Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 3.2e-47 191.4 97 100.0
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 6.4e-40 167.2 95 87.4
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 6.4e-40 167.2 95 87.4
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 1.4e-39 166.0 98 87.8
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.4e-39 166.0 95 86.3
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.4e-39 166.0 95 85.3
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 2.4e-39 165.2 98 86.7
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 2.4e-39 165.2 95 87.4
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.2e-38 162.9 94 86.2
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 1.2e-38 162.9 94 86.2
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 1.6e-38 162.5 97 82.5
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.1e-38 162.2 94 86.2
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 4.6e-38 161.0 95 84.2
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 7.8e-38 160.2 94 84.0
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 1.0e-37 159.8 95 83.2
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 1.3e-37 159.5 95 83.2
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.3e-37 159.5 94 83.0
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 2.3e-37 158.7 94 85.1
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 2.3e-37 158.7 95 84.2
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 5.1e-37 157.5 94 81.9
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 8.7e-37 156.8 95 81.1
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 8.7e-37 156.8 95 81.1
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 1.1e-36 156.4 93 83.9
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 1.9e-36 155.6 95 82.1
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.9e-36 155.6 95 81.1
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 2.5e-36 155.2 95 81.1
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 4.3e-36 154.5 96 81.2
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 5.6e-36 154.1 93 81.7
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 5.6e-36 154.1 95 80.0
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 9.6e-36 153.3 95 82.1
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 1.3e-35 152.9 93 78.5
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 1.6e-35 152.5 95 80.0
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 2.1e-35 152.1 96 78.1
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.1e-35 152.1 93 78.5
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.8e-35 151.8 94 78.7
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 2.8e-35 151.8 95 77.9
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.8e-35 151.8 95 80.0
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 3.6e-35 151.4 95 78.9
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 4.8e-35 151.0 92 81.5
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 6.2e-35 150.6 92 81.5
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 6.2e-35 150.6 95 77.9
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 8.1e-35 150.2 95 77.9
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 8.1e-35 150.2 92 80.4
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.1e-34 149.8 89 82.0
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.1e-34 149.8 89 82.0
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 1.1e-34 149.8 95 76.8
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 1.4e-34 149.4 94 74.5
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 2.4e-34 148.7 95 77.9
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 5.3e-34 147.5 94 73.4
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 5.3e-34 147.5 83 86.7
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 6.9e-34 147.1 95 77.9
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 9.0e-34 146.7 95 74.7
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.2e-33 146.4 96 79.2
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.2e-33 146.4 95 77.9
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 1.5e-33 146.0 93 76.3
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 2.0e-33 145.6 95 74.7
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.6e-33 145.2 95 75.8
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 4.5e-33 144.4 96 76.0
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 5.8e-33 144.1 96 74.0
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.8e-33 144.1 96 74.0
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.8e-33 144.1 96 74.0
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 7.6e-33 143.7 95 75.8
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 7.6e-33 143.7 96 74.0
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 9.9e-33 143.3 93 80.6
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 9.9e-33 143.3 94 75.5
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 1.3e-32 142.9 95 74.7
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 1.3e-32 142.9 95 74.7
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 2.2e-32 142.1 97 72.2
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.9e-32 141.0 95 71.6
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 4.9e-32 141.0 97 71.1
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 3.2e-31 138.3 96 70.8
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 5.4e-31 137.5 92 72.8
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 1.2e-30 136.3 94 70.2
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 3.5e-30 134.8 93 74.2
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.1e-28 129.8 124 57.3
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 1.5e-28 129.4 87 71.3
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 1.5e-28 129.4 93 66.7
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 3.3e-28 128.3 92 66.3
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 5.6e-28 127.5 94 68.1
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 5.6e-28 127.5 95 64.2
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 7.4e-28 127.1 75 81.3
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 1.6e-27 125.9 87 72.4
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 4.8e-27 124.4 87 72.4
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 1.4e-26 122.9 94 63.8
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 1.4e-26 122.9 96 66.7
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 1.8e-26 122.5 75 76.0
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 1.8e-26 122.5 94 63.8
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 1.8e-26 122.5 94 63.8
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 1.8e-26 122.5 94 63.8
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 1.8e-26 122.5 94 63.8
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 6.9e-26 120.6 70 88.6
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 9.0e-26 120.2 89 68.5
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 1.2e-25 119.8 94 63.8
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 1.5e-25 119.4 94 63.8
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.5e-25 117.9 69 84.1
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 7.6e-25 117.1 73 74.0
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.7e-24 115.9 89 64.0
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 2.9e-24 115.2 92 66.3
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 8.4e-24 113.6 84 69.0
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.4e-23 112.8 68 77.9
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 4.2e-23 111.3 82 64.6
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 7.1e-23 110.5 86 65.1
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 7.9e-22 107.1 81 65.4
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 5.6e-20 100.9 67 76.1
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.6e-19 99.4 96 56.2
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 4.8e-19 97.8 94 52.1
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 1.2e-14 83.2 67 62.7
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 2.1e-14 82.4 50 76.0
ECA236G1637 Erigeron canadensis HOM05D000015 ORTHO05D009146 3.2e-07 58.5 96 39.6
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 9.3e-07 57.0 93 40.9
HanXRQChr15g0470561 Helianthus annuus HOM05D000015 ORTHO05D009146 1.2e-06 56.6 75 45.3
Dinv13936 Davidia involucrata HOM05D000015 ORTHO05D009146 2.1e-06 55.8 57 50.9
Lj1A1236G69 Lonicera japonica HOM05D000015 ORTHO05D009146 2.1e-06 55.8 77 40.3
Aqoxy1G02962 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 2.7e-06 55.5 94 39.4
Sabra11G0008100 Salix brachista HOM05D000015 ORTHO05D009146 4.6e-06 54.7 57 50.9
GSVIVG01004808001 Vitis vinifera HOM05D000015 ORTHO05D009146 6.1e-06 54.3 104 36.5
CDE06G1972 Ceratophyllum demersum HOM05D000015 ORTHO05D003525 7.9e-06 53.9 73 39.7


User provided reference genes

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