Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 1.5e-71 272.7 137 100.0
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 7.1e-69 263.8 136 97.8
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 1.9e-61 239.2 136 87.5
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 3.5e-52 208.4 135 80.0
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 2.0e-31 139.4 136 59.6
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 1.3e-30 136.7 142 58.5
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 9.4e-29 130.6 136 57.4
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 1.0e-27 127.1 137 58.4
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 1.1e-26 123.6 130 58.5
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 2.0e-26 122.9 131 61.1
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 5.7e-26 121.3 130 57.7
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 5.7e-26 121.3 130 57.7
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 6.1e-20 101.3 134 47.0
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 1.0e-19 100.5 129 49.6
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 1.0e-19 100.5 134 51.5
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 4.0e-19 98.6 121 47.1
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.0e-19 98.6 119 50.4
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.0e-19 98.6 119 50.4
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.0e-19 98.6 119 50.4
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 4.4e-18 95.1 119 50.4
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 5.7e-18 94.7 139 46.8
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 5.7e-18 94.7 119 48.7
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 7.5e-18 94.4 123 52.8
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 1.7e-17 93.2 131 48.9
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 2.8e-17 92.4 126 50.8
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 6.3e-17 91.3 131 48.1
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 1.4e-16 90.1 119 51.3
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 3.1e-16 89.0 124 49.2
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 3.1e-16 89.0 119 51.3
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 4.1e-16 88.6 115 46.1
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 7.0e-16 87.8 109 45.9
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 1.6e-15 86.7 126 49.2
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 1.6e-15 86.7 126 49.2
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.0e-15 86.3 127 46.5
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 4.5e-15 85.1 128 43.0
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 4.5e-15 85.1 126 46.0
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 7.7e-15 84.3 126 48.4
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 7.7e-15 84.3 108 47.2
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 7.7e-15 84.3 106 49.1
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 1.0e-14 84.0 106 48.1
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 1.7e-14 83.2 119 46.2
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.7e-14 83.2 123 43.9
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 2.2e-14 82.8 115 46.1
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.2e-14 82.8 127 45.7
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 2.9e-14 82.4 123 46.3
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 3.8e-14 82.0 112 44.6
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 1.1e-13 80.5 102 52.0
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.5e-13 80.1 116 45.7
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.9e-13 79.7 116 45.7
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 3.2e-13 79.0 110 43.6
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 3.2e-13 79.0 102 46.1
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 7.2e-13 77.8 131 47.3
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 7.2e-13 77.8 131 47.3
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 1.2e-12 77.0 107 43.9
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.2e-12 77.0 131 45.0
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.2e-12 77.0 131 45.0
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 1.2e-12 77.0 112 44.6
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.2e-12 77.0 66 59.1
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 1.2e-12 77.0 66 59.1
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.6e-12 76.6 131 45.8
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 4.7e-12 75.1 108 42.6
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 6.1e-12 74.7 131 45.8
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 8.0e-12 74.3 102 48.0
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 1.0e-11 73.9 50 68.0
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 2.3e-11 72.8 64 60.9
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 3.0e-11 72.4 127 38.6
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 4.0e-11 72.0 111 40.5
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 5.2e-11 71.6 112 42.0
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 6.8e-11 71.2 112 40.2
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 2.2e-09 66.2 110 39.1
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 3.7e-09 65.5 120 39.2
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 3.7e-09 65.5 106 37.7
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 6.3e-09 64.7 100 38.0
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 8.3e-09 64.3 106 38.7
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 8.3e-09 64.3 147 34.7
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 1.8e-08 63.2 62 54.8
Psat2g185360 Pisum sativum HOM05D007727 ORTHO05D009078 1.8e-08 63.2 119 37.8
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 2.4e-08 62.8 118 36.4
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 3.1e-08 62.4 125 36.0
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 4.1e-08 62.0 110 37.3
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 7.0e-08 61.2 144 33.3
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 9.1e-08 60.8 128 32.0
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 1.2e-07 60.5 119 35.3
Sed0000706 Sechium edule HOM05D007727 ORTHO05D009078 1.6e-07 60.1 54 50.0
TPR.G3415 Trifolium pratense HOM05D007727 ORTHO05D009078 1.6e-07 60.1 66 47.0
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 2.0e-07 59.7 45 62.2
Nitab4.5_0002782g0020 Nicotiana tabacum HOM05D011491 ORTHO05D009078 2.7e-07 59.3 102 37.3
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 2.7e-07 59.3 46 56.5
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 2.7e-07 59.3 58 48.3
TAR374G1599 Trochodendron aralioides HOM05D026466 ORTHO05D009078 4.5e-07 58.5 133 39.8
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 5.9e-07 58.2 106 37.7
TAR374G1217 Trochodendron aralioides HOM05D026466 ORTHO05D009078 5.9e-07 58.2 137 37.2
CAN.G1804.6 Capsicum annuum HOM05D011491 ORTHO05D009078 7.7e-07 57.8 124 32.3
Medtr8g099485 Medicago truncatula HOM05D007727 ORTHO05D009078 7.7e-07 57.8 99 40.4
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 1.0e-06 57.4 105 36.2
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 1.0e-06 57.4 107 33.6
MSTRG.25674 Avicennia marina HOM05D007727 ORTHO05D009078 1.3e-06 57.0 123 32.5
CAN.G1804.7 Capsicum annuum HOM05D011491 ORTHO05D009078 1.7e-06 56.6 124 32.3
Thhalv10026259m.g Eutrema salsugineum HOM05D009622 ORTHO05D011757 1.7e-06 56.6 55 45.5
Peaxi162Scf00074g00092 Petunia axillaris HOM05D011491 ORTHO05D009078 2.3e-06 56.2 114 35.1
BcaNung04083 Brassica carinata HOM05D009622 ORTHO05D011757 5.0e-06 55.1 69 37.7
BcaNung04240 Brassica carinata HOM05D009622 ORTHO05D011757 5.0e-06 55.1 69 37.7
C07p53170 Brassica napus HOM05D009622 ORTHO05D011757 5.0e-06 55.1 69 37.7
BolC7t45813H Brassica oleracea HOM05D009622 ORTHO05D011757 5.0e-06 55.1 69 37.7
BcaC09g50936 Brassica carinata HOM05D009622 ORTHO05D011757 6.6e-06 54.7 55 45.5
A01p15180 Brassica napus HOM05D009622 ORTHO05D011757 6.6e-06 54.7 55 45.5
C01p19110 Brassica napus HOM05D009622 ORTHO05D011757 6.6e-06 54.7 55 45.5
BolC1t01837H Brassica oleracea HOM05D009622 ORTHO05D011757 6.6e-06 54.7 55 45.5
BraA01t01456Z Brassica rapa HOM05D009622 ORTHO05D011757 6.6e-06 54.7 55 45.5
CARHR231260 Cardamine hirsuta HOM05D009622 ORTHO05D011757 6.6e-06 54.7 48 47.9
Medtr8g099475 Medicago truncatula HOM05D007727 ORTHO05D009078 8.6e-06 54.3 72 43.1


User provided reference genes

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