Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p030389 Quercus lobata HOM05D007727 ORTHO05D009078 5.2e-78 294.3 145 100.0
QL02p030408 Quercus lobata HOM05D007727 ORTHO05D009078 1.4e-67 259.6 145 88.3
QL02p030393 Quercus lobata HOM05D007727 ORTHO05D009078 6.8e-62 240.7 136 87.5
QL02p030384 Quercus lobata HOM05D007727 ORTHO05D009078 5.1e-57 224.6 144 79.2
CiPaw.11G121100 Carya illinoinensis HOM05D007727 ORTHO05D009078 5.1e-33 144.8 153 57.5
CiPaw.12G082600 Carya illinoinensis HOM05D007727 ORTHO05D009078 7.4e-32 141.0 151 58.3
Cfa012003 Carpinus fangiana HOM05D007727 ORTHO05D009078 9.9e-29 130.6 148 55.4
Cfa012008 Carpinus fangiana HOM05D007727 ORTHO05D009078 9.9e-29 130.6 148 55.4
Haze_09065 Corylus avellana HOM05D007727 ORTHO05D009078 9.9e-29 130.6 148 55.4
Haze_09064 Corylus avellana HOM05D007727 ORTHO05D009078 1.7e-28 129.8 148 55.4
CiPaw.12G082800 Carya illinoinensis HOM05D007727 ORTHO05D009078 8.4e-28 127.5 135 57.8
Cfa012009 Carpinus fangiana HOM05D007727 ORTHO05D009078 8.7e-25 117.5 130 56.9
Duzib205G0888 Durio zibethinus HOM05D007727 ORTHO05D009078 4.9e-20 101.7 123 53.7
Potri.003G140200 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.9e-19 99.8 119 52.1
Potri.003G140233 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.9e-19 99.8 119 52.1
Potri.003G140266 Populus trichocarpa HOM05D007727 ORTHO05D009078 1.9e-19 99.8 119 52.1
Manes.02G009800 Manihot esculenta HOM05D007727 ORTHO05D009078 5.5e-19 98.2 147 43.5
Potri.001G091400 Populus trichocarpa HOM05D007727 ORTHO05D009078 9.3e-19 97.4 119 50.4
Potri.004G151000 Populus trichocarpa HOM05D007727 ORTHO05D009078 9.3e-19 97.4 119 50.4
Thecc.03G298300 Theobroma cacao HOM05D007727 ORTHO05D009078 9.3e-19 97.4 127 48.8
COL.COLO4_10705 Corchorus olitorius HOM05D007727 ORTHO05D009078 3.5e-18 95.5 133 46.6
Prupe.5G120300 Prunus persica HOM05D007727 ORTHO05D009078 3.5e-18 95.5 124 49.2
Gorai.004G133300 Gossypium raimondii HOM05D007727 ORTHO05D009078 7.9e-18 94.4 126 46.8
Dinv38830 Davidia involucrata HOM05D007727 ORTHO05D009078 2.3e-17 92.8 130 45.4
Gohir.D08G130400 Gossypium hirsutum HOM05D007727 ORTHO05D009078 3.0e-17 92.4 126 46.0
Hma1.2p1_1746F.1_g300420 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 3.9e-17 92.0 121 47.1
CSS0019090 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 6.7e-17 91.3 138 44.2
CSS0050195 Camellia sinensis var. sinensis HOM05D007727 ORTHO05D009078 8.7e-17 90.9 125 49.6
Sabra01G0067800 Salix brachista HOM05D007727 ORTHO05D009078 1.9e-16 89.7 119 49.6
Sabra01G0067700 Salix brachista HOM05D007727 ORTHO05D009078 4.3e-16 88.6 119 49.6
Glyma.05G216900 Glycine max HOM05D007727 ORTHO05D009078 2.2e-15 86.3 114 45.6
Gohir.D03G083800 Gossypium hirsutum HOM05D007727 ORTHO05D009078 2.2e-15 86.3 126 48.4
Gorai.003G078900 Gossypium raimondii HOM05D007727 ORTHO05D009078 2.2e-15 86.3 126 48.4
Glyma.08G023200 Glycine max HOM05D007727 ORTHO05D009078 2.8e-15 85.9 109 45.0
