Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL02p029876 Quercus lobata HOM05D002255 ORTHO05D002288 2.4e-105 385.6 206 100.0
QL02p029860 Quercus lobata HOM05D002255 ORTHO05D002288 1.0e-47 194.1 104 94.2
QL02p029894 Quercus lobata HOM05D002255 ORTHO05D002288 1.0e-34 151.0 165 57.0
QL02p029867 Quercus lobata HOM05D002255 ORTHO05D002288 2.5e-33 146.4 130 66.2
Atru.chr9.1928 Acer truncatum HOM05D002255 ORTHO05D002288 6.3e-29 131.7 105 64.8
CiPaw.12G081200 Carya illinoinensis HOM05D002255 ORTHO05D002288 6.3e-29 131.7 100 70.0
Ciclev10023315m.g Citrus clementina HOM05D002255 ORTHO05D002288 6.3e-29 131.7 104 66.3
Thecc.03G301000 Theobroma cacao HOM05D002255 ORTHO05D002288 3.1e-28 129.4 103 64.1
Duzib205G1099 Durio zibethinus HOM05D002255 ORTHO05D002288 9.2e-28 127.9 99 63.6
Potri.001G089000 Populus trichocarpa HOM05D002255 ORTHO05D002288 5.9e-27 125.2 97 68.0
Sabra01G0065200 Salix brachista HOM05D002255 ORTHO05D002288 7.8e-27 124.8 96 69.8
COL.COLO4_10731 Corchorus olitorius HOM05D002255 ORTHO05D002288 8.6e-26 121.3 100 61.0
Hma1.2p1_0359F.1_g135100 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 2.1e-24 116.7 97 60.8
CiPaw.11G118700 Carya illinoinensis HOM05D002255 ORTHO05D002288 2.8e-24 116.3 103 64.1
Eucgr.E00885 Eucalyptus grandis HOM05D002255 ORTHO05D002288 4.7e-24 115.5 92 60.9
Medtr8g099655 Medicago truncatula HOM05D002255 ORTHO05D002288 1.0e-23 114.4 104 60.6
Prupe.5G123000 Prunus persica HOM05D002255 ORTHO05D002288 1.0e-23 114.4 104 64.4
Psat7g024880 Pisum sativum HOM05D002255 ORTHO05D002288 1.2e-22 110.9 95 63.2
Lj4g0026828 Lotus japonicus HOM05D002255 ORTHO05D002288 1.5e-22 110.5 84 67.9
TPR.G3449 Trifolium pratense HOM05D002255 ORTHO05D002288 9.8e-22 107.8 86 64.0
Phvul.002G300100 Phaseolus vulgaris HOM05D002255 ORTHO05D002288 1.7e-21 107.1 114 57.0
Ca_17465_v3 Cicer arietinum L. HOM05D002255 ORTHO05D002288 2.2e-21 106.7 105 58.1
Nn3g18976 Nelumbo nucifera HOM05D002255 ORTHO05D002288 4.9e-21 105.5 89 60.7
Gohir.A09G189700 Gossypium hirsutum HOM05D002255 ORTHO05D002288 6.4e-21 105.1 105 58.1
Gohir.D09G184400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 6.4e-21 105.1 105 58.1
Cfa011979 Carpinus fangiana HOM05D002255 ORTHO05D002288 8.3e-21 104.8 81 71.6
Manes.02G008000 Manihot esculenta HOM05D002255 ORTHO05D002288 8.3e-21 104.8 74 66.2
DCAR_006522 Daucus carota HOM05D002255 ORTHO05D002288 1.1e-20 104.4 101 55.4
Nn1g00261 Nelumbo nucifera HOM05D002255 ORTHO05D002288 5.4e-20 102.1 102 57.8
VMungo0251G1524 Vigna mungo HOM05D002255 ORTHO05D002288 5.4e-20 102.1 118 54.2
QL02p029889 Quercus lobata HOM05D002255 ORTHO05D002288 1.2e-19 100.9 157 46.5
Gorai.006G206900 Gossypium raimondii HOM05D002255 ORTHO05D002288 2.0e-19 100.1 105 57.1
MBI06_g13416_MAGBIO Magnolia biondii HOM05D002255 ORTHO05D002288 2.7e-19 99.8 95 52.6
CSS0015495 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 3.5e-19 99.4 100 56.0
Glyma.05G218300 Glycine max HOM05D002255 ORTHO05D002288 4.6e-19 99.0 94 58.5
Lj2P163T54 Lonicera japonica HOM05D002255 ORTHO05D002288 3.0e-18 96.3 104 53.8
FAN04G2345 Fragaria x ananassa HOM05D002255 ORTHO05D002288 3.9e-18 95.9 105 58.1
MD06G1110100 Malus domestica HOM05D002255 ORTHO05D002288 5.0e-18 95.5 90 62.2
Actinidia22177 Actinidia chinensis HOM05D002255 ORTHO05D002288 8.6e-18 94.7 91 57.1
Rhsim02G0246900 Rhododendron simsii HOM05D002255 ORTHO05D002288 1.1e-17 94.4 83 62.7
