Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p029889 Quercus lobata HOM05D002255 ORTHO05D002288 2.1e-109 399.4 260 100.0
QL02p029867 Quercus lobata HOM05D002255 ORTHO05D002288 1.5e-59 233.8 193 68.4
QL02p029894 Quercus lobata HOM05D002255 ORTHO05D002288 2.0e-59 233.4 219 61.6
QL02p029860 Quercus lobata HOM05D002255 ORTHO05D002288 3.5e-40 169.5 155 61.9
CiPaw.11G118700 Carya illinoinensis HOM05D002255 ORTHO05D002288 1.1e-25 121.3 151 51.0
CiPaw.12G081200 Carya illinoinensis HOM05D002255 ORTHO05D002288 1.4e-25 120.9 157 45.9
Haze_09094 Corylus avellana HOM05D002255 ORTHO05D002288 1.0e-20 104.8 145 45.5
QL02p029876 Quercus lobata HOM05D002255 ORTHO05D002288 2.0e-19 100.5 157 46.5
Cfa011979 Carpinus fangiana HOM05D002255 ORTHO05D002288 5.8e-19 99.0 145 44.1
Potri.001G089000 Populus trichocarpa HOM05D002255 ORTHO05D002288 7.5e-19 98.6 157 39.5
Thecc.03G301000 Theobroma cacao HOM05D002255 ORTHO05D002288 7.0e-17 92.0 152 39.5
FAN13G3015 Fragaria x ananassa HOM05D002255 ORTHO05D002288 6.0e-16 89.0 168 39.9
FAN18G0019 Fragaria x ananassa HOM05D002255 ORTHO05D002288 1.7e-15 87.4 168 39.3
Prupe.5G123000 Prunus persica HOM05D002255 ORTHO05D002288 1.7e-15 87.4 152 43.4
RcHm_v2.0_Chr7g0194121 Rosa chinensis HOM05D002255 ORTHO05D002288 2.3e-15 87.0 168 39.9
Sabra01G0065200 Salix brachista HOM05D002255 ORTHO05D002288 5.0e-15 85.9 157 34.4
FvH4_5g04950 Fragaria vesca HOM05D002255 ORTHO05D002288 6.6e-15 85.5 162 40.1
FAN08G1358 Fragaria x ananassa HOM05D002255 ORTHO05D002288 1.9e-14 84.0 168 39.9
COL.COLO4_10731 Corchorus olitorius HOM05D002255 ORTHO05D002288 4.3e-14 82.8 154 35.7
FAN18G0680 Fragaria x ananassa HOM05D002255 ORTHO05D002288 4.3e-14 82.8 140 42.1
Gohir.D03G084400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 1.2e-13 81.3 130 42.3
Gorai.003G078200 Gossypium raimondii HOM05D002255 ORTHO05D002288 1.2e-13 81.3 130 42.3
TWI60G0014 Tripterygium wilfordii HOM05D002255 ORTHO05D002288 1.6e-13 80.9 128 38.3
Atru.chr9.1928 Acer truncatum HOM05D002255 ORTHO05D002288 2.8e-13 80.1 167 31.1
Ciclev10023315m.g Citrus clementina HOM05D002255 ORTHO05D002288 2.8e-13 80.1 154 37.0
TPR.G3449 Trifolium pratense HOM05D002255 ORTHO05D002288 3.6e-13 79.7 137 38.7
Duzib205G1099 Durio zibethinus HOM05D002255 ORTHO05D002288 8.0e-13 78.6 152 36.2
Gohir.A02G099300 Gossypium hirsutum HOM05D002255 ORTHO05D002288 1.8e-12 77.4 134 40.3
Ca_17465_v3 Cicer arietinum L. HOM05D002255 ORTHO05D002288 4.0e-12 76.3 157 35.7
Medtr8g099655 Medicago truncatula HOM05D002255 ORTHO05D002288 4.0e-12 76.3 152 34.9
Lj4g0026828 Lotus japonicus HOM05D002255 ORTHO05D002288 5.2e-12 75.9 131 38.2
Nn1g00261 Nelumbo nucifera HOM05D002255 ORTHO05D002288 6.8e-12 75.5 148 34.5