Hma1.2p1_1461F.1_g285070 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 3.7e-15 85.5 125 44.8
Rhsim02G0243900 Rhododendron simsii HOM05D007727 ORTHO05D009078 8.2e-15 84.3 119 46.2
Glyma.08G022800 Glycine max HOM05D007727 ORTHO05D009078 1.1e-14 84.0 114 45.6
Gohir.A02G100000 Gossypium hirsutum HOM05D007727 ORTHO05D009078 1.8e-14 83.2 126 46.8
Gohir.A08G103450 Gossypium hirsutum HOM05D007727 ORTHO05D009078 1.8e-14 83.2 114 43.9
Oeu031672.1 Olea europaea HOM05D007727 ORTHO05D009078 1.8e-14 83.2 106 46.2
Oeu031673.1 Olea europaea HOM05D007727 ORTHO05D009078 1.8e-14 83.2 106 47.2
Ciclev10022327m.g Citrus clementina HOM05D007727 ORTHO05D009078 3.1e-14 82.4 132 46.2
Hma1.2p1_1461F.1_g285060 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 4.1e-14 82.0 66 60.6
Hma1.2p1_2808F.1_g328866 Hydrangea macrophylla HOM05D007727 ORTHO05D009078 4.1e-14 82.0 66 60.6
LjContig00312_ERROPOS870357g0016151 Lotus japonicus HOM05D007727 ORTHO05D009078 5.3e-14 81.6 110 44.5
Rhsim02G0244000 Rhododendron simsii HOM05D007727 ORTHO05D009078 6.9e-14 81.3 119 45.4
Rhsim02G0243700 Rhododendron simsii HOM05D007727 ORTHO05D009078 1.5e-13 80.1 121 46.3
Eucgr.D01747 Eucalyptus grandis HOM05D007727 ORTHO05D009078 2.6e-13 79.3 125 40.8
VMungo1215G2373 Vigna mungo HOM05D007727 ORTHO05D009078 2.6e-13 79.3 110 41.8
Glyma.01G225500 Glycine max HOM05D007727 ORTHO05D009078 3.4e-13 79.0 108 43.5
Rhsim02G0243800 Rhododendron simsii HOM05D007727 ORTHO05D009078 5.9e-13 78.2 116 44.0
FvH4_5g04620 Fragaria vesca HOM05D007727 ORTHO05D009078 7.7e-13 77.8 133 44.4
FAN18G4426 Fragaria x ananassa HOM05D007727 ORTHO05D009078 7.7e-13 77.8 133 44.4
Glyma.05G217200 Glycine max HOM05D007727 ORTHO05D009078 7.7e-13 77.8 126 38.9
FAN13G2104 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.7e-12 76.6 138 42.8
FAN13G3265 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.7e-12 76.6 138 42.8
FAN18G0179 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.7e-12 76.6 133 42.9
Phvul.002G164400 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 1.7e-12 76.6 108 41.7
Eucgr.D01744 Eucalyptus grandis HOM05D007727 ORTHO05D009078 2.2e-12 76.3 122 42.6
Glyma.11G017500 Glycine max HOM05D007727 ORTHO05D009078 2.9e-12 75.9 112 43.8
Phvul.002G298200 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 3.8e-12 75.5 113 37.2
CANSAT21G1217 Cannabis sativa HOM05D007727 ORTHO05D009078 5.0e-12 75.1 76 55.3
Lj4g0015473 Lotus japonicus HOM05D007727 ORTHO05D009078 6.5e-12 74.7 113 41.6
Phvul.002G298600 Phaseolus vulgaris HOM05D007727 ORTHO05D009078 6.5e-12 74.7 110 37.3
Rhsim02G0243600 Rhododendron simsii HOM05D007727 ORTHO05D009078 6.5e-12 74.7 102 44.1
FAN08G2749 Fragaria x ananassa HOM05D007727 ORTHO05D009078 1.1e-11 73.9 133 42.9
FAN04G2059 Fragaria x ananassa HOM05D007727 ORTHO05D009078 3.2e-11 72.4 111 44.1