FAN08G1358 Fragaria x ananassa HOM05D002255 ORTHO05D002288 1.9e-17 93.6 106 56.6
CANSAT21G1974 Cannabis sativa HOM05D002255 ORTHO05D002288 2.5e-17 93.2 93 55.9
FvH4_5g04950 Fragaria vesca HOM05D002255 ORTHO05D002288 2.5e-17 93.2 105 56.2
CSS0048832 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 4.3e-17 92.4 78 62.8
HanXRQChr17g0534981 Helianthus annuus HOM05D002255 ORTHO05D002288 5.6e-17 92.0 100 54.0
Peaxi162Scf00102g01853 Petunia axillaris HOM05D002255 ORTHO05D002288 5.6e-17 92.0 111 49.5
FAN18G0019 Fragaria x ananassa HOM05D002255 ORTHO05D002288 9.5e-17 91.3 105 56.2
Lsat_1_v5_gn_3_11301 Lactuca sativa HOM05D002255 ORTHO05D002288 1.6e-16 90.5 106 50.9
FAN13G3015 Fragaria x ananassa HOM05D002255 ORTHO05D002288 2.1e-16 90.1 105 55.2
Aqoxy7G00071 Aquilegia oxysepala HOM05D002255 ORTHO05D002288 2.8e-16 89.7 74 58.1
RcHm_v2.0_Chr7g0194121 Rosa chinensis HOM05D002255 ORTHO05D002288 2.8e-16 89.7 84 67.9
Glyma.08G024400 Glycine max HOM05D002255 ORTHO05D002288 4.7e-16 89.0 100 53.0
Gohir.D03G084400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 4.7e-16 89.0 77 61.0
Gorai.003G078200 Gossypium raimondii HOM05D002255 ORTHO05D002288 4.7e-16 89.0 77 61.0
Lalb_Chr05g0224011 Lupinus albus HOM05D002255 ORTHO05D002288 6.2e-16 88.6 90 56.7
MD14G1131100 Malus domestica HOM05D002255 ORTHO05D002288 1.1e-15 87.8 86 61.6
Gohir.A02G099300 Gossypium hirsutum HOM05D002255 ORTHO05D002288 1.4e-15 87.4 77 59.7
Solyc08g008360.2 Solanum lycopersicum HOM05D002255 ORTHO05D002288 1.4e-15 87.4 96 50.0
Sopen08g004240 Solanum pennellii HOM05D002255 ORTHO05D002288 1.4e-15 87.4 96 50.0
PGSC0003DMG400005843 Solanum tuberosum HOM05D002255 ORTHO05D002288 1.4e-15 87.4 96 50.0
ClCG07G011470 Citrullus lanatus HOM05D002255 ORTHO05D002288 1.8e-15 87.0 86 57.0
Haze_09094 Corylus avellana HOM05D002255 ORTHO05D002288 1.8e-15 87.0 63 71.4
ECA246G0612 Erigeron canadensis HOM05D002255 ORTHO05D002288 2.6e-14 83.2 106 48.1
PGR042G2287 Punica granatum HOM05D002255 ORTHO05D002288 7.5e-14 81.6 90 53.3
FAN18G0680 Fragaria x ananassa HOM05D002255 ORTHO05D002288 1.3e-13 80.9 98 51.0
CsaV3_4G006750 Cucumis sativus L. HOM05D002255 ORTHO05D002288 6.4e-13 78.6 85 52.9
PSO384G0536 Papaver somniferum HOM05D002255 ORTHO05D002288 1.1e-12 77.8 97 49.5
MELO3C016274.2 Cucumis melo HOM05D002255 ORTHO05D002288 4.1e-12 75.9 85 51.8
Cpa.g.sc634.4 Carica papaya HOM05D002255 ORTHO05D002288 5.4e-12 75.5 67 58.2
TWI60G0014 Tripterygium wilfordii HOM05D002255 ORTHO05D002288 3.5e-11 72.8 102 45.1
Sed0012868 Sechium edule HOM05D002255 ORTHO05D002288 4.6e-11 72.4 92 45.7
Nitab4.5_0002231g0100 Nicotiana tabacum HOM05D002255 ORTHO05D002288 1.7e-10 70.5 111 43.2
SGA_v2.0_scaffold111G31397 Striga asiatica HOM05D002255 ORTHO05D002288 1.1e-09 67.8 86 44.2
SEGI_10050 Sequoiadendron giganteum HOM05D002255 ORTHO05D002288 9.5e-09 64.7 107 36.4
SalBow8G1331 Salvia bowleyana HOM05D002255 ORTHO05D002288 2.8e-08 63.2 54 57.4
EL10Ac5g12942 Beta vulgaris HOM05D002255 ORTHO05D002288 3.1e-07 59.7 94 42.6
AUR62010866 Chenopodium quinoa HOM05D002255 ORTHO05D002288 6.8e-07 58.5 72 45.8
Ah.12g052770 Amaranthus hybridus HOM05D002255 ORTHO05D002288 8.9e-07 58.2 65 49.2
AUR62019868 Chenopodium quinoa HOM05D002255 ORTHO05D002288 1.5e-06 57.4 56 51.8
Migut.E01280 Erythranthe guttata HOM05D002255 ORTHO05D002288 4.4e-06 55.8 79 43.0


User provided reference genes

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