Lalb_Chr05g0224011 Lupinus albus HOM05D002255 ORTHO05D002288 8.9e-12 75.1 133 36.8
CsaV3_4G006750 Cucumis sativus L. HOM05D002255 ORTHO05D002288 4.4e-11 72.8 139 36.7
FAN04G2345 Fragaria x ananassa HOM05D002255 ORTHO05D002288 4.4e-11 72.8 137 42.3
VMungo0251G1524 Vigna mungo HOM05D002255 ORTHO05D002288 5.8e-11 72.4 140 35.7
CSS0015495 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 7.5e-11 72.0 132 37.9
Phvul.002G300100 Phaseolus vulgaris HOM05D002255 ORTHO05D002288 7.5e-11 72.0 201 28.9
ClCG07G011470 Citrullus lanatus HOM05D002255 ORTHO05D002288 9.8e-11 71.6 130 37.7
Glyma.05G218300 Glycine max HOM05D002255 ORTHO05D002288 1.7e-10 70.9 145 34.5
Glyma.08G024400 Glycine max HOM05D002255 ORTHO05D002288 1.7e-10 70.9 141 36.2
Sed0012868 Sechium edule HOM05D002255 ORTHO05D002288 1.7e-10 70.9 140 37.1
Manes.02G008000 Manihot esculenta HOM05D002255 ORTHO05D002288 2.9e-10 70.1 145 32.4
Nn3g18976 Nelumbo nucifera HOM05D002255 ORTHO05D002288 2.9e-10 70.1 149 35.6
MELO3C016274.2 Cucumis melo HOM05D002255 ORTHO05D002288 3.7e-10 69.7 129 38.0
AUR62019868 Chenopodium quinoa HOM05D002255 ORTHO05D002288 1.1e-09 68.2 135 31.9
EL10Ac5g12942 Beta vulgaris HOM05D002255 ORTHO05D002288 1.4e-09 67.8 133 33.8
PSO384G0536 Papaver somniferum HOM05D002255 ORTHO05D002288 2.4e-09 67.0 166 27.1
Actinidia22177 Actinidia chinensis HOM05D002255 ORTHO05D002288 3.2e-09 66.6 140 37.1
PGR042G2287 Punica granatum HOM05D002255 ORTHO05D002288 4.1e-09 66.2 148 37.8
Gohir.A09G189700 Gossypium hirsutum HOM05D002255 ORTHO05D002288 2.1e-08 63.9 153 32.0
Gorai.006G206900 Gossypium raimondii HOM05D002255 ORTHO05D002288 6.0e-08 62.4 153 31.4
MD14G1131100 Malus domestica HOM05D002255 ORTHO05D002288 6.0e-08 62.4 215 29.3
CANSAT21G1974 Cannabis sativa HOM05D002255 ORTHO05D002288 7.8e-08 62.0 159 30.2
MD06G1110100 Malus domestica HOM05D002255 ORTHO05D002288 7.8e-08 62.0 215 28.8
Psat7g024880 Pisum sativum HOM05D002255 ORTHO05D002288 7.8e-08 62.0 132 35.6
CSS0048832 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 1.0e-07 61.6 141 34.0
Gohir.D09G184400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 1.0e-07 61.6 153 30.7
Hma1.2p1_0359F.1_g135100 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 3.0e-07 60.1 148 33.8
Eucgr.E00885 Eucalyptus grandis HOM05D002255 ORTHO05D002288 1.1e-06 58.2 156 30.8
ATR0602G057 Amborella trichopoda HOM05D002255 ORTHO05D002288 1.5e-06 57.8 150 28.7
Solyc08g008360.2 Solanum lycopersicum HOM05D002255 ORTHO05D002288 7.3e-06 55.5 131 33.6
Peaxi162Scf00102g01853 Petunia axillaris HOM05D002255 ORTHO05D002288 9.5e-06 55.1 131 34.4


User provided reference genes

Program Settings