Eucgr.D01742 Eucalyptus grandis HOM05D007727 ORTHO05D009078 1.6e-10 70.1 64 59.4
MSTRG.25675 Avicennia marina HOM05D007727 ORTHO05D009078 2.1e-10 69.7 106 40.6
VMungo0251G2989 Vigna mungo HOM05D007727 ORTHO05D009078 4.6e-10 68.6 106 37.7
ECA240G1351 Erigeron canadensis HOM05D007727 ORTHO05D009078 7.9e-10 67.8 72 52.8
ClCG07G011610 Citrullus lanatus HOM05D007727 ORTHO05D009078 1.0e-09 67.4 100 39.0
Lalb_Chr05g0224131 Lupinus albus HOM05D007727 ORTHO05D009078 2.3e-09 66.2 116 38.8
TPR.G11121 Trifolium pratense HOM05D007727 ORTHO05D009078 3.9e-09 65.5 113 35.4
Medtr5g009290 Medicago truncatula HOM05D007727 ORTHO05D009078 1.5e-08 63.5 118 34.7
AUR62019842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 2.0e-08 63.2 82 48.8
AUR62010842 Chenopodium quinoa HOM05D007727 ORTHO05D009078 4.3e-08 62.0 45 64.4
PGSC0003DMG400012146 Solanum tuberosum HOM05D011491 ORTHO05D009078 4.3e-08 62.0 139 32.4
Medtr8g099485 Medicago truncatula HOM05D007727 ORTHO05D009078 5.7e-08 61.6 79 45.6
TPR.G25603 Trifolium pratense HOM05D007727 ORTHO05D009078 5.7e-08 61.6 124 35.5
Lj4g0008549 Lotus japonicus HOM05D007727 ORTHO05D009078 7.4e-08 61.2 106 36.8
Nitab4.5_0001210g0030 Nicotiana tabacum HOM05D011491 ORTHO05D009078 7.4e-08 61.2 118 35.6
TPR.G3394 Trifolium pratense HOM05D007727 ORTHO05D009078 9.7e-08 60.8 110 33.6
TPR.G3415 Trifolium pratense HOM05D007727 ORTHO05D009078 1.3e-07 60.5 66 47.0
Psat2g185360 Pisum sativum HOM05D007727 ORTHO05D009078 2.2e-07 59.7 148 33.1
PGSC0003DMG400012147 Solanum tuberosum HOM05D011491 ORTHO05D009078 2.2e-07 59.7 145 31.0
Sed0000706 Sechium edule HOM05D007727 ORTHO05D009078 2.8e-07 59.3 53 47.2
TPR.G3425 Trifolium pratense HOM05D007727 ORTHO05D009078 3.7e-07 58.9 58 46.6
CAN.G1804.6 Capsicum annuum HOM05D011491 ORTHO05D009078 4.8e-07 58.5 55 47.3
Nitab4.5_0002782g0050 Nicotiana tabacum HOM05D011491 ORTHO05D009078 4.8e-07 58.5 49 49.0
CsaV3_4G006600 Cucumis sativus L. HOM05D007727 ORTHO05D009078 6.3e-07 58.2 46 54.3
Sopen08g030640 Solanum pennellii HOM05D011491 ORTHO05D009078 6.3e-07 58.2 46 54.3
MELO3C016295.2 Cucumis melo HOM05D007727 ORTHO05D009078 8.2e-07 57.8 106 35.8
CAN.G1804.7 Capsicum annuum HOM05D011491 ORTHO05D009078 1.1e-06 57.4 55 47.3
TAR374G1599 Trochodendron aralioides HOM05D026466 ORTHO05D009078 3.1e-06 55.8 132 36.4
Nitab4.5_0002782g0020 Nicotiana tabacum HOM05D011491 ORTHO05D009078 4.1e-06 55.5 98 32.7
TAR374G1217 Trochodendron aralioides HOM05D026466 ORTHO05D009078 5.3e-06 55.1 136 35.3
Thhalv10026259m.g Eutrema salsugineum HOM05D009622 ORTHO05D011757 6.9e-06 54.7 55 43.6
BcaNung04083 Brassica carinata HOM05D009622 ORTHO05D011757 9.1e-06 54.3 48 43.8
BcaNung04240 Brassica carinata HOM05D009622 ORTHO05D011757 9.1e-06 54.3 48 43.8
C07p53170 Brassica napus HOM05D009622 ORTHO05D011757 9.1e-06 54.3 48 43.8
BolC7t45813H Brassica oleracea HOM05D009622 ORTHO05D011757 9.1e-06 54.3 48 43.8


User provided reference genes

Program Settings