.8 84 72.6
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 5.2e-24 114.8 81 69.1
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 1.2e-23 113.6 86 68.6
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea HOM05D006501 ORTHO05D008241 1.5e-23 113.2 107 59.8
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 1.5e-23 113.2 71 83.1
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 1.5e-23 113.2 80 73.8
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 2.6e-23 112.5 72 79.2
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea HOM05D006501 ORTHO05D008241 5.7e-23 111.3 113 55.8
BcaC04g22630 Brassica carinata HOM05D006501 ORTHO05D008241 5.7e-23 111.3 63 85.7
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 7.5e-23 110.9 126 52.4
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 1.7e-22 109.8 70 80.0
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 1.7e-22 109.8 67 74.6
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 2.8e-22 109.0 74 71.6
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 1.8e-21 106.3 69 73.9
SEGI_03665 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 7.0e-21 104.4 56 89.3
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 7.0e-21 104.4 56 89.3
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 4.5e-20 101.7 56 85.7
CBR_g30621 Chara braunii HOM05D006501 ORTHO05D008241 1.1e-18 97.1 60 81.7
SalBow8G4809 Salvia bowleyana HOM05D006501 ORTHO05D008241 4.2e-18 95.1 126 47.6
SGA_v2.0_scaffold144G35857 Striga asiatica HOM05D006501 ORTHO05D008241 5.5e-18 94.7 114 50.0
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 1.6e-17 93.2 58 81.0
Migut.E01245 Erythranthe guttata HOM05D006501 ORTHO05D008241 1.4e-16 90.1 111 51.4
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 2.8e-14 82.4 53 71.7
Zm00001eb150250 Zea mays HOM05D006501 ORTHO05D008241 5.2e-08 61.6 52 67.3
Hund07493 Selenicereus undatus HOM05D000089 ORTHO05D000104 4.9e-06 55.1 32 84.4


User provided reference genes